RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 KIAA1109Q2LD37 5005 aa11.92□□□□□ -0.5
SQLE-206ENST00000523430 LINC00304Q8N9R0 145 aa11.91□□□□□ -0.5
SQLE-206ENST00000523430 C1orf195Q5TG92 126 aa11.91□□□□□ -0.5
SQLE-206ENST00000523430 CYSTM1Q9H1C7 97 aa11.9□□□□□ -0.5
SQLE-206ENST00000523430 SPINK1P00995 79 aa11.89□□□□□ -0.51
SQLE-206ENST00000523430 C8orf17Q9NRJ1 99 aa11.89□□□□□ -0.51
SQLE-206ENST00000523430 C20orf197Q8N268 126 aa11.88□□□□□ -0.51
SQLE-206ENST00000523430 NOTCH2NLQ7Z3S9 236 aa11.87□□□□□ -0.51
SQLE-206ENST00000523430 hDV103S1A0JD37 113 aa11.86□□□□□ -0.51
SQLE-206ENST00000523430 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
SQLE-206ENST00000523430 RPS29P62273 56 aaKnown RBP11.8□□□□□ -0.52
SQLE-206ENST00000523430 SNURFQ9Y675 71 aa11.8□□□□□ -0.52
SQLE-206ENST00000523430 LRP1Q07954 4544 aaKnown RBP11.79□□□□□ -0.52
SQLE-206ENST00000523430 TMEM254Q8TBM7 123 aa11.78□□□□□ -0.52
SQLE-206ENST00000523430 KLKP1Q107X0 134 aa11.76□□□□□ -0.53
SQLE-206ENST00000523430 TNXBP22105 4242 aa11.75□□□□□ -0.53
SQLE-206ENST00000523430 Q8N1X5 172 aa11.74□□□□□ -0.53
SQLE-206ENST00000523430 MRPL34Q9BQ48 92 aaKnown RBP11.74□□□□□ -0.53
SQLE-206ENST00000523430 A0A0U1RQV1 116 aa11.72□□□□□ -0.53
SQLE-206ENST00000523430 C8orf87E5RJ46 101 aa11.72□□□□□ -0.53
SQLE-206ENST00000523430 FAT3Q8TDW7 4589 aa11.71□□□□□ -0.53
SQLE-206ENST00000523430 NDUFS5O43920 106 aa11.69□□□□□ -0.54
SQLE-206ENST00000523430 LINC00313P59037 77 aa11.69□□□□□ -0.54
SQLE-206ENST00000523430 C5orf47Q569G3 176 aa11.69□□□□□ -0.54
SQLE-206ENST00000523430 KRTAP10-8P60410 259 aa11.67□□□□□ -0.54
SQLE-206ENST00000523430 H7BZZ5 65 aa11.66□□□□□ -0.54
SQLE-206ENST00000523430 H0Y9P7 68 aa11.64□□□□□ -0.55
SQLE-206ENST00000523430 TP53AIP1Q9HCN2 124 aa11.63□□□□□ -0.55
SQLE-206ENST00000523430 KRTAP16-1A8MUX0 517 aa11.62□□□□□ -0.55
SQLE-206ENST00000523430 ZCCHC13Q8WW36 166 aaKnown RBP11.62□□□□□ -0.55
SQLE-206ENST00000523430 RETNLBQ9BQ08 111 aa11.62□□□□□ -0.55
SQLE-206ENST00000523430 TRAV22A0A0B4J277 110 aa11.61□□□□□ -0.55
SQLE-206ENST00000523430 MP68P56378 58 aa11.61□□□□□ -0.55
SQLE-206ENST00000523430 MYCBP2O75592 4640 aa11.6□□□□□ -0.55
SQLE-206ENST00000523430 TMEM258P61165 79 aa11.6□□□□□ -0.55
SQLE-206ENST00000523430 LINC00208Q96KT6 92 aa11.58□□□□□ -0.56
SQLE-206ENST00000523430 NDUFC1O43677 76 aa11.57□□□□□ -0.56
SQLE-206ENST00000523430 FLG2Q5D862 2391 aaPredicted RBP11.56□□□□□ -0.56
SQLE-206ENST00000523430 Q8N9P0 234 aaPredicted RBP11.55□□□□□ -0.56
SQLE-206ENST00000523430 MT1HL1P0DM35 61 aa11.53□□□□□ -0.56
SQLE-206ENST00000523430 KRTAP4-5Q9BYR2 181 aa11.53□□□□□ -0.56
SQLE-206ENST00000523430 Q5W150 140 aa11.52□□□□□ -0.57
SQLE-206ENST00000523430 C1orf64Q8NEQ6 169 aa11.52□□□□□ -0.57
SQLE-206ENST00000523430 H3BPC8 53 aa11.51□□□□□ -0.57
SQLE-206ENST00000523430 FAM236DA0A1B0GTK5 79 aa11.49□□□□□ -0.57
SQLE-206ENST00000523430 FAM236CP0DP71 79 aa11.49□□□□□ -0.57
SQLE-206ENST00000523430 KRTAP13-3Q3SY46 172 aa11.49□□□□□ -0.57
SQLE-206ENST00000523430 C9orf92A6NGG3 77 aa11.48□□□□□ -0.57
SQLE-206ENST00000523430 BIRC6Q9NR09 4857 aa11.42□□□□□ -0.58
SQLE-206ENST00000523430 OXTP01178 125 aa11.37□□□□□ -0.59
SQLE-206ENST00000523430 ABCA13Q86UQ4 5058 aa11.36□□□□□ -0.59
SQLE-206ENST00000523430 PCOTHQ58A44 107 aa11.36□□□□□ -0.59
SQLE-206ENST00000523430 ATP5EP56381 51 aaPredicted RBP11.35□□□□□ -0.59
SQLE-206ENST00000523430 LOC101927531A0A1B0GV80 90 aa11.34□□□□□ -0.59
SQLE-206ENST00000523430 HERC2O95714 4834 aa11.34□□□□□ -0.59
SQLE-206ENST00000523430 FP248Q71RG6 208 aaPredicted RBP11.33□□□□□ -0.6
SQLE-206ENST00000523430 PRR4Q16378 134 aa11.32□□□□□ -0.6
SQLE-206ENST00000523430 C20orf166-AS1Q96NR2 134 aa11.32□□□□□ -0.6
SQLE-206ENST00000523430 DMBT1Q9UGM3 2413 aaPredicted RBP11.31□□□□□ -0.6
SQLE-206ENST00000523430 A8MUU9 505 aa11.31□□□□□ -0.6
SQLE-206ENST00000523430 CYP4F30PQ9H0H9 118 aa11.29□□□□□ -0.6
SQLE-206ENST00000523430 IGLV7-46A0A075B6I9 117 aa11.27□□□□□ -0.61
SQLE-206ENST00000523430 IGKV2-30P06310 120 aa11.26□□□□□ -0.61
SQLE-206ENST00000523430 SPANXA2-OT1Q8N9U9 137 aa11.25□□□□□ -0.61
SQLE-206ENST00000523430 SERP1Q9Y6X1 66 aa11.24□□□□□ -0.61
SQLE-206ENST00000523430 RPS28P62857 69 aaKnown RBP11.23□□□□□ -0.61
SQLE-206ENST00000523430 IGKV2D-30A0A075B6S6 120 aa11.21□□□□□ -0.61
SQLE-206ENST00000523430 Q75L30 129 aa11.19□□□□□ -0.62
SQLE-206ENST00000523430 XP32Q5T750 250 aa11.14□□□□□ -0.63
SQLE-206ENST00000523430 HRES1P13985 223 aa11.13□□□□□ -0.63
SQLE-206ENST00000523430 C7orf65Q6ZTY9 151 aa11.1□□□□□ -0.63
SQLE-206ENST00000523430 J3QL48 77 aa11.09□□□□□ -0.63
SQLE-206ENST00000523430 RPL37P61927 97 aaKnown RBP11.08□□□□□ -0.64
SQLE-206ENST00000523430 TPRXLQ17RH7 258 aa11.03□□□□□ -0.64
SQLE-206ENST00000523430 ATP11AUNQ6ZP68 121 aa11.01□□□□□ -0.65
SQLE-206ENST00000523430 LPAP08519 4548 aa11□□□□□ -0.65
SQLE-206ENST00000523430 COA5Q86WW8 74 aa10.99□□□□□ -0.65
SQLE-206ENST00000523430 SPINK7P58062 85 aa10.98□□□□□ -0.65
SQLE-206ENST00000523430 DMAC1Q96GE9 116 aa10.98□□□□□ -0.65
SQLE-206ENST00000523430 SMIM26A0A096LP01 95 aa10.94□□□□□ -0.66
SQLE-206ENST00000523430 PCLOQ9Y6V0 5065 aa10.92□□□□□ -0.66
SQLE-206ENST00000523430 C4orf26Q17RF5 130 aa10.91□□□□□ -0.66
SQLE-206ENST00000523430 LRP2P98164 4655 aa10.91□□□□□ -0.66
SQLE-206ENST00000523430 ACYP2P14621 99 aa10.87□□□□□ -0.67
SQLE-206ENST00000523430 MPLKIPQ8TAP9 179 aa10.83□□□□□ -0.68
SQLE-206ENST00000523430 KRTAP3-1Q9BYR8 98 aa10.77□□□□□ -0.69
SQLE-206ENST00000523430 A8MUN3 132 aa10.76□□□□□ -0.69
SQLE-206ENST00000523430 CHKB-CPT1BH3BT56 60 aa10.75□□□□□ -0.69
SQLE-206ENST00000523430 Q1T7F1 81 aa10.71□□□□□ -0.69
SQLE-206ENST00000523430 COX6B2Q6YFQ2 88 aa10.7□□□□□ -0.7
SQLE-206ENST00000523430 HERC1Q15751 4861 aa10.69□□□□□ -0.7
SQLE-206ENST00000523430 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
SQLE-206ENST00000523430 HMCN2Q8NDA2 5059 aa10.6□□□□□ -0.71
SQLE-206ENST00000523430 V9GYY9 64 aa10.6□□□□□ -0.71
SQLE-206ENST00000523430 PSPHP1O15172 72 aa10.59□□□□□ -0.71
SQLE-206ENST00000523430 MUC17Q685J3 4493 aa10.56□□□□□ -0.72
SQLE-206ENST00000523430 LINC01558Q9Y6Z2 57 aa10.55□□□□□ -0.72
SQLE-206ENST00000523430 PRR15LQ9BU68 103 aa10.54□□□□□ -0.72
SQLE-206ENST00000523430 KRTAP4-1Q9BYQ7 146 aa10.5□□□□□ -0.73
SQLE-206ENST00000523430 Q5VV11 94 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms