RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 J3KT08 172 aa5.02□□□□□ -1.61
VAPB-206ENST00000520497 A0A0G2JQZ4 141 aa5□□□□□ -1.61
VAPB-206ENST00000520497 FAM236AA0A1B0GUQ0 79 aa5□□□□□ -1.61
VAPB-206ENST00000520497 FAM236BA0A1B0GV22 79 aa5□□□□□ -1.61
VAPB-206ENST00000520497 ATOX1O00244 68 aa4.99□□□□□ -1.61
VAPB-206ENST00000520497 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
VAPB-206ENST00000520497 DMBT1Q9UGM3 2413 aaPredicted RBP4.98□□□□□ -1.61
VAPB-206ENST00000520497 NDUFB1O75438 58 aa4.98□□□□□ -1.61
VAPB-206ENST00000520497 PCP4P48539 62 aa4.98□□□□□ -1.61
VAPB-206ENST00000520497 KRTAP5-3Q6L8H2 238 aa4.98□□□□□ -1.61
VAPB-206ENST00000520497 HRCT1Q6UXD1 115 aa4.98□□□□□ -1.61
VAPB-206ENST00000520497 PRR26Q8N8Z3 221 aa4.98□□□□□ -1.61
VAPB-206ENST00000520497 TYMSOSQ8TAI1 123 aa4.98□□□□□ -1.61
VAPB-206ENST00000520497 ANAPC13Q9BS18 74 aa4.98□□□□□ -1.61
VAPB-206ENST00000520497 SMIM20Q8N5G0 67 aa4.97□□□□□ -1.61
VAPB-206ENST00000520497 LRP1Q07954 4544 aaKnown RBP4.97□□□□□ -1.61
VAPB-206ENST00000520497 TNXBP22105 4242 aa4.96□□□□□ -1.62
VAPB-206ENST00000520497 A0A087WVE0 104 aa4.95□□□□□ -1.62
VAPB-206ENST00000520497 IGKV4-1P06312 121 aa4.95□□□□□ -1.62
VAPB-206ENST00000520497 SPAG11AQ6PDA7 123 aa4.95□□□□□ -1.62
VAPB-206ENST00000520497 LINC00472Q9H8W2 130 aa4.95□□□□□ -1.62
VAPB-206ENST00000520497 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
VAPB-206ENST00000520497 A8MWP4 228 aa4.94□□□□□ -1.62
VAPB-206ENST00000520497 SPINK1P00995 79 aa4.94□□□□□ -1.62
VAPB-206ENST00000520497 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
VAPB-206ENST00000520497 ASB16-AS1Q495Z4 193 aa4.94□□□□□ -1.62
VAPB-206ENST00000520497 DSCR10P59022 87 aa4.93□□□□□ -1.62
VAPB-206ENST00000520497 Q5XG85 94 aa4.93□□□□□ -1.62
VAPB-206ENST00000520497 K7EQZ3 153 aa4.92□□□□□ -1.62
VAPB-206ENST00000520497 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
VAPB-206ENST00000520497 DEFB116Q30KQ4 102 aa4.92□□□□□ -1.62
VAPB-206ENST00000520497 Q8N9L7 120 aa4.92□□□□□ -1.62
VAPB-206ENST00000520497 LINC00304Q8N9R0 145 aa4.92□□□□□ -1.62
VAPB-206ENST00000520497 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
VAPB-206ENST00000520497 KRTAP29-1A8MX34 341 aaPredicted RBP4.91□□□□□ -1.62
VAPB-206ENST00000520497 HCG22E2RYF7 251 aa4.91□□□□□ -1.62
VAPB-206ENST00000520497 MT1HL1P0DM35 61 aa4.91□□□□□ -1.62
VAPB-206ENST00000520497 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
VAPB-206ENST00000520497 OXTP01178 125 aa4.9□□□□□ -1.63
VAPB-206ENST00000520497 SERP2Q8N6R1 65 aa4.89□□□□□ -1.63
VAPB-206ENST00000520497 Q96NJ1 140 aa4.89□□□□□ -1.63
VAPB-206ENST00000520497 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
VAPB-206ENST00000520497 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
VAPB-206ENST00000520497 UQCRQO14949 82 aa4.88□□□□□ -1.63
VAPB-206ENST00000520497 CASC2Q6XLA1 102 aa4.88□□□□□ -1.63
VAPB-206ENST00000520497 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
VAPB-206ENST00000520497 COX7CP15954 63 aa4.87□□□□□ -1.63
VAPB-206ENST00000520497 IGHV6-1A0A0B4J1U7 121 aa4.86□□□□□ -1.63
VAPB-206ENST00000520497 WFDC13Q8IUB5 93 aa4.86□□□□□ -1.63
VAPB-206ENST00000520497 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
VAPB-206ENST00000520497 C8orf17Q9NRJ1 99 aa4.85□□□□□ -1.63
VAPB-206ENST00000520497 hDV103S1A0JD37 113 aa4.84□□□□□ -1.63
VAPB-206ENST00000520497 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
VAPB-206ENST00000520497 C1orf195Q5TG92 126 aa4.84□□□□□ -1.63
VAPB-206ENST00000520497 MMP24-AS1A0A0U1RRL7 71 aa4.83□□□□□ -1.64
VAPB-206ENST00000520497 KRTAP19-4Q3LI73 84 aa4.83□□□□□ -1.64
VAPB-206ENST00000520497 TMEM254Q8TBM7 123 aa4.83□□□□□ -1.64
VAPB-206ENST00000520497 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
VAPB-206ENST00000520497 TP53AIP1Q9HCN2 124 aa4.82□□□□□ -1.64
VAPB-206ENST00000520497 LINC00313P59037 77 aa4.81□□□□□ -1.64
VAPB-206ENST00000520497 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
VAPB-206ENST00000520497 H3BS24 57 aa4.8□□□□□ -1.64
VAPB-206ENST00000520497 MP68P56378 58 aa4.8□□□□□ -1.64
VAPB-206ENST00000520497 MRPL34Q9BQ48 92 aaKnown RBP4.8□□□□□ -1.64
VAPB-206ENST00000520497 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
VAPB-206ENST00000520497 CCDC179H3BU77 68 aa4.79□□□□□ -1.64
VAPB-206ENST00000520497 NDUFS5O43920 106 aa4.79□□□□□ -1.64
VAPB-206ENST00000520497 C5orf47Q569G3 176 aa4.79□□□□□ -1.64
VAPB-206ENST00000520497 NDUFC1O43677 76 aa4.78□□□□□ -1.64
VAPB-206ENST00000520497 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
VAPB-206ENST00000520497 H3BPC8 53 aa4.77□□□□□ -1.65
VAPB-206ENST00000520497 RETNLBQ9BQ08 111 aa4.77□□□□□ -1.65
VAPB-206ENST00000520497 KLKP1Q107X0 134 aa4.75□□□□□ -1.65
VAPB-206ENST00000520497 FP248Q71RG6 208 aaPredicted RBP4.75□□□□□ -1.65
VAPB-206ENST00000520497 TRAV22A0A0B4J277 110 aa4.74□□□□□ -1.65
VAPB-206ENST00000520497 H0Y9P7 68 aa4.74□□□□□ -1.65
VAPB-206ENST00000520497 TMEM258P61165 79 aa4.72□□□□□ -1.65
VAPB-206ENST00000520497 NOTCH2NLQ7Z3S9 236 aa4.72□□□□□ -1.65
VAPB-206ENST00000520497 A0A0U1RQV1 116 aa4.71□□□□□ -1.66
VAPB-206ENST00000520497 LRP2P98164 4655 aa4.71□□□□□ -1.66
VAPB-206ENST00000520497 SNURFQ9Y675 71 aa4.71□□□□□ -1.66
VAPB-206ENST00000520497 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
VAPB-206ENST00000520497 Q8N9P0 234 aaPredicted RBP4.7□□□□□ -1.66
VAPB-206ENST00000520497 LINC00208Q96KT6 92 aa4.7□□□□□ -1.66
VAPB-206ENST00000520497 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
VAPB-206ENST00000520497 LOC101927531A0A1B0GV80 90 aa4.69□□□□□ -1.66
VAPB-206ENST00000520497 KRTAP16-1A8MUX0 517 aa4.69□□□□□ -1.66
VAPB-206ENST00000520497 IGLV7-46A0A075B6I9 117 aa4.68□□□□□ -1.66
VAPB-206ENST00000520497 C1orf64Q8NEQ6 169 aa4.68□□□□□ -1.66
VAPB-206ENST00000520497 PRR4Q16378 134 aa4.67□□□□□ -1.66
VAPB-206ENST00000520497 KRTAP13-3Q3SY46 172 aa4.67□□□□□ -1.66
VAPB-206ENST00000520497 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
VAPB-206ENST00000520497 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
VAPB-206ENST00000520497 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
VAPB-206ENST00000520497 TPRXLQ17RH7 258 aa4.66□□□□□ -1.66
VAPB-206ENST00000520497 H7BZZ5 65 aa4.65□□□□□ -1.67
VAPB-206ENST00000520497 ZCCHC13Q8WW36 166 aaKnown RBP4.65□□□□□ -1.67
VAPB-206ENST00000520497 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
VAPB-206ENST00000520497 LPAP08519 4548 aa4.64□□□□□ -1.67
VAPB-206ENST00000520497 C20orf166-AS1Q96NR2 134 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms