RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 C14orf132Q9NPU4 83 aa10.78□□□□□ -0.68
TRIM35-203ENST00000521253 PDE6GP18545 87 aa10.76□□□□□ -0.69
TRIM35-203ENST00000521253 MT1HP80294 61 aa10.76□□□□□ -0.69
TRIM35-203ENST00000521253 A0A1B0GVX0 72 aa10.73□□□□□ -0.69
TRIM35-203ENST00000521253 A0A1B0GW54 56 aa10.73□□□□□ -0.69
TRIM35-203ENST00000521253 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
TRIM35-203ENST00000521253 J3KT08 172 aa10.72□□□□□ -0.69
TRIM35-203ENST00000521253 MTURNQ8N3F0 131 aa10.72□□□□□ -0.69
TRIM35-203ENST00000521253 H3BT86 120 aa10.71□□□□□ -0.69
TRIM35-203ENST00000521253 COX6B2Q6YFQ2 88 aa10.71□□□□□ -0.69
TRIM35-203ENST00000521253 C8orf87E5RJ46 101 aa10.69□□□□□ -0.7
TRIM35-203ENST00000521253 SPCS1Q9Y6A9 102 aa10.65□□□□□ -0.7
TRIM35-203ENST00000521253 FLGP20930 4061 aaPredicted RBP10.64□□□□□ -0.71
TRIM35-203ENST00000521253 NDUFB1O75438 58 aa10.63□□□□□ -0.71
TRIM35-203ENST00000521253 A8MWP4 228 aa10.61□□□□□ -0.71
TRIM35-203ENST00000521253 NREPQ16612 68 aa10.6□□□□□ -0.71
TRIM35-203ENST00000521253 IGKV3D-7A0A0C4DH55 119 aa10.58□□□□□ -0.72
TRIM35-203ENST00000521253 M0R2T5 61 aa10.56□□□□□ -0.72
TRIM35-203ENST00000521253 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
TRIM35-203ENST00000521253 C8orf17Q9NRJ1 99 aa10.55□□□□□ -0.72
TRIM35-203ENST00000521253 KRTAP10-6P60371 365 aaPredicted RBP10.52□□□□□ -0.73
TRIM35-203ENST00000521253 PRR15Q8IV56 129 aa10.52□□□□□ -0.73
TRIM35-203ENST00000521253 Q8N9P0 234 aaPredicted RBP10.52□□□□□ -0.73
TRIM35-203ENST00000521253 LORP23490 312 aaPredicted RBP10.51□□□□□ -0.73
TRIM35-203ENST00000521253 KRTAP9-6A0A140TA67 174 aa10.5□□□□□ -0.73
TRIM35-203ENST00000521253 K7EP34 96 aa10.5□□□□□ -0.73
TRIM35-203ENST00000521253 ZCCHC13Q8WW36 166 aaKnown RBP10.5□□□□□ -0.73
TRIM35-203ENST00000521253 PRO0461Q9UI25 63 aa10.5□□□□□ -0.73
TRIM35-203ENST00000521253 Q6ZVQ6 151 aa10.47□□□□□ -0.73
TRIM35-203ENST00000521253 HRES1P13985 223 aa10.46□□□□□ -0.73
TRIM35-203ENST00000521253 LCE2DQ5TA82 110 aaPredicted RBP10.45□□□□□ -0.74
TRIM35-203ENST00000521253 MMP24-AS1A0A0U1RRL7 71 aa10.44□□□□□ -0.74
TRIM35-203ENST00000521253 K7EQZ3 153 aa10.44□□□□□ -0.74
TRIM35-203ENST00000521253 BPY2O14599 106 aa10.43□□□□□ -0.74
TRIM35-203ENST00000521253 MPLKIPQ8TAP9 179 aa10.43□□□□□ -0.74
TRIM35-203ENST00000521253 GTF2H5Q6ZYL4 71 aa10.41□□□□□ -0.74
TRIM35-203ENST00000521253 TMEM254Q8TBM7 123 aa10.4□□□□□ -0.74
TRIM35-203ENST00000521253 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
TRIM35-203ENST00000521253 A0A1B0GV90 55 aa10.39□□□□□ -0.75
TRIM35-203ENST00000521253 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
TRIM35-203ENST00000521253 MRPL34Q9BQ48 92 aaKnown RBP10.39□□□□□ -0.75
TRIM35-203ENST00000521253 RBM12B-AS1Q9P1G2 102 aa10.39□□□□□ -0.75
TRIM35-203ENST00000521253 SPINK7P58062 85 aa10.38□□□□□ -0.75
TRIM35-203ENST00000521253 hDV103S1A0JD37 113 aa10.36□□□□□ -0.75
TRIM35-203ENST00000521253 FSIP2Q5CZC0 6907 aa10.33□□□□□ -0.76
TRIM35-203ENST00000521253 Q8N9L7 120 aa10.33□□□□□ -0.76
TRIM35-203ENST00000521253 LINC00846Q9NV44 126 aa10.33□□□□□ -0.76
TRIM35-203ENST00000521253 F8W1H4 67 aa10.3□□□□□ -0.76
TRIM35-203ENST00000521253 NDUFS5O43920 106 aa10.29□□□□□ -0.76
TRIM35-203ENST00000521253 UBL5Q9BZL1 73 aa10.29□□□□□ -0.76
TRIM35-203ENST00000521253 WFDC13Q8IUB5 93 aa10.26□□□□□ -0.77
TRIM35-203ENST00000521253 ETDBQ3ZM63 59 aa10.25□□□□□ -0.77
TRIM35-203ENST00000521253 CASC2Q6XLA1 102 aa10.24□□□□□ -0.77
TRIM35-203ENST00000521253 KRTAP9-8Q9BYQ0 159 aa10.2□□□□□ -0.78
TRIM35-203ENST00000521253 CRCT1Q9UGL9 99 aa10.2□□□□□ -0.78
TRIM35-203ENST00000521253 Q5W150 140 aa10.18□□□□□ -0.78
TRIM35-203ENST00000521253 HCG22E2RYF7 251 aa10.17□□□□□ -0.78
TRIM35-203ENST00000521253 IGKV2D-30A0A075B6S6 120 aa10.11□□□□□ -0.79
TRIM35-203ENST00000521253 IGKV2-30P06310 120 aa10.11□□□□□ -0.79
TRIM35-203ENST00000521253 CXCL6P80162 114 aa10.09□□□□□ -0.79
TRIM35-203ENST00000521253 MT2AP02795 61 aa10.08□□□□□ -0.8
TRIM35-203ENST00000521253 C7orf65Q6ZTY9 151 aa10.08□□□□□ -0.8
TRIM35-203ENST00000521253 MT1FP04733 61 aa10.01□□□□□ -0.81
TRIM35-203ENST00000521253 ACYP1P07311 99 aa9.99□□□□□ -0.81
TRIM35-203ENST00000521253 H1FX-AS1Q4G0G2 97 aa9.98□□□□□ -0.81
TRIM35-203ENST00000521253 FAM240AA0A1B0GVK7 77 aa9.96□□□□□ -0.82
TRIM35-203ENST00000521253 KRTAP10-10P60014 251 aa9.95□□□□□ -0.82
TRIM35-203ENST00000521253 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
TRIM35-203ENST00000521253 C4orf26Q17RF5 130 aa9.93□□□□□ -0.82
TRIM35-203ENST00000521253 USH2AO75445 5202 aa9.92□□□□□ -0.82
TRIM35-203ENST00000521253 J3QR89 54 aa9.9□□□□□ -0.82
TRIM35-203ENST00000521253 ATP5EP2Q5VTU8 51 aa9.88□□□□□ -0.83
TRIM35-203ENST00000521253 KRTAP9-3Q9BYQ3 159 aa9.88□□□□□ -0.83
TRIM35-203ENST00000521253 K7ERU9 68 aa9.83□□□□□ -0.84
TRIM35-203ENST00000521253 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
TRIM35-203ENST00000521253 LCE2BO14633 110 aa9.8□□□□□ -0.84
TRIM35-203ENST00000521253 SSPOA2VEC9 5147 aa9.79□□□□□ -0.84
TRIM35-203ENST00000521253 KRTAP3-1Q9BYR8 98 aa9.79□□□□□ -0.84
TRIM35-203ENST00000521253 LINC00643Q86TS7 51 aa9.77□□□□□ -0.85
TRIM35-203ENST00000521253 TRAV22A0A0B4J277 110 aa9.75□□□□□ -0.85
TRIM35-203ENST00000521253 C1orf64Q8NEQ6 169 aa9.75□□□□□ -0.85
TRIM35-203ENST00000521253 CYP4F30PQ9H0H9 118 aa9.73□□□□□ -0.85
TRIM35-203ENST00000521253 A0A087WVE0 104 aa9.72□□□□□ -0.85
TRIM35-203ENST00000521253 LOC101927531A0A1B0GV80 90 aa9.68□□□□□ -0.86
TRIM35-203ENST00000521253 UQCRQO14949 82 aa9.68□□□□□ -0.86
TRIM35-203ENST00000521253 S4R3F8 94 aa9.68□□□□□ -0.86
TRIM35-203ENST00000521253 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
TRIM35-203ENST00000521253 H0Y9P7 68 aa9.63□□□□□ -0.87
TRIM35-203ENST00000521253 LCA10Q71F78 164 aa9.62□□□□□ -0.87
TRIM35-203ENST00000521253 ATOX1O00244 68 aa9.6□□□□□ -0.87
TRIM35-203ENST00000521253 CSAG1Q6PB30 78 aa9.58□□□□□ -0.88
TRIM35-203ENST00000521253 KRTAP19-1Q8IUB9 90 aa9.57□□□□□ -0.88
TRIM35-203ENST00000521253 OCR1Q9BZK8 76 aa9.53□□□□□ -0.88
TRIM35-203ENST00000521253 FCGBPQ9Y6R7 5405 aaPredicted RBP9.52□□□□□ -0.88
TRIM35-203ENST00000521253 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.52□□□□□ -0.89
TRIM35-203ENST00000521253 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
TRIM35-203ENST00000521253 FAM236AA0A1B0GUQ0 79 aa9.49□□□□□ -0.89
TRIM35-203ENST00000521253 FAM236BA0A1B0GV22 79 aa9.49□□□□□ -0.89
TRIM35-203ENST00000521253 LINC00208Q96KT6 92 aa9.48□□□□□ -0.89
TRIM35-203ENST00000521253 IMUPQ9GZP8 106 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms