RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 MAP1AP78559 2803 aaPredicted RBP1.28□□□□□ -2.2
SKP1-208ENST00000521216 DSPP15924 2871 aaKnown RBP1.28□□□□□ -2.2
SKP1-208ENST00000521216 FRYQ5TBA9 3013 aa1.28□□□□□ -2.2
SKP1-208ENST00000521216 SPEGQ15772 3267 aa1.27□□□□□ -2.21
SKP1-208ENST00000521216 PKDREJQ9NTG1 2253 aa1.27□□□□□ -2.21
SKP1-208ENST00000521216 AKAP9Q99996 3911 aa1.27□□□□□ -2.21
SKP1-208ENST00000521216 RPS29P62273 56 aaKnown RBP1.27□□□□□ -2.21
SKP1-208ENST00000521216 C5orf42Q9H799 3197 aa1.27□□□□□ -2.21
SKP1-208ENST00000521216 TRANK1O15050 2925 aa1.27□□□□□ -2.21
SKP1-208ENST00000521216 UBR5O95071 2799 aaPredicted RBP1.27□□□□□ -2.21
SKP1-208ENST00000521216 SPTA1P02549 2419 aa1.26□□□□□ -2.21
SKP1-208ENST00000521216 PTPRZ1P23471 2315 aaPredicted RBP1.26□□□□□ -2.21
SKP1-208ENST00000521216 EP400Q96L91 3159 aa1.26□□□□□ -2.21
SKP1-208ENST00000521216 DNAH12Q6ZR08 3092 aa1.26□□□□□ -2.21
SKP1-208ENST00000521216 COL12A1Q99715 3063 aa1.26□□□□□ -2.21
SKP1-208ENST00000521216 CRYBG3Q68DQ2 2970 aa1.26□□□□□ -2.21
SKP1-208ENST00000521216 LAMA2P24043 3122 aaKnown RBP1.26□□□□□ -2.21
SKP1-208ENST00000521216 NBPF19A0A087WUL8 3843 aa1.25□□□□□ -2.21
SKP1-208ENST00000521216 HTN3P15516 51 aa1.25□□□□□ -2.21
SKP1-208ENST00000521216 VPS13DQ5THJ4 4388 aa1.25□□□□□ -2.21
SKP1-208ENST00000521216 MAP1BP46821 2468 aaKnown RBP1.25□□□□□ -2.21
SKP1-208ENST00000521216 CHD9Q3L8U1 2897 aa1.24□□□□□ -2.21
SKP1-208ENST00000521216 PRRC2CQ9Y520 2896 aaKnown RBP1.24□□□□□ -2.21
SKP1-208ENST00000521216 DMDP11532 3685 aa1.24□□□□□ -2.21
SKP1-208ENST00000521216 ZNF462Q96JM2 2506 aa1.24□□□□□ -2.21
SKP1-208ENST00000521216 HTTP42858 3142 aa1.24□□□□□ -2.21
SKP1-208ENST00000521216 FREM2Q5SZK8 3169 aa1.23□□□□□ -2.21
SKP1-208ENST00000521216 ROS1P08922 2347 aa1.23□□□□□ -2.21
SKP1-208ENST00000521216 ATMQ13315 3056 aa1.23□□□□□ -2.21
SKP1-208ENST00000521216 CELSR3Q9NYQ7 3312 aa1.23□□□□□ -2.21
SKP1-208ENST00000521216 ZFHX4Q86UP3 3567 aa1.23□□□□□ -2.21
SKP1-208ENST00000521216 LAMA1P25391 3075 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 CSPG4Q6UVK1 2322 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 USP34Q70CQ2 3546 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 DMXL2Q8TDJ6 3036 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 DEFB135Q30KP9 77 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 CEP250Q9BV73 2442 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 MEGF8Q7Z7M0 2845 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 ITPR1Q14643 2758 aa1.22□□□□□ -2.21
SKP1-208ENST00000521216 EP300Q09472 2414 aaPredicted RBP1.21□□□□□ -2.22
SKP1-208ENST00000521216 XIRP2A4UGR9 3374 aa1.21□□□□□ -2.22
SKP1-208ENST00000521216 APC2O95996 2303 aa1.21□□□□□ -2.22
SKP1-208ENST00000521216 CACNA1HO95180 2353 aa1.21□□□□□ -2.22
SKP1-208ENST00000521216 LOC400499M0QZD8 3231 aa1.21□□□□□ -2.22
SKP1-208ENST00000521216 COL6A5A8TX70 2615 aa1.2□□□□□ -2.22
SKP1-208ENST00000521216 SRRM2Q9UQ35 2752 aaKnown RBP1.2□□□□□ -2.22
SKP1-208ENST00000521216 FRAS1Q86XX4 4008 aa1.2□□□□□ -2.22
SKP1-208ENST00000521216 TNP1P09430 55 aa1.2□□□□□ -2.22
SKP1-208ENST00000521216 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
SKP1-208ENST00000521216 C9orf92A6NGG3 77 aa1.19□□□□□ -2.22
SKP1-208ENST00000521216 DEFB4AO15263 64 aa1.19□□□□□ -2.22
SKP1-208ENST00000521216 RELNP78509 3460 aa1.19□□□□□ -2.22
SKP1-208ENST00000521216 NF1P21359 2839 aa1.18□□□□□ -2.22
SKP1-208ENST00000521216 WDFY3Q8IZQ1 3526 aa1.18□□□□□ -2.22
SKP1-208ENST00000521216 SPENQ96T58 3664 aaKnown RBP1.17□□□□□ -2.22
SKP1-208ENST00000521216 DCHS2Q6V1P9 2916 aa1.17□□□□□ -2.22
SKP1-208ENST00000521216 DNAH11Q96DT5 4516 aa1.17□□□□□ -2.22
SKP1-208ENST00000521216 TACC2O95359 2948 aa1.17□□□□□ -2.22
SKP1-208ENST00000521216 JMJD1CQ15652 2540 aa1.17□□□□□ -2.22
SKP1-208ENST00000521216 NCOR2Q9Y618 2525 aa1.17□□□□□ -2.22
SKP1-208ENST00000521216 F8P00451 2351 aa1.16□□□□□ -2.22
SKP1-208ENST00000521216 DNAH14Q0VDD8 3507 aa1.16□□□□□ -2.22
SKP1-208ENST00000521216 FAM186AA6NE01 2351 aa1.16□□□□□ -2.22
SKP1-208ENST00000521216 NIPBLQ6KC79 2804 aaeCLIP1.16□□□□□ -2.22
SKP1-208ENST00000521216 LAMA5O15230 3695 aa1.15□□□□□ -2.23
SKP1-208ENST00000521216 ABCA2Q9BZC7 2435 aa1.15□□□□□ -2.23
SKP1-208ENST00000521216 CSMD1Q96PZ7 3565 aa1.15□□□□□ -2.23
SKP1-208ENST00000521216 COL7A1Q02388 2944 aa1.15□□□□□ -2.23
SKP1-208ENST00000521216 NCOR1O75376 2440 aa1.15□□□□□ -2.23
SKP1-208ENST00000521216 VCANP13611 3396 aa1.14□□□□□ -2.23
SKP1-208ENST00000521216 LAMA3Q16787 3333 aa1.14□□□□□ -2.23
SKP1-208ENST00000521216 CCDC168Q8NDH2 2452 aa1.14□□□□□ -2.23
SKP1-208ENST00000521216 C2CD3Q4AC94 2353 aa1.14□□□□□ -2.23
SKP1-208ENST00000521216 ANKHD1Q8IWZ3 2542 aaKnown RBP1.14□□□□□ -2.23
SKP1-208ENST00000521216 GVINP1Q7Z2Y8 2422 aa1.14□□□□□ -2.23
SKP1-208ENST00000521216 ITPR3Q14573 2671 aa1.13□□□□□ -2.23
SKP1-208ENST00000521216 BSNQ9UPA5 3926 aa1.13□□□□□ -2.23
SKP1-208ENST00000521216 NBASA2RRP1 2371 aa1.13□□□□□ -2.23
SKP1-208ENST00000521216 DNAH8Q96JB1 4490 aa1.13□□□□□ -2.23
SKP1-208ENST00000521216 SMR3AQ99954 134 aa1.13□□□□□ -2.23
SKP1-208ENST00000521216 DNAH1Q9P2D7 4330 aa1.13□□□□□ -2.23
SKP1-208ENST00000521216 BRCA2P51587 3418 aa1.12□□□□□ -2.23
SKP1-208ENST00000521216 TENM4Q6N022 2769 aa1.12□□□□□ -2.23
SKP1-208ENST00000521216 MUC3AQ02505 3323 aa1.11□□□□□ -2.23
SKP1-208ENST00000521216 SMG1Q96Q15 3661 aaKnown RBP1.11□□□□□ -2.23
SKP1-208ENST00000521216 APCP25054 2843 aa1.11□□□□□ -2.23
SKP1-208ENST00000521216 PRKDCP78527 4128 aaKnown RBP1.1□□□□□ -2.23
SKP1-208ENST00000521216 TRRAPQ9Y4A5 3859 aa1.1□□□□□ -2.23
SKP1-208ENST00000521216 PDZD2O15018 2839 aa1.1□□□□□ -2.23
SKP1-208ENST00000521216 HIVEP3Q5T1R4 2406 aa1.1□□□□□ -2.23
SKP1-208ENST00000521216 SPG11Q96JI7 2443 aa1.1□□□□□ -2.23
SKP1-208ENST00000521216 NAV2Q8IVL1 2488 aa1.1□□□□□ -2.23
SKP1-208ENST00000521216 LYSTQ99698 3801 aa1.1□□□□□ -2.23
SKP1-208ENST00000521216 SACSQ9NZJ4 4579 aa1.1□□□□□ -2.23
SKP1-208ENST00000521216 UTP20O75691 2785 aaKnown RBP1.09□□□□□ -2.23
SKP1-208ENST00000521216 PTPN13Q12923 2485 aa1.09□□□□□ -2.23
SKP1-208ENST00000521216 CSMD3Q7Z407 3707 aa1.09□□□□□ -2.23
SKP1-208ENST00000521216 TEX15Q9BXT5 2789 aa1.09□□□□□ -2.24
SKP1-208ENST00000521216 ANK2Q01484 3957 aa1.08□□□□□ -2.24
SKP1-208ENST00000521216 ADGRG4Q8IZF6 3080 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms