RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TEN1Q86WV5 123 aa4.72□□□□□ -1.65
VPS13B-210ENST00000521932 TRBV7-7A0A0K0K1E9 115 aa4.71□□□□□ -1.66
VPS13B-210ENST00000521932 K7EP34 96 aa4.71□□□□□ -1.66
VPS13B-210ENST00000521932 OBSCN-AS1Q96MR7 158 aa4.71□□□□□ -1.66
VPS13B-210ENST00000521932 RETNLBQ9BQ08 111 aa4.71□□□□□ -1.66
VPS13B-210ENST00000521932 A0A1W2PNM2 257 aa4.7□□□□□ -1.66
VPS13B-210ENST00000521932 ASB16-AS1Q495Z4 193 aa4.7□□□□□ -1.66
VPS13B-210ENST00000521932 FP248Q71RG6 208 aaPredicted RBP4.7□□□□□ -1.66
VPS13B-210ENST00000521932 DSCR8Q96T75 97 aa4.7□□□□□ -1.66
VPS13B-210ENST00000521932 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
VPS13B-210ENST00000521932 PRR4Q16378 134 aa4.69□□□□□ -1.66
VPS13B-210ENST00000521932 GTF2H5Q6ZYL4 71 aa4.69□□□□□ -1.66
VPS13B-210ENST00000521932 A0A1B0GV72 72 aa4.68□□□□□ -1.66
VPS13B-210ENST00000521932 PDE6GP18545 87 aa4.68□□□□□ -1.66
VPS13B-210ENST00000521932 KRTAP10-6P60371 365 aaPredicted RBP4.68□□□□□ -1.66
VPS13B-210ENST00000521932 MTURNQ8N3F0 131 aa4.68□□□□□ -1.66
VPS13B-210ENST00000521932 PRO0461Q9UI25 63 aa4.68□□□□□ -1.66
VPS13B-210ENST00000521932 LPAP08519 4548 aa4.67□□□□□ -1.66
VPS13B-210ENST00000521932 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
VPS13B-210ENST00000521932 LOC110117498A0A087WWA1 95 aa4.67□□□□□ -1.66
VPS13B-210ENST00000521932 CCKP06307 115 aa4.67□□□□□ -1.66
VPS13B-210ENST00000521932 C1orf195Q5TG92 126 aa4.67□□□□□ -1.66
VPS13B-210ENST00000521932 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.67□□□□□ -1.66
VPS13B-210ENST00000521932 A0A087WSZ3 146 aa4.66□□□□□ -1.66
VPS13B-210ENST00000521932 A0A1B0GW54 56 aa4.66□□□□□ -1.66
VPS13B-210ENST00000521932 F8W1H4 67 aa4.66□□□□□ -1.66
VPS13B-210ENST00000521932 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
VPS13B-210ENST00000521932 Q6ZQT0 140 aa4.66□□□□□ -1.66
VPS13B-210ENST00000521932 SS18L2Q9UHA2 77 aa4.66□□□□□ -1.66
VPS13B-210ENST00000521932 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
VPS13B-210ENST00000521932 C14orf132Q9NPU4 83 aa4.65□□□□□ -1.67
VPS13B-210ENST00000521932 Q96NJ1 140 aa4.63□□□□□ -1.67
VPS13B-210ENST00000521932 VPS25Q9BRG1 176 aa4.63□□□□□ -1.67
VPS13B-210ENST00000521932 LRP2P98164 4655 aa4.63□□□□□ -1.67
VPS13B-210ENST00000521932 KRTAP13-3Q3SY46 172 aa4.62□□□□□ -1.67
VPS13B-210ENST00000521932 LINC00472Q9H8W2 130 aa4.61□□□□□ -1.67
VPS13B-210ENST00000521932 A0A1B0GV90 55 aa4.6□□□□□ -1.67
VPS13B-210ENST00000521932 ETDBQ3ZM63 59 aa4.58□□□□□ -1.68
VPS13B-210ENST00000521932 UBR4Q5T4S7 5183 aa4.57□□□□□ -1.68
VPS13B-210ENST00000521932 C9orf92A6NGG3 77 aa4.55□□□□□ -1.68
VPS13B-210ENST00000521932 J3KT08 172 aa4.55□□□□□ -1.68
VPS13B-210ENST00000521932 IGKV4-1P06312 121 aa4.55□□□□□ -1.68
VPS13B-210ENST00000521932 NREPQ16612 68 aa4.55□□□□□ -1.68
VPS13B-210ENST00000521932 DEFB116Q30KQ4 102 aa4.55□□□□□ -1.68
VPS13B-210ENST00000521932 PRAC1Q96KF2 57 aa4.53□□□□□ -1.68
VPS13B-210ENST00000521932 SIGMAR1Q99720 223 aa4.52□□□□□ -1.69
VPS13B-210ENST00000521932 LINC00846Q9NV44 126 aa4.52□□□□□ -1.69
VPS13B-210ENST00000521932 Q6ZVQ6 151 aa4.51□□□□□ -1.69
VPS13B-210ENST00000521932 A0A1B0GVX0 72 aa4.5□□□□□ -1.69
VPS13B-210ENST00000521932 A8MWP4 228 aa4.5□□□□□ -1.69
VPS13B-210ENST00000521932 LINC00313P59037 77 aa4.5□□□□□ -1.69
VPS13B-210ENST00000521932 UBL5Q9BZL1 73 aa4.5□□□□□ -1.69
VPS13B-210ENST00000521932 NDUFB1O75438 58 aa4.49□□□□□ -1.69
VPS13B-210ENST00000521932 ACYP1P07311 99 aa4.49□□□□□ -1.69
VPS13B-210ENST00000521932 DSCR10P59022 87 aa4.49□□□□□ -1.69
VPS13B-210ENST00000521932 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
VPS13B-210ENST00000521932 MUC17Q685J3 4493 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 IGHV6-1A0A0B4J1U7 121 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 IGKV3D-7A0A0C4DH55 119 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 C8orf87E5RJ46 101 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 BPY2O14599 106 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
VPS13B-210ENST00000521932 PRR15Q8IV56 129 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 MUC2Q02817 5179 aa4.48□□□□□ -1.69
VPS13B-210ENST00000521932 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
VPS13B-210ENST00000521932 C20orf166-AS1Q96NR2 134 aa4.47□□□□□ -1.69
VPS13B-210ENST00000521932 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
VPS13B-210ENST00000521932 A8MUU9 505 aa4.46□□□□□ -1.7
VPS13B-210ENST00000521932 K7EQZ3 153 aa4.45□□□□□ -1.7
VPS13B-210ENST00000521932 C8orf17Q9NRJ1 99 aa4.45□□□□□ -1.7
VPS13B-210ENST00000521932 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
VPS13B-210ENST00000521932 CXCL6P80162 114 aa4.43□□□□□ -1.7
VPS13B-210ENST00000521932 PCOTHQ58A44 107 aa4.43□□□□□ -1.7
VPS13B-210ENST00000521932 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
VPS13B-210ENST00000521932 ATP11AUNQ6ZP68 121 aa4.42□□□□□ -1.7
VPS13B-210ENST00000521932 J3QR89 54 aa4.41□□□□□ -1.7
VPS13B-210ENST00000521932 Q8N9L7 120 aa4.41□□□□□ -1.7
VPS13B-210ENST00000521932 KRTAP4-1Q9BYQ7 146 aa4.41□□□□□ -1.7
VPS13B-210ENST00000521932 MT3P25713 68 aa4.4□□□□□ -1.71
VPS13B-210ENST00000521932 hDV103S1A0JD37 113 aa4.39□□□□□ -1.71
VPS13B-210ENST00000521932 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
VPS13B-210ENST00000521932 TMEM254Q8TBM7 123 aa4.39□□□□□ -1.71
VPS13B-210ENST00000521932 MRPL34Q9BQ48 92 aaKnown RBP4.39□□□□□ -1.71
VPS13B-210ENST00000521932 LINC00643Q86TS7 51 aa4.38□□□□□ -1.71
VPS13B-210ENST00000521932 HCG22E2RYF7 251 aa4.36□□□□□ -1.71
VPS13B-210ENST00000521932 CASC2Q6XLA1 102 aa4.36□□□□□ -1.71
VPS13B-210ENST00000521932 K7ERU9 68 aa4.34□□□□□ -1.71
VPS13B-210ENST00000521932 WFDC13Q8IUB5 93 aa4.34□□□□□ -1.71
VPS13B-210ENST00000521932 ZCCHC13Q8WW36 166 aaKnown RBP4.34□□□□□ -1.71
VPS13B-210ENST00000521932 A0A0U1RQV1 116 aa4.31□□□□□ -1.72
VPS13B-210ENST00000521932 NDUFS5O43920 106 aa4.31□□□□□ -1.72
VPS13B-210ENST00000521932 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
VPS13B-210ENST00000521932 FAT4Q6V0I7 4981 aa4.31□□□□□ -1.72
VPS13B-210ENST00000521932 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
VPS13B-210ENST00000521932 Q5W150 140 aa4.29□□□□□ -1.72
VPS13B-210ENST00000521932 TP53AIP1Q9HCN2 124 aa4.29□□□□□ -1.72
VPS13B-210ENST00000521932 A0A087WVE0 104 aa4.27□□□□□ -1.73
VPS13B-210ENST00000521932 SPINK7P58062 85 aa4.27□□□□□ -1.73
VPS13B-210ENST00000521932 OCR1Q9BZK8 76 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms