RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 PSMB2P49721 201 aa9.9□□□□□ -0.82
PABPC1-217ENST00000521067 A0A1B0GVX0 72 aa9.88□□□□□ -0.83
PABPC1-217ENST00000521067 UBE2V1Q13404 147 aa9.87□□□□□ -0.83
PABPC1-217ENST00000521067 C8orf87E5RJ46 101 aa9.86□□□□□ -0.83
PABPC1-217ENST00000521067 ZCCHC13Q8WW36 166 aaKnown RBP9.85□□□□□ -0.83
PABPC1-217ENST00000521067 SYNE2Q8WXH0 6885 aaKnown RBP9.85□□□□□ -0.83
PABPC1-217ENST00000521067 SPINK7P58062 85 aa9.84□□□□□ -0.83
PABPC1-217ENST00000521067 HSD52Q0P140 79 aa9.84□□□□□ -0.83
PABPC1-217ENST00000521067 VPS25Q9BRG1 176 aa9.84□□□□□ -0.83
PABPC1-217ENST00000521067 COX6CP09669 75 aa9.82□□□□□ -0.84
PABPC1-217ENST00000521067 RBM3P98179 157 aaKnown RBP9.8□□□□□ -0.84
PABPC1-217ENST00000521067 MTURNQ8N3F0 131 aa9.8□□□□□ -0.84
PABPC1-217ENST00000521067 KRTAP19-6Q3LI70 58 aa9.77□□□□□ -0.85
PABPC1-217ENST00000521067 PYY3Q5JQD4 70 aa9.77□□□□□ -0.85
PABPC1-217ENST00000521067 Q8N9P0 234 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-217ENST00000521067 DSCR8Q96T75 97 aa9.76□□□□□ -0.85
PABPC1-217ENST00000521067 J3KT08 172 aa9.73□□□□□ -0.85
PABPC1-217ENST00000521067 Q6ZQT0 140 aa9.73□□□□□ -0.85
PABPC1-217ENST00000521067 SCGB1C2P0DMR2 95 aa9.71□□□□□ -0.86
PABPC1-217ENST00000521067 C9JAW5 83 aa9.7□□□□□ -0.86
PABPC1-217ENST00000521067 BAALC-AS2P0C853 105 aa9.7□□□□□ -0.86
PABPC1-217ENST00000521067 WFDC13Q8IUB5 93 aa9.69□□□□□ -0.86
PABPC1-217ENST00000521067 A8MWP4 228 aa9.67□□□□□ -0.86
PABPC1-217ENST00000521067 C8orf17Q9NRJ1 99 aa9.67□□□□□ -0.86
PABPC1-217ENST00000521067 NDUFB1O75438 58 aa9.65□□□□□ -0.86
PABPC1-217ENST00000521067 IGKV3D-7A0A0C4DH55 119 aa9.64□□□□□ -0.87
PABPC1-217ENST00000521067 C21orf62-AS1Q17RA5 79 aa9.64□□□□□ -0.87
PABPC1-217ENST00000521067 LINC00846Q9NV44 126 aa9.64□□□□□ -0.87
PABPC1-217ENST00000521067 UQCR10Q9UDW1 63 aa9.64□□□□□ -0.87
PABPC1-217ENST00000521067 LYRM7Q5U5X0 104 aa9.62□□□□□ -0.87
PABPC1-217ENST00000521067 Q6ZVQ6 151 aa9.59□□□□□ -0.87
PABPC1-217ENST00000521067 LOC110117498A0A087WWA1 95 aa9.55□□□□□ -0.88
PABPC1-217ENST00000521067 PRR15Q8IV56 129 aa9.54□□□□□ -0.88
PABPC1-217ENST00000521067 A0A1B0GW54 56 aa9.53□□□□□ -0.88
PABPC1-217ENST00000521067 NAA38Q9BRA0 125 aaKnown RBP9.53□□□□□ -0.88
PABPC1-217ENST00000521067 JMJD7-PLA2G4BH0Y9G9 81 aa9.52□□□□□ -0.89
PABPC1-217ENST00000521067 H1FX-AS1Q4G0G2 97 aa9.51□□□□□ -0.89
PABPC1-217ENST00000521067 MMP24-AS1A0A0U1RRL7 71 aa9.49□□□□□ -0.89
PABPC1-217ENST00000521067 ATXN8Q156A1 80 aa9.49□□□□□ -0.89
PABPC1-217ENST00000521067 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
PABPC1-217ENST00000521067 KRTAP6-3Q3LI67 103 aa9.48□□□□□ -0.89
PABPC1-217ENST00000521067 MRPL34Q9BQ48 92 aaKnown RBP9.48□□□□□ -0.89
PABPC1-217ENST00000521067 PDE6GP18545 87 aa9.46□□□□□ -0.9
PABPC1-217ENST00000521067 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
PABPC1-217ENST00000521067 NREPQ16612 68 aa9.45□□□□□ -0.9
PABPC1-217ENST00000521067 K7EQZ3 153 aa9.4□□□□□ -0.9
PABPC1-217ENST00000521067 TMA7Q9Y2S6 64 aaKnown RBP9.4□□□□□ -0.9
PABPC1-217ENST00000521067 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
PABPC1-217ENST00000521067 Q5W150 140 aa9.39□□□□□ -0.91
PABPC1-217ENST00000521067 NDUFS5O43920 106 aa9.37□□□□□ -0.91
PABPC1-217ENST00000521067 IGKV2D-30A0A075B6S6 120 aa9.36□□□□□ -0.91
PABPC1-217ENST00000521067 IGKV2-30P06310 120 aa9.36□□□□□ -0.91
PABPC1-217ENST00000521067 M0R143 59 aa9.33□□□□□ -0.92
PABPC1-217ENST00000521067 C7orf65Q6ZTY9 151 aa9.3□□□□□ -0.92
PABPC1-217ENST00000521067 NEBP20929 6669 aa9.28□□□□□ -0.92
PABPC1-217ENST00000521067 MUC12Q9UKN1 5478 aa9.27□□□□□ -0.93
PABPC1-217ENST00000521067 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
PABPC1-217ENST00000521067 BPY2O14599 106 aa9.24□□□□□ -0.93
PABPC1-217ENST00000521067 Q8N9L7 120 aa9.23□□□□□ -0.93
PABPC1-217ENST00000521067 MT1BP07438 61 aa9.21□□□□□ -0.94
PABPC1-217ENST00000521067 C5orf47Q569G3 176 aa9.2□□□□□ -0.94
PABPC1-217ENST00000521067 HCG22E2RYF7 251 aa9.19□□□□□ -0.94
PABPC1-217ENST00000521067 KRTAP3-1Q9BYR8 98 aa9.19□□□□□ -0.94
PABPC1-217ENST00000521067 CASC2Q6XLA1 102 aa9.18□□□□□ -0.94
PABPC1-217ENST00000521067 A6NN06 94 aa9.16□□□□□ -0.94
PABPC1-217ENST00000521067 H3BT86 120 aa9.16□□□□□ -0.94
PABPC1-217ENST00000521067 BATFQ16520 125 aa9.14□□□□□ -0.95
PABPC1-217ENST00000521067 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
PABPC1-217ENST00000521067 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
PABPC1-217ENST00000521067 KRTAP19-8Q3LI54 63 aa9.12□□□□□ -0.95
PABPC1-217ENST00000521067 C9orf118A6NHY6 69 aa9.1□□□□□ -0.95
PABPC1-217ENST00000521067 CXCL6P80162 114 aa9.1□□□□□ -0.95
PABPC1-217ENST00000521067 SPRR2GQ9BYE4 73 aa9.1□□□□□ -0.95
PABPC1-217ENST00000521067 Q5VV11 94 aa9.09□□□□□ -0.95
PABPC1-217ENST00000521067 A0A1W2PPM0 123 aa9.07□□□□□ -0.96
PABPC1-217ENST00000521067 TAX1BP3O14907 124 aa9.07□□□□□ -0.96
PABPC1-217ENST00000521067 TSTD3H0UI37 97 aa9.06□□□□□ -0.96
PABPC1-217ENST00000521067 S4R3F8 94 aa9.06□□□□□ -0.96
PABPC1-217ENST00000521067 LCA10Q71F78 164 aa9.05□□□□□ -0.96
PABPC1-217ENST00000521067 SMIM6P0DI80 62 aa9.04□□□□□ -0.96
PABPC1-217ENST00000521067 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
PABPC1-217ENST00000521067 KRTAP10-5P60370 271 aa9.03□□□□□ -0.96
PABPC1-217ENST00000521067 C1orf64Q8NEQ6 169 aa9.02□□□□□ -0.97
PABPC1-217ENST00000521067 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
PABPC1-217ENST00000521067 KMT2DO14686 5537 aa8.99□□□□□ -0.97
PABPC1-217ENST00000521067 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
PABPC1-217ENST00000521067 KRTAP3-3Q9BYR6 98 aa8.95□□□□□ -0.98
PABPC1-217ENST00000521067 KLKP1Q107X0 134 aa8.94□□□□□ -0.98
PABPC1-217ENST00000521067 KRTAP5-9P26371 169 aa8.93□□□□□ -0.98
PABPC1-217ENST00000521067 KRTAP20-1Q3LI63 56 aa8.91□□□□□ -0.98
PABPC1-217ENST00000521067 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
PABPC1-217ENST00000521067 SPCS1Q9Y6A9 102 aa8.9□□□□□ -0.98
PABPC1-217ENST00000521067 A0A087WVE0 104 aa8.85□□□□□ -0.99
PABPC1-217ENST00000521067 PRO0461Q9UI25 63 aa8.84□□□□□ -0.99
PABPC1-217ENST00000521067 TP53AIP1Q9HCN2 124 aa8.83□□□□□ -1
PABPC1-217ENST00000521067 CYP4F30PQ9H0H9 118 aa8.78□□□□□ -1
PABPC1-217ENST00000521067 CRIPTQ9P021 101 aa8.75□□□□□ -1.01
PABPC1-217ENST00000521067 IMUPQ9GZP8 106 aa8.73□□□□□ -1.01
PABPC1-217ENST00000521067 LOC105371267A0A1B0GV96 52 aa8.72□□□□□ -1.01
PABPC1-217ENST00000521067 K7EP34 96 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms