RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 SMR3BP02814 79 aaPredicted RBP15□□□□□ -0.01
COL13A1-214ENST00000522165 Q5XG85 94 aa15□□□□□ -0.01
COL13A1-214ENST00000522165 ZCCHC13Q8WW36 166 aaKnown RBP15□□□□□ -0.01
COL13A1-214ENST00000522165 APOBP04114 4563 aaKnown RBP14.98□□□□□ -0.01
COL13A1-214ENST00000522165 MP68P56378 58 aa14.94□□□□□ -0.02
COL13A1-214ENST00000522165 NOTCH2NLQ7Z3S9 236 aa14.94□□□□□ -0.02
COL13A1-214ENST00000522165 SERP1Q9Y6X1 66 aa14.92□□□□□ -0.02
COL13A1-214ENST00000522165 TYMSOSQ8TAI1 123 aa14.91□□□□□ -0.02
COL13A1-214ENST00000522165 C4orf26Q17RF5 130 aa14.9□□□□□ -0.02
COL13A1-214ENST00000522165 H0Y9P7 68 aa14.89□□□□□ -0.03
COL13A1-214ENST00000522165 C1orf195Q5TG92 126 aa14.88□□□□□ -0.03
COL13A1-214ENST00000522165 ATP5EP56381 51 aaPredicted RBP14.88□□□□□ -0.03
COL13A1-214ENST00000522165 KRTAP10-4P60372 401 aaPredicted RBP14.88□□□□□ -0.03
COL13A1-214ENST00000522165 MRPL34Q9BQ48 92 aaKnown RBP14.88□□□□□ -0.03
COL13A1-214ENST00000522165 TP53AIP1Q9HCN2 124 aa14.87□□□□□ -0.03
COL13A1-214ENST00000522165 LIMD2Q9BT23 127 aa14.86□□□□□ -0.03
COL13A1-214ENST00000522165 LINC00208Q96KT6 92 aa14.86□□□□□ -0.03
COL13A1-214ENST00000522165 H3BPC8 53 aa14.85□□□□□ -0.03
COL13A1-214ENST00000522165 C4orf48Q5BLP8 95 aa14.84□□□□□ -0.03
COL13A1-214ENST00000522165 FAT1Q14517 4588 aa14.83□□□□□ -0.03
COL13A1-214ENST00000522165 TRAV22A0A0B4J277 110 aa14.83□□□□□ -0.04
COL13A1-214ENST00000522165 PRR26Q8N8Z3 221 aa14.82□□□□□ -0.04
COL13A1-214ENST00000522165 C8orf87E5RJ46 101 aa14.8□□□□□ -0.04
COL13A1-214ENST00000522165 NDUFS5O43920 106 aa14.8□□□□□ -0.04
COL13A1-214ENST00000522165 SPINK1P00995 79 aa14.8□□□□□ -0.04
COL13A1-214ENST00000522165 C1orf64Q8NEQ6 169 aa14.76□□□□□ -0.05
COL13A1-214ENST00000522165 LINC00304Q8N9R0 145 aa14.73□□□□□ -0.05
COL13A1-214ENST00000522165 LINC00313P59037 77 aa14.72□□□□□ -0.05
COL13A1-214ENST00000522165 SMIM26A0A096LP01 95 aa14.7□□□□□ -0.06
COL13A1-214ENST00000522165 RPS29P62273 56 aaKnown RBP14.68□□□□□ -0.06
COL13A1-214ENST00000522165 SPAG11AQ6PDA7 123 aa14.68□□□□□ -0.06
COL13A1-214ENST00000522165 RYR3Q15413 4870 aa14.64□□□□□ -0.07
COL13A1-214ENST00000522165 PKHD1L1Q86WI1 4243 aa14.62□□□□□ -0.07
COL13A1-214ENST00000522165 FP248Q71RG6 208 aaPredicted RBP14.62□□□□□ -0.07
COL13A1-214ENST00000522165 Q8N9P0 234 aaPredicted RBP14.59□□□□□ -0.07
COL13A1-214ENST00000522165 KRTAP16-1A8MUX0 517 aa14.58□□□□□ -0.08
COL13A1-214ENST00000522165 Q5W150 140 aa14.58□□□□□ -0.08
COL13A1-214ENST00000522165 CYP4F30PQ9H0H9 118 aa14.58□□□□□ -0.08
COL13A1-214ENST00000522165 KRTAP13-3Q3SY46 172 aa14.57□□□□□ -0.08
COL13A1-214ENST00000522165 SPANXA2-OT1Q8N9U9 137 aa14.57□□□□□ -0.08
COL13A1-214ENST00000522165 FAM229AH3BQW9 127 aa14.56□□□□□ -0.08
COL13A1-214ENST00000522165 PRR4Q16378 134 aa14.56□□□□□ -0.08
COL13A1-214ENST00000522165 PRO0628Q9UI54 55 aa14.55□□□□□ -0.08
COL13A1-214ENST00000522165 HSPG2P98160 4391 aa14.51□□□□□ -0.09
COL13A1-214ENST00000522165 PCOTHQ58A44 107 aa14.5□□□□□ -0.09
COL13A1-214ENST00000522165 LOC101927531A0A1B0GV80 90 aa14.48□□□□□ -0.09
COL13A1-214ENST00000522165 Q5VSD8 79 aa14.45□□□□□ -0.1
COL13A1-214ENST00000522165 IGLV7-46A0A075B6I9 117 aa14.43□□□□□ -0.1
COL13A1-214ENST00000522165 RYR1P21817 5038 aa14.4□□□□□ -0.1
COL13A1-214ENST00000522165 RETNLBQ9BQ08 111 aa14.37□□□□□ -0.11
COL13A1-214ENST00000522165 KRTAP10-8P60410 259 aa14.29□□□□□ -0.12
COL13A1-214ENST00000522165 KRTAP17-1Q9BYP8 105 aa14.29□□□□□ -0.12
COL13A1-214ENST00000522165 TNXBP22105 4242 aa14.28□□□□□ -0.12
COL13A1-214ENST00000522165 IGKV2-30P06310 120 aa14.27□□□□□ -0.12
COL13A1-214ENST00000522165 Q8N1X5 172 aa14.27□□□□□ -0.12
COL13A1-214ENST00000522165 LRP1Q07954 4544 aaKnown RBP14.26□□□□□ -0.13
COL13A1-214ENST00000522165 FLG2Q5D862 2391 aaPredicted RBP14.25□□□□□ -0.13
COL13A1-214ENST00000522165 MPLKIPQ8TAP9 179 aa14.22□□□□□ -0.13
COL13A1-214ENST00000522165 C9orf92A6NGG3 77 aa14.21□□□□□ -0.14
COL13A1-214ENST00000522165 BRK1Q8WUW1 75 aa14.19□□□□□ -0.14
COL13A1-214ENST00000522165 KIAA1109Q2LD37 5005 aa14.19□□□□□ -0.14
COL13A1-214ENST00000522165 COA5Q86WW8 74 aa14.19□□□□□ -0.14
COL13A1-214ENST00000522165 HRES1P13985 223 aa14.16□□□□□ -0.14
COL13A1-214ENST00000522165 FAT3Q8TDW7 4589 aa14.14□□□□□ -0.15
COL13A1-214ENST00000522165 Q1T7F1 81 aa14.14□□□□□ -0.15
COL13A1-214ENST00000522165 C20orf166-AS1Q96NR2 134 aa14.14□□□□□ -0.15
COL13A1-214ENST00000522165 A8MUU9 505 aa14.13□□□□□ -0.15
COL13A1-214ENST00000522165 IGKV2D-30A0A075B6S6 120 aa14.13□□□□□ -0.15
COL13A1-214ENST00000522165 EPPK1P58107 5090 aaKnown RBP14.1□□□□□ -0.15
COL13A1-214ENST00000522165 DMAC1Q96GE9 116 aa14.03□□□□□ -0.16
COL13A1-214ENST00000522165 C7orf65Q6ZTY9 151 aa14□□□□□ -0.17
COL13A1-214ENST00000522165 ACYP2P14621 99 aa13.99□□□□□ -0.17
COL13A1-214ENST00000522165 MT1HL1P0DM35 61 aa13.99□□□□□ -0.17
COL13A1-214ENST00000522165 V9GYY9 64 aa13.96□□□□□ -0.17
COL13A1-214ENST00000522165 DMBT1Q9UGM3 2413 aaPredicted RBP13.95□□□□□ -0.18
COL13A1-214ENST00000522165 Q75L30 129 aa13.94□□□□□ -0.18
COL13A1-214ENST00000522165 MYCBP2O75592 4640 aa13.93□□□□□ -0.18
COL13A1-214ENST00000522165 PSPHP1O15172 72 aa13.86□□□□□ -0.19
COL13A1-214ENST00000522165 A8MUN3 132 aa13.81□□□□□ -0.2
COL13A1-214ENST00000522165 CHKB-CPT1BH3BT56 60 aa13.79□□□□□ -0.2
COL13A1-214ENST00000522165 SPINK7P58062 85 aa13.76□□□□□ -0.21
COL13A1-214ENST00000522165 KRTAP4-5Q9BYR2 181 aa13.76□□□□□ -0.21
COL13A1-214ENST00000522165 LINC01558Q9Y6Z2 57 aa13.75□□□□□ -0.21
COL13A1-214ENST00000522165 PRR15LQ9BU68 103 aa13.73□□□□□ -0.21
COL13A1-214ENST00000522165 Q5VV11 94 aa13.73□□□□□ -0.21
COL13A1-214ENST00000522165 XP32Q5T750 250 aa13.72□□□□□ -0.21
COL13A1-214ENST00000522165 RPL37P61927 97 aaKnown RBP13.71□□□□□ -0.21
COL13A1-214ENST00000522165 ATP11AUNQ6ZP68 121 aa13.7□□□□□ -0.22
COL13A1-214ENST00000522165 PMAIP1Q13794 54 aa13.66□□□□□ -0.22
COL13A1-214ENST00000522165 SEC61GP60059 68 aa13.57□□□□□ -0.24
COL13A1-214ENST00000522165 KRTAP3-1Q9BYR8 98 aa13.57□□□□□ -0.24
COL13A1-214ENST00000522165 TPRXLQ17RH7 258 aa13.5□□□□□ -0.25
COL13A1-214ENST00000522165 A8MU10 97 aa13.48□□□□□ -0.25
COL13A1-214ENST00000522165 COX6B2Q6YFQ2 88 aa13.48□□□□□ -0.25
COL13A1-214ENST00000522165 ABCA13Q86UQ4 5058 aa13.44□□□□□ -0.26
COL13A1-214ENST00000522165 A6NED7 52 aa13.4□□□□□ -0.27
COL13A1-214ENST00000522165 LCA10Q71F78 164 aa13.39□□□□□ -0.27
COL13A1-214ENST00000522165 A0A1B0GU69 56 aa13.38□□□□□ -0.27
COL13A1-214ENST00000522165 BIRC6Q9NR09 4857 aa13.37□□□□□ -0.27
COL13A1-214ENST00000522165 SPTSSBQ8NFR3 76 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms