RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 Q6ZVQ6 151 aa9.44□□□□□ -0.9
TRAM1-203ENST00000520700 A8MWP4 228 aa9.43□□□□□ -0.9
TRAM1-203ENST00000520700 NDUFB1O75438 58 aa9.43□□□□□ -0.9
TRAM1-203ENST00000520700 LINC00313P59037 77 aa9.43□□□□□ -0.9
TRAM1-203ENST00000520700 C8orf87E5RJ46 101 aa9.42□□□□□ -0.9
TRAM1-203ENST00000520700 UBL5Q9BZL1 73 aa9.42□□□□□ -0.9
TRAM1-203ENST00000520700 SEC61BP60468 96 aaKnown RBP9.41□□□□□ -0.9
TRAM1-203ENST00000520700 ACYP1P07311 99 aa9.4□□□□□ -0.9
TRAM1-203ENST00000520700 IGHV6-1A0A0B4J1U7 121 aa9.39□□□□□ -0.91
TRAM1-203ENST00000520700 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
TRAM1-203ENST00000520700 BPY2O14599 106 aa9.39□□□□□ -0.91
TRAM1-203ENST00000520700 DSCR10P59022 87 aa9.39□□□□□ -0.91
TRAM1-203ENST00000520700 RPL37P61927 97 aaKnown RBP9.39□□□□□ -0.91
TRAM1-203ENST00000520700 IGKV3D-7A0A0C4DH55 119 aa9.38□□□□□ -0.91
TRAM1-203ENST00000520700 Q75L30 129 aa9.38□□□□□ -0.91
TRAM1-203ENST00000520700 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
TRAM1-203ENST00000520700 PRR15Q8IV56 129 aa9.38□□□□□ -0.91
TRAM1-203ENST00000520700 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
TRAM1-203ENST00000520700 C20orf166-AS1Q96NR2 134 aa9.37□□□□□ -0.91
TRAM1-203ENST00000520700 A8MUU9 505 aa9.35□□□□□ -0.91
TRAM1-203ENST00000520700 C8orf17Q9NRJ1 99 aa9.32□□□□□ -0.92
TRAM1-203ENST00000520700 K7EQZ3 153 aa9.3□□□□□ -0.92
TRAM1-203ENST00000520700 CXCL6P80162 114 aa9.28□□□□□ -0.92
TRAM1-203ENST00000520700 PCOTHQ58A44 107 aa9.28□□□□□ -0.92
TRAM1-203ENST00000520700 MMP24-AS1A0A0U1RRL7 71 aa9.26□□□□□ -0.93
TRAM1-203ENST00000520700 J3QR89 54 aa9.26□□□□□ -0.93
TRAM1-203ENST00000520700 ATP11AUNQ6ZP68 121 aa9.26□□□□□ -0.93
TRAM1-203ENST00000520700 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
TRAM1-203ENST00000520700 MUC2Q02817 5179 aa9.25□□□□□ -0.93
TRAM1-203ENST00000520700 TMEM254Q8TBM7 123 aa9.23□□□□□ -0.93
TRAM1-203ENST00000520700 ATP5EP2Q5VTU8 51 aa9.21□□□□□ -0.94
TRAM1-203ENST00000520700 Q8N9L7 120 aa9.21□□□□□ -0.94
TRAM1-203ENST00000520700 KRTAP4-1Q9BYQ7 146 aa9.21□□□□□ -0.94
TRAM1-203ENST00000520700 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
TRAM1-203ENST00000520700 MRPL34Q9BQ48 92 aaKnown RBP9.2□□□□□ -0.94
TRAM1-203ENST00000520700 LINC00643Q86TS7 51 aa9.18□□□□□ -0.94
TRAM1-203ENST00000520700 CASC2Q6XLA1 102 aa9.15□□□□□ -0.94
TRAM1-203ENST00000520700 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
TRAM1-203ENST00000520700 ZCCHC13Q8WW36 166 aaKnown RBP9.12□□□□□ -0.95
TRAM1-203ENST00000520700 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
TRAM1-203ENST00000520700 K7ERU9 68 aa9.1□□□□□ -0.95
TRAM1-203ENST00000520700 A0A0U1RQV1 116 aa9.07□□□□□ -0.96
TRAM1-203ENST00000520700 FAT4Q6V0I7 4981 aa9.07□□□□□ -0.96
TRAM1-203ENST00000520700 NDUFS5O43920 106 aa9.03□□□□□ -0.96
TRAM1-203ENST00000520700 HIST1H4AP62805 103 aaKnown RBP9.02□□□□□ -0.97
TRAM1-203ENST00000520700 TP53AIP1Q9HCN2 124 aa8.99□□□□□ -0.97
TRAM1-203ENST00000520700 KRTAP19-2Q3LHN2 52 aa8.98□□□□□ -0.97
TRAM1-203ENST00000520700 Q5W150 140 aa8.96□□□□□ -0.98
TRAM1-203ENST00000520700 SPINK7P58062 85 aa8.95□□□□□ -0.98
TRAM1-203ENST00000520700 KRTAP3-3Q9BYR6 98 aa8.94□□□□□ -0.98
TRAM1-203ENST00000520700 KRTAP3-2Q9BYR7 98 aa8.94□□□□□ -0.98
TRAM1-203ENST00000520700 A0A087WVE0 104 aa8.93□□□□□ -0.98
TRAM1-203ENST00000520700 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
TRAM1-203ENST00000520700 LCE2CQ5TA81 110 aa8.92□□□□□ -0.98
TRAM1-203ENST00000520700 HRES1P13985 223 aa8.91□□□□□ -0.98
TRAM1-203ENST00000520700 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
TRAM1-203ENST00000520700 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
TRAM1-203ENST00000520700 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
TRAM1-203ENST00000520700 UQCRQO14949 82 aa8.84□□□□□ -0.99
TRAM1-203ENST00000520700 C7orf65Q6ZTY9 151 aa8.84□□□□□ -0.99
TRAM1-203ENST00000520700 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
TRAM1-203ENST00000520700 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
TRAM1-203ENST00000520700 IGKV2D-30A0A075B6S6 120 aa8.8□□□□□ -1
TRAM1-203ENST00000520700 IGKV2-30P06310 120 aa8.8□□□□□ -1
TRAM1-203ENST00000520700 TRAV22A0A0B4J277 110 aa8.79□□□□□ -1
TRAM1-203ENST00000520700 OCR1Q9BZK8 76 aa8.79□□□□□ -1
TRAM1-203ENST00000520700 FLGP20930 4061 aaPredicted RBP8.77□□□□□ -1
TRAM1-203ENST00000520700 MT1HP80294 61 aa8.75□□□□□ -1.01
TRAM1-203ENST00000520700 ATOX1O00244 68 aa8.74□□□□□ -1.01
TRAM1-203ENST00000520700 SCGB1A1P11684 91 aa8.73□□□□□ -1.01
TRAM1-203ENST00000520700 LOC101927531A0A1B0GV80 90 aa8.72□□□□□ -1.01
TRAM1-203ENST00000520700 FAM236DA0A1B0GTK5 79 aa8.71□□□□□ -1.02
TRAM1-203ENST00000520700 FAM236CP0DP71 79 aa8.71□□□□□ -1.02
TRAM1-203ENST00000520700 CYP4F30PQ9H0H9 118 aa8.71□□□□□ -1.02
TRAM1-203ENST00000520700 H0Y9P7 68 aa8.7□□□□□ -1.02
TRAM1-203ENST00000520700 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
TRAM1-203ENST00000520700 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
TRAM1-203ENST00000520700 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
TRAM1-203ENST00000520700 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
TRAM1-203ENST00000520700 MP68P56378 58 aa8.66□□□□□ -1.02
TRAM1-203ENST00000520700 H3BPC8 53 aa8.64□□□□□ -1.03
TRAM1-203ENST00000520700 C1orf64Q8NEQ6 169 aa8.63□□□□□ -1.03
TRAM1-203ENST00000520700 C4orf26Q17RF5 130 aa8.62□□□□□ -1.03
TRAM1-203ENST00000520700 TRAV7A0A075B6U4 112 aa8.61□□□□□ -1.03
TRAM1-203ENST00000520700 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
TRAM1-203ENST00000520700 H1FX-AS1Q4G0G2 97 aa8.6□□□□□ -1.03
TRAM1-203ENST00000520700 M0R2T5 61 aa8.57□□□□□ -1.04
TRAM1-203ENST00000520700 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
TRAM1-203ENST00000520700 KRTAP10-6P60371 365 aaPredicted RBP8.52□□□□□ -1.05
TRAM1-203ENST00000520700 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
TRAM1-203ENST00000520700 KLKP1Q107X0 134 aa8.5□□□□□ -1.05
TRAM1-203ENST00000520700 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
TRAM1-203ENST00000520700 A8MUN3 132 aa8.42□□□□□ -1.06
TRAM1-203ENST00000520700 KRTAP9-8Q9BYQ0 159 aa8.38□□□□□ -1.07
TRAM1-203ENST00000520700 S4R3F8 94 aa8.37□□□□□ -1.07
TRAM1-203ENST00000520700 COX7CP15954 63 aa8.33□□□□□ -1.08
TRAM1-203ENST00000520700 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
TRAM1-203ENST00000520700 LCA10Q71F78 164 aa8.32□□□□□ -1.08
TRAM1-203ENST00000520700 SNURFQ9Y675 71 aa8.31□□□□□ -1.08
TRAM1-203ENST00000520700 DMAC1Q96GE9 116 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 465.2 ms