RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 SERP2Q8N6R1 65 aa4.08□□□□□ -1.76
CSMD1-211ENST00000523062 Q8N9L7 120 aa4.08□□□□□ -1.76
CSMD1-211ENST00000523062 RYR2Q92736 4967 aa4.08□□□□□ -1.76
CSMD1-211ENST00000523062 SACSQ9NZJ4 4579 aa4.08□□□□□ -1.76
CSMD1-211ENST00000523062 SS18L2Q9UHA2 77 aa4.08□□□□□ -1.76
CSMD1-211ENST00000523062 CCDC179H3BU77 68 aa4.07□□□□□ -1.76
CSMD1-211ENST00000523062 UQCRQO14949 82 aa4.07□□□□□ -1.76
CSMD1-211ENST00000523062 FAM229BQ4G0N7 80 aa4.07□□□□□ -1.76
CSMD1-211ENST00000523062 KRTAP4-4Q9BYR3 166 aa4.07□□□□□ -1.76
CSMD1-211ENST00000523062 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
CSMD1-211ENST00000523062 J3KT08 172 aa4.06□□□□□ -1.76
CSMD1-211ENST00000523062 K7EQZ3 153 aa4.06□□□□□ -1.76
CSMD1-211ENST00000523062 SSBP3-AS1Q7Z2R9 100 aa4.06□□□□□ -1.76
CSMD1-211ENST00000523062 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
CSMD1-211ENST00000523062 TRAV7A0A075B6U4 112 aa4.05□□□□□ -1.76
CSMD1-211ENST00000523062 CD164Q04900 197 aa4.05□□□□□ -1.76
CSMD1-211ENST00000523062 A8MWP4 228 aa4.04□□□□□ -1.76
CSMD1-211ENST00000523062 DEFB116Q30KQ4 102 aa4.04□□□□□ -1.76
CSMD1-211ENST00000523062 HRCT1Q6UXD1 115 aa4.04□□□□□ -1.76
CSMD1-211ENST00000523062 PKD1P98161 4303 aa4.04□□□□□ -1.76
CSMD1-211ENST00000523062 HCG22E2RYF7 251 aa4.03□□□□□ -1.76
CSMD1-211ENST00000523062 SPINK6Q6UWN8 80 aa4.03□□□□□ -1.76
CSMD1-211ENST00000523062 SRRM2Q9UQ35 2752 aaKnown RBP4.03□□□□□ -1.76
CSMD1-211ENST00000523062 KRTAP1-4P0C5Y4 121 aa4.02□□□□□ -1.77
CSMD1-211ENST00000523062 PRR15Q8IV56 129 aa4.02□□□□□ -1.77
CSMD1-211ENST00000523062 Q96NJ1 140 aa4.02□□□□□ -1.77
CSMD1-211ENST00000523062 A0A087X002 238 aa4.01□□□□□ -1.77
CSMD1-211ENST00000523062 NDUFB1O75438 58 aa4.01□□□□□ -1.77
CSMD1-211ENST00000523062 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
CSMD1-211ENST00000523062 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
CSMD1-211ENST00000523062 CDK2AP2O75956 126 aa4□□□□□ -1.77
CSMD1-211ENST00000523062 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
CSMD1-211ENST00000523062 OCR1Q9BZK8 76 aa4□□□□□ -1.77
CSMD1-211ENST00000523062 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
CSMD1-211ENST00000523062 LRP1BQ9NZR2 4599 aa3.99□□□□□ -1.77
CSMD1-211ENST00000523062 SMR3BP02814 79 aaPredicted RBP3.99□□□□□ -1.77
CSMD1-211ENST00000523062 Q5XG85 94 aa3.99□□□□□ -1.77
CSMD1-211ENST00000523062 CASC2Q6XLA1 102 aa3.99□□□□□ -1.77
CSMD1-211ENST00000523062 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
CSMD1-211ENST00000523062 A0A1B0GVX0 72 aa3.98□□□□□ -1.77
CSMD1-211ENST00000523062 C20orf197Q8N268 126 aa3.98□□□□□ -1.77
CSMD1-211ENST00000523062 TYMSOSQ8TAI1 123 aa3.98□□□□□ -1.77
CSMD1-211ENST00000523062 LIMD2Q9BT23 127 aa3.98□□□□□ -1.77
CSMD1-211ENST00000523062 PKHD1P08F94 4074 aa3.98□□□□□ -1.77
CSMD1-211ENST00000523062 MMP24-AS1A0A0U1RRL7 71 aa3.97□□□□□ -1.77
CSMD1-211ENST00000523062 IGKV2-30P06310 120 aa3.97□□□□□ -1.77
CSMD1-211ENST00000523062 KRTAP10-4P60372 401 aaPredicted RBP3.97□□□□□ -1.77
CSMD1-211ENST00000523062 C8orf17Q9NRJ1 99 aa3.97□□□□□ -1.77
CSMD1-211ENST00000523062 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
CSMD1-211ENST00000523062 TMEM254Q8TBM7 123 aa3.96□□□□□ -1.78
CSMD1-211ENST00000523062 VPS13BQ7Z7G8 4022 aa3.96□□□□□ -1.78
CSMD1-211ENST00000523062 IGHV6-1A0A0B4J1U7 121 aa3.95□□□□□ -1.78
CSMD1-211ENST00000523062 hDV103S1A0JD37 113 aa3.95□□□□□ -1.78
CSMD1-211ENST00000523062 SPINK1P00995 79 aa3.95□□□□□ -1.78
CSMD1-211ENST00000523062 C8orf87E5RJ46 101 aa3.94□□□□□ -1.78
CSMD1-211ENST00000523062 TMEM258P61165 79 aa3.94□□□□□ -1.78
CSMD1-211ENST00000523062 RPS29P62273 56 aaKnown RBP3.94□□□□□ -1.78
CSMD1-211ENST00000523062 SPAG11AQ6PDA7 123 aa3.94□□□□□ -1.78
CSMD1-211ENST00000523062 PRR26Q8N8Z3 221 aa3.94□□□□□ -1.78
CSMD1-211ENST00000523062 LINC00304Q8N9R0 145 aa3.94□□□□□ -1.78
CSMD1-211ENST00000523062 CYSTM1Q9H1C7 97 aa3.94□□□□□ -1.78
CSMD1-211ENST00000523062 RYR1P21817 5038 aa3.94□□□□□ -1.78
CSMD1-211ENST00000523062 A0A0U1RQV1 116 aa3.93□□□□□ -1.78
CSMD1-211ENST00000523062 NDUFC1O43677 76 aa3.93□□□□□ -1.78
CSMD1-211ENST00000523062 C5orf47Q569G3 176 aa3.93□□□□□ -1.78
CSMD1-211ENST00000523062 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
CSMD1-211ENST00000523062 SNURFQ9Y675 71 aa3.93□□□□□ -1.78
CSMD1-211ENST00000523062 APOBP04114 4563 aaKnown RBP3.93□□□□□ -1.78
CSMD1-211ENST00000523062 MP68P56378 58 aa3.92□□□□□ -1.78
CSMD1-211ENST00000523062 TP53AIP1Q9HCN2 124 aa3.92□□□□□ -1.78
CSMD1-211ENST00000523062 H3BPC8 53 aa3.91□□□□□ -1.78
CSMD1-211ENST00000523062 H7BZZ5 65 aa3.91□□□□□ -1.78
CSMD1-211ENST00000523062 Q5VSD8 79 aa3.91□□□□□ -1.78
CSMD1-211ENST00000523062 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
CSMD1-211ENST00000523062 TRAV22A0A0B4J277 110 aa3.89□□□□□ -1.79
CSMD1-211ENST00000523062 FAM236DA0A1B0GTK5 79 aa3.89□□□□□ -1.79
CSMD1-211ENST00000523062 H0Y9P7 68 aa3.89□□□□□ -1.79
CSMD1-211ENST00000523062 FAM236CP0DP71 79 aa3.89□□□□□ -1.79
CSMD1-211ENST00000523062 NOTCH2NLQ7Z3S9 236 aa3.89□□□□□ -1.79
CSMD1-211ENST00000523062 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
CSMD1-211ENST00000523062 NDUFS5O43920 106 aa3.88□□□□□ -1.79
CSMD1-211ENST00000523062 ATP5EP56381 51 aaPredicted RBP3.88□□□□□ -1.79
CSMD1-211ENST00000523062 LINC00313P59037 77 aa3.88□□□□□ -1.79
CSMD1-211ENST00000523062 PKHD1L1Q86WI1 4243 aa3.87□□□□□ -1.79
CSMD1-211ENST00000523062 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
CSMD1-211ENST00000523062 HERC2O95714 4834 aa3.85□□□□□ -1.79
CSMD1-211ENST00000523062 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
CSMD1-211ENST00000523062 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.79
CSMD1-211ENST00000523062 FAT1Q14517 4588 aa3.83□□□□□ -1.8
CSMD1-211ENST00000523062 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
CSMD1-211ENST00000523062 LOC101927531A0A1B0GV80 90 aa3.82□□□□□ -1.8
CSMD1-211ENST00000523062 KRTAP10-8P60410 259 aa3.82□□□□□ -1.8
CSMD1-211ENST00000523062 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
CSMD1-211ENST00000523062 HSPG2P98160 4391 aa3.81□□□□□ -1.8
CSMD1-211ENST00000523062 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
CSMD1-211ENST00000523062 SPANXA2-OT1Q8N9U9 137 aa3.8□□□□□ -1.8
CSMD1-211ENST00000523062 Q5W150 140 aa3.79□□□□□ -1.8
CSMD1-211ENST00000523062 CYP4F30PQ9H0H9 118 aa3.79□□□□□ -1.8
CSMD1-211ENST00000523062 FLG2Q5D862 2391 aaPredicted RBP3.78□□□□□ -1.8
CSMD1-211ENST00000523062 PCOTHQ58A44 107 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms