RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 UACAQ9BZF9 1416 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 RELNP78509 3460 aa-0.48□□□□□ -2.49
SKP1-207ENST00000520417 SPENQ96T58 3664 aaKnown RBP-0.49□□□□□ -2.49
SKP1-207ENST00000520417 USP32Q8NFA0 1604 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 PCNTO95613 3336 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 VPS13CQ709C8 3753 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 H0YAA0 97 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 DEFB130BP0DP73 79 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 DEFB130AP0DP74 79 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 PRLHP81277 87 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 ANKRD50Q9ULJ7 1429 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 CFAP54Q96N23 3096 aa-0.49□□□□□ -2.49
SKP1-207ENST00000520417 MKI67P46013 3256 aaKnown RBP-0.49□□□□□ -2.49
SKP1-207ENST00000520417 H3BUT2 72 aa-0.5□□□□□ -2.49
SKP1-207ENST00000520417 HMGA1P17096 107 aaKnown RBP-0.5□□□□□ -2.49
SKP1-207ENST00000520417 ATP5EP2Q5VTU8 51 aa-0.5□□□□□ -2.49
SKP1-207ENST00000520417 ABCC3O15438 1527 aa-0.5□□□□□ -2.49
SKP1-207ENST00000520417 NWD1Q149M9 1564 aa-0.5□□□□□ -2.49
SKP1-207ENST00000520417 DOT1LQ8TEK3 1739 aa-0.5□□□□□ -2.49
SKP1-207ENST00000520417 DNAH10Q8IVF4 4471 aa-0.5□□□□□ -2.49
SKP1-207ENST00000520417 SPTAN1Q13813 2472 aaKnown RBP-0.5□□□□□ -2.49
SKP1-207ENST00000520417 POLR1AO95602 1720 aaPredicted RBP-0.51□□□□□ -2.49
SKP1-207ENST00000520417 IAPPP10997 89 aa-0.51□□□□□ -2.49
SKP1-207ENST00000520417 DEFB121Q5J5C9 76 aa-0.51□□□□□ -2.49
SKP1-207ENST00000520417 TTC37Q6PGP7 1564 aa-0.51□□□□□ -2.49
SKP1-207ENST00000520417 KIF14Q15058 1648 aa-0.52□□□□□ -2.49
SKP1-207ENST00000520417 LYNX1G3V0Z9 82 aa-0.52□□□□□ -2.49
SKP1-207ENST00000520417 S4R3F8 94 aa-0.52□□□□□ -2.49
SKP1-207ENST00000520417 SMG1Q96Q15 3661 aaKnown RBP-0.52□□□□□ -2.49
SKP1-207ENST00000520417 FRYQ5TBA9 3013 aa-0.52□□□□□ -2.49
SKP1-207ENST00000520417 TIAM2Q8IVF5 1701 aa-0.52□□□□□ -2.49
SKP1-207ENST00000520417 VCANP13611 3396 aa-0.53□□□□□ -2.49
SKP1-207ENST00000520417 DNAH14Q0VDD8 3507 aa-0.53□□□□□ -2.49
SKP1-207ENST00000520417 LCE6AA0A183 80 aa-0.53□□□□□ -2.49
SKP1-207ENST00000520417 MRPL33O75394 65 aaKnown RBP-0.53□□□□□ -2.49
SKP1-207ENST00000520417 MT1BP07438 61 aa-0.53□□□□□ -2.49
SKP1-207ENST00000520417 MT1HL1P0DM35 61 aa-0.53□□□□□ -2.49
SKP1-207ENST00000520417 CFAP47Q6ZTR5 3102 aa-0.53□□□□□ -2.49
SKP1-207ENST00000520417 C5orf42Q9H799 3197 aa-0.54□□□□□ -2.5
SKP1-207ENST00000520417 SCN11AQ9UI33 1791 aa-0.54□□□□□ -2.5
SKP1-207ENST00000520417 DEFB131BA0A096LNP1 70 aa-0.54□□□□□ -2.5
SKP1-207ENST00000520417 NESP48681 1621 aa-0.54□□□□□ -2.5
SKP1-207ENST00000520417 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.54□□□□□ -2.5
SKP1-207ENST00000520417 USP34Q70CQ2 3546 aa-0.54□□□□□ -2.5
SKP1-207ENST00000520417 PPLO60437 1756 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 ARFGEF2Q9Y6D5 1785 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 ZNF831Q5JPB2 1677 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 TMEM131LA2VDJ0 1609 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 WDFY3Q8IZQ1 3526 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 KRTAP8-1Q8IUC2 63 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 DEFB106AQ8N104 65 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 CEP350Q5VT06 3117 aa-0.55□□□□□ -2.5
SKP1-207ENST00000520417 PIK3C2BO00750 1634 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 PLXNC1O60486 1568 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 DMDP11532 3685 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 H3BVH4 76 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 SMR3BP02814 79 aaPredicted RBP-0.56□□□□□ -2.5
SKP1-207ENST00000520417 CRIP1P50238 77 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 DEFB110Q30KQ9 67 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 BVES-AS1Q5T3Y7 98 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 CDH23Q9H251 3354 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 WIZO95785 1651 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 DEPDC5O75140 1603 aa-0.56□□□□□ -2.5
SKP1-207ENST00000520417 DIP2BQ9P265 1576 aa-0.57□□□□□ -2.5
SKP1-207ENST00000520417 CEP250Q9BV73 2442 aa-0.57□□□□□ -2.5
SKP1-207ENST00000520417 PRUNE2Q8WUY3 3088 aa-0.57□□□□□ -2.5
SKP1-207ENST00000520417 MAGI3Q5TCQ9 1506 aa-0.57□□□□□ -2.5
SKP1-207ENST00000520417 C18orf32Q8TCD1 76 aa-0.57□□□□□ -2.5
SKP1-207ENST00000520417 UBL5Q9BZL1 73 aa-0.57□□□□□ -2.5
SKP1-207ENST00000520417 MAP3K4Q9Y6R4 1608 aa-0.57□□□□□ -2.5
SKP1-207ENST00000520417 CCDC88BA6NC98 1476 aa-0.58□□□□□ -2.5
SKP1-207ENST00000520417 SPTBN5Q9NRC6 3674 aaKnown RBP-0.58□□□□□ -2.5
SKP1-207ENST00000520417 ATMQ13315 3056 aa-0.58□□□□□ -2.5
SKP1-207ENST00000520417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.59□□□□□ -2.56e-14■□□□□ 8.5
SKP1-207ENST00000520417 ENHOQ6UWT2 76 aa-0.59□□□□□ -2.5
SKP1-207ENST00000520417 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.59□□□□□ -2.5
SKP1-207ENST00000520417 DDX60LQ5H9U9 1706 aaKnown RBP-0.59□□□□□ -2.5
SKP1-207ENST00000520417 RANBP2P49792 3224 aaKnown RBP-0.6□□□□□ -2.5
SKP1-207ENST00000520417 KCNQ1DNQ9H478 68 aa-0.6□□□□□ -2.51
SKP1-207ENST00000520417 UTRNP46939 3433 aa-0.6□□□□□ -2.51
SKP1-207ENST00000520417 DNAH12Q6ZR08 3092 aa-0.61□□□□□ -2.51
SKP1-207ENST00000520417 WT1-ASQ06250 92 aa-0.61□□□□□ -2.51
SKP1-207ENST00000520417 MINOS1Q5TGZ0 78 aa-0.61□□□□□ -2.51
SKP1-207ENST00000520417 MAP3K1Q13233 1512 aa-0.61□□□□□ -2.51
SKP1-207ENST00000520417 FRYLO94915 3013 aa-0.62□□□□□ -2.51
SKP1-207ENST00000520417 ETDCA0A1B0GVM5 59 aa-0.62□□□□□ -2.51
SKP1-207ENST00000520417 BRCA2P51587 3418 aa-0.62□□□□□ -2.51
SKP1-207ENST00000520417 CCDC18Q5T9S5 1454 aa-0.62□□□□□ -2.51
SKP1-207ENST00000520417 RALGAPBQ86X10 1494 aa-0.62□□□□□ -2.51
SKP1-207ENST00000520417 PLCH1Q4KWH8 1693 aa-0.62□□□□□ -2.51
SKP1-207ENST00000520417 HFM1A2PYH4 1435 aa-0.63□□□□□ -2.51
SKP1-207ENST00000520417 ABCC1P33527 1531 aa-0.63□□□□□ -2.51
SKP1-207ENST00000520417 ARHGAP35Q9NRY4 1499 aa-0.63□□□□□ -2.51
SKP1-207ENST00000520417 KDM5DQ9BY66 1539 aa-0.64□□□□□ -2.51
SKP1-207ENST00000520417 RICTORQ6R327 1708 aa-0.64□□□□□ -2.51
SKP1-207ENST00000520417 ASPMQ8IZT6 3477 aa-0.64□□□□□ -2.51
SKP1-207ENST00000520417 ERVK-7P63135 1459 aa-0.64□□□□□ -2.51
SKP1-207ENST00000520417 MT1FP04733 61 aa-0.64□□□□□ -2.51
SKP1-207ENST00000520417 SMARCA2P51531 1590 aa-0.65□□□□□ -2.51
SKP1-207ENST00000520417 MED14O60244 1454 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms