RNA–Protein interactions for RNA: ENST00000524086.5

MCM4-216, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 5

Gene MCM4, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-216ENST00000524086 DEFB116Q30KQ4 102 aa6.28□□□□□ -1.4
MCM4-216ENST00000524086 NOTCH2NLQ7Z3S9 236 aa6.28□□□□□ -1.4
MCM4-216ENST00000524086 DSCR8Q96T75 97 aa6.28□□□□□ -1.4
MCM4-216ENST00000524086 A0A1B0GVX0 72 aa6.27□□□□□ -1.41
MCM4-216ENST00000524086 TSTD3H0UI37 97 aa6.27□□□□□ -1.41
MCM4-216ENST00000524086 MT2AP02795 61 aa6.27□□□□□ -1.41
MCM4-216ENST00000524086 A0A1B0GV72 72 aa6.26□□□□□ -1.41
MCM4-216ENST00000524086 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
MCM4-216ENST00000524086 NDUFB1O75438 58 aa6.25□□□□□ -1.41
MCM4-216ENST00000524086 SCGB1C2P0DMR2 95 aa6.25□□□□□ -1.41
MCM4-216ENST00000524086 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
MCM4-216ENST00000524086 VPS25Q9BRG1 176 aa6.24□□□□□ -1.41
MCM4-216ENST00000524086 ZCCHC13Q8WW36 166 aaKnown RBP6.23□□□□□ -1.41
MCM4-216ENST00000524086 A0A1B0GW54 56 aa6.22□□□□□ -1.41
MCM4-216ENST00000524086 C9JAW5 83 aa6.22□□□□□ -1.41
MCM4-216ENST00000524086 K7ERJ3 54 aa6.21□□□□□ -1.42
MCM4-216ENST00000524086 MT1FP04733 61 aa6.21□□□□□ -1.42
MCM4-216ENST00000524086 SPINK7P58062 85 aa6.21□□□□□ -1.42
MCM4-216ENST00000524086 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
MCM4-216ENST00000524086 USH2AO75445 5202 aa6.2□□□□□ -1.42
MCM4-216ENST00000524086 M0R143 59 aa6.2□□□□□ -1.42
MCM4-216ENST00000524086 Q6ZQT0 140 aa6.19□□□□□ -1.42
MCM4-216ENST00000524086 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
MCM4-216ENST00000524086 LCE2BO14633 110 aa6.18□□□□□ -1.42
MCM4-216ENST00000524086 BAALC-AS2P0C853 105 aa6.18□□□□□ -1.42
MCM4-216ENST00000524086 LYRM7Q5U5X0 104 aa6.18□□□□□ -1.42
MCM4-216ENST00000524086 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
MCM4-216ENST00000524086 PDE6GP18545 87 aa6.17□□□□□ -1.42
MCM4-216ENST00000524086 BATFQ16520 125 aa6.17□□□□□ -1.42
MCM4-216ENST00000524086 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
MCM4-216ENST00000524086 A8MWP4 228 aa6.16□□□□□ -1.42
MCM4-216ENST00000524086 JMJD7-PLA2G4BH0Y9G9 81 aa6.16□□□□□ -1.42
MCM4-216ENST00000524086 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
MCM4-216ENST00000524086 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
MCM4-216ENST00000524086 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
MCM4-216ENST00000524086 FCGBPQ9Y6R7 5405 aaPredicted RBP6.11□□□□□ -1.43
MCM4-216ENST00000524086 LOC110117498A0A087WWA1 95 aa6.1□□□□□ -1.43
MCM4-216ENST00000524086 WFDC13Q8IUB5 93 aa6.1□□□□□ -1.43
MCM4-216ENST00000524086 Q6ZVQ6 151 aa6.09□□□□□ -1.43
MCM4-216ENST00000524086 IGKV3D-7A0A0C4DH55 119 aa6.08□□□□□ -1.44
MCM4-216ENST00000524086 NREPQ16612 68 aa6.07□□□□□ -1.44
MCM4-216ENST00000524086 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
MCM4-216ENST00000524086 NAA38Q9BRA0 125 aaKnown RBP6.07□□□□□ -1.44
MCM4-216ENST00000524086 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
MCM4-216ENST00000524086 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
MCM4-216ENST00000524086 C9orf118A6NHY6 69 aa6.03□□□□□ -1.44
MCM4-216ENST00000524086 TAX1BP3O14907 124 aa6.03□□□□□ -1.44
MCM4-216ENST00000524086 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
MCM4-216ENST00000524086 COL5A1-AS1Q5SY13 56 aa6.03□□□□□ -1.44
MCM4-216ENST00000524086 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
MCM4-216ENST00000524086 C14orf132Q9NPU4 83 aa6.01□□□□□ -1.45
MCM4-216ENST00000524086 hDV103S1A0JD37 113 aa5.99□□□□□ -1.45
MCM4-216ENST00000524086 A0A1W2PPM0 123 aa5.98□□□□□ -1.45
MCM4-216ENST00000524086 NDUFS5O43920 106 aa5.98□□□□□ -1.45
MCM4-216ENST00000524086 MACF1Q9UPN3 7388 aaKnown RBP5.96□□□□□ -1.45
MCM4-216ENST00000524086 MMP24-AS1A0A0U1RRL7 71 aa5.96□□□□□ -1.46
MCM4-216ENST00000524086 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
MCM4-216ENST00000524086 SPCS1Q9Y6A9 102 aa5.93□□□□□ -1.46
MCM4-216ENST00000524086 BPY2O14599 106 aa5.92□□□□□ -1.46
MCM4-216ENST00000524086 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
MCM4-216ENST00000524086 K7EQZ3 153 aa5.91□□□□□ -1.46
MCM4-216ENST00000524086 IGKV2-30P06310 120 aa5.91□□□□□ -1.46
MCM4-216ENST00000524086 H3BT86 120 aa5.9□□□□□ -1.46
MCM4-216ENST00000524086 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
MCM4-216ENST00000524086 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
MCM4-216ENST00000524086 K7EP34 96 aa5.87□□□□□ -1.47
MCM4-216ENST00000524086 CXCL6P80162 114 aa5.87□□□□□ -1.47
MCM4-216ENST00000524086 GTF2H5Q6ZYL4 71 aa5.87□□□□□ -1.47
MCM4-216ENST00000524086 CASC2Q6XLA1 102 aa5.86□□□□□ -1.47
MCM4-216ENST00000524086 Q5W150 140 aa5.85□□□□□ -1.47
MCM4-216ENST00000524086 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
MCM4-216ENST00000524086 C4orf26Q17RF5 130 aa5.82□□□□□ -1.48
MCM4-216ENST00000524086 FAM236AA0A1B0GUQ0 79 aa5.8□□□□□ -1.48
MCM4-216ENST00000524086 FAM236BA0A1B0GV22 79 aa5.8□□□□□ -1.48
MCM4-216ENST00000524086 SMCPP49901 116 aaPredicted RBP5.8□□□□□ -1.48
MCM4-216ENST00000524086 F8W1H4 67 aa5.79□□□□□ -1.48
MCM4-216ENST00000524086 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
MCM4-216ENST00000524086 PRO0461Q9UI25 63 aa5.79□□□□□ -1.48
MCM4-216ENST00000524086 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
MCM4-216ENST00000524086 UBL5Q9BZL1 73 aa5.77□□□□□ -1.49
MCM4-216ENST00000524086 A0A1B0GV90 55 aa5.76□□□□□ -1.49
MCM4-216ENST00000524086 Q8N9L7 120 aa5.76□□□□□ -1.49
MCM4-216ENST00000524086 S4R3F8 94 aa5.76□□□□□ -1.49
MCM4-216ENST00000524086 A6NN06 94 aa5.74□□□□□ -1.49
MCM4-216ENST00000524086 Q5VV11 94 aa5.74□□□□□ -1.49
MCM4-216ENST00000524086 TP53AIP1Q9HCN2 124 aa5.74□□□□□ -1.49
MCM4-216ENST00000524086 ETDBQ3ZM63 59 aa5.73□□□□□ -1.49
MCM4-216ENST00000524086 C1orf64Q8NEQ6 169 aa5.73□□□□□ -1.49
MCM4-216ENST00000524086 SPRR2GQ9BYE4 73 aa5.71□□□□□ -1.5
MCM4-216ENST00000524086 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
MCM4-216ENST00000524086 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
MCM4-216ENST00000524086 LCA10Q71F78 164 aa5.68□□□□□ -1.5
MCM4-216ENST00000524086 MT1BP07438 61 aa5.66□□□□□ -1.5
MCM4-216ENST00000524086 KLKP1Q107X0 134 aa5.65□□□□□ -1.5
MCM4-216ENST00000524086 CRIPTQ9P021 101 aa5.65□□□□□ -1.5
MCM4-216ENST00000524086 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
MCM4-216ENST00000524086 ACYP1P07311 99 aa5.58□□□□□ -1.52
MCM4-216ENST00000524086 IMUPQ9GZP8 106 aa5.58□□□□□ -1.52
MCM4-216ENST00000524086 CYP4F30PQ9H0H9 118 aa5.58□□□□□ -1.52
MCM4-216ENST00000524086 NEBP20929 6669 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 1054.7 ms