RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 TPRXLQ17RH7 258 aa3.76□□□□□ -1.81
SDCBP-208ENST00000520228 LIMD2Q9BT23 127 aa3.76□□□□□ -1.81
SDCBP-208ENST00000520228 A0A0G2JQZ4 141 aa3.75□□□□□ -1.81
SDCBP-208ENST00000520228 K7ERJ3 54 aa3.75□□□□□ -1.81
SDCBP-208ENST00000520228 PPDPFLQ8WWR9 84 aa3.75□□□□□ -1.81
SDCBP-208ENST00000520228 SNHG12Q9BXW3 62 aa3.75□□□□□ -1.81
SDCBP-208ENST00000520228 PSMB2P49721 201 aa3.74□□□□□ -1.81
SDCBP-208ENST00000520228 OCIAD2Q56VL3 154 aa3.74□□□□□ -1.81
SDCBP-208ENST00000520228 Q6JHZ5 121 aa3.74□□□□□ -1.81
SDCBP-208ENST00000520228 A0A1B0GX51 115 aa3.73□□□□□ -1.81
SDCBP-208ENST00000520228 COX6CP09669 75 aa3.72□□□□□ -1.81
SDCBP-208ENST00000520228 Q5XG85 94 aa3.72□□□□□ -1.81
SDCBP-208ENST00000520228 H3BUT2 72 aa3.71□□□□□ -1.82
SDCBP-208ENST00000520228 TCL1BO95988 128 aa3.71□□□□□ -1.82
SDCBP-208ENST00000520228 FABP2P12104 132 aa3.71□□□□□ -1.82
SDCBP-208ENST00000520228 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
SDCBP-208ENST00000520228 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-208ENST00000520228 CLEC2BQ92478 149 aa3.71□□□□□ -1.82
SDCBP-208ENST00000520228 SPRR5A0A1B0GTR4 108 aa3.7□□□□□ -1.82
SDCBP-208ENST00000520228 M0R143 59 aa3.7□□□□□ -1.82
SDCBP-208ENST00000520228 DNAL4O96015 105 aa3.7□□□□□ -1.82
SDCBP-208ENST00000520228 C1orf195Q5TG92 126 aa3.7□□□□□ -1.82
SDCBP-208ENST00000520228 TRBV7-7A0A0K0K1E9 115 aa3.69□□□□□ -1.82
SDCBP-208ENST00000520228 H3BMG7 143 aa3.69□□□□□ -1.82
SDCBP-208ENST00000520228 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
SDCBP-208ENST00000520228 MUC2Q02817 5179 aa3.68□□□□□ -1.82
SDCBP-208ENST00000520228 TSTD3H0UI37 97 aa3.68□□□□□ -1.82
SDCBP-208ENST00000520228 H3BQ85 93 aa3.68□□□□□ -1.82
SDCBP-208ENST00000520228 ORMDL1Q9P0S3 153 aa3.68□□□□□ -1.82
SDCBP-208ENST00000520228 A0A1B0GVX0 72 aa3.67□□□□□ -1.82
SDCBP-208ENST00000520228 TMEM256-PLSCR3K7ERE1 68 aa3.67□□□□□ -1.82
SDCBP-208ENST00000520228 C9orf92A6NGG3 77 aa3.66□□□□□ -1.82
SDCBP-208ENST00000520228 LST1O00453 97 aa3.66□□□□□ -1.82
SDCBP-208ENST00000520228 TRACP01848 142 aa3.66□□□□□ -1.82
SDCBP-208ENST00000520228 ASB16-AS1Q495Z4 193 aa3.66□□□□□ -1.82
SDCBP-208ENST00000520228 Q6Q795 121 aa3.66□□□□□ -1.82
SDCBP-208ENST00000520228 TEN1Q86WV5 123 aa3.66□□□□□ -1.82
SDCBP-208ENST00000520228 ANKRD29Q8N6D5 301 aa3.65□□□□□ -1.83
SDCBP-208ENST00000520228 A0A0U1RQV1 116 aa3.64□□□□□ -1.83
SDCBP-208ENST00000520228 A0A1B0GV72 72 aa3.64□□□□□ -1.83
SDCBP-208ENST00000520228 BATFQ16520 125 aa3.64□□□□□ -1.83
SDCBP-208ENST00000520228 NAA38Q9BRA0 125 aaKnown RBP3.64□□□□□ -1.83
SDCBP-208ENST00000520228 SS18L2Q9UHA2 77 aa3.64□□□□□ -1.83
SDCBP-208ENST00000520228 A0A087WSZ3 146 aa3.63□□□□□ -1.83
SDCBP-208ENST00000520228 A0A1W2PNM2 257 aa3.63□□□□□ -1.83
SDCBP-208ENST00000520228 BAALC-AS2P0C853 105 aa3.63□□□□□ -1.83
SDCBP-208ENST00000520228 ATXN8Q156A1 80 aa3.63□□□□□ -1.83
SDCBP-208ENST00000520228 C5orf47Q569G3 176 aa3.63□□□□□ -1.83
SDCBP-208ENST00000520228 Q5W150 140 aa3.63□□□□□ -1.83
SDCBP-208ENST00000520228 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
SDCBP-208ENST00000520228 TRBV7-4A0A0J9YYF1 115 aa3.62□□□□□ -1.83
SDCBP-208ENST00000520228 CCKP06307 115 aa3.61□□□□□ -1.83
SDCBP-208ENST00000520228 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
SDCBP-208ENST00000520228 LYRM7Q5U5X0 104 aa3.61□□□□□ -1.83
SDCBP-208ENST00000520228 TRBV20-1A0A075B6N2 111 aa3.6□□□□□ -1.83
SDCBP-208ENST00000520228 PCOTHQ58A44 107 aa3.6□□□□□ -1.83
SDCBP-208ENST00000520228 OBSCN-AS1Q96MR7 158 aa3.6□□□□□ -1.83
SDCBP-208ENST00000520228 DSCR8Q96T75 97 aa3.6□□□□□ -1.83
SDCBP-208ENST00000520228 MUC17Q685J3 4493 aa3.6□□□□□ -1.83
SDCBP-208ENST00000520228 C9JAW5 83 aa3.59□□□□□ -1.83
SDCBP-208ENST00000520228 VPS25Q9BRG1 176 aa3.59□□□□□ -1.83
SDCBP-208ENST00000520228 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
SDCBP-208ENST00000520228 TAX1BP3O14907 124 aa3.58□□□□□ -1.84
SDCBP-208ENST00000520228 KRTAP10-10P60014 251 aa3.58□□□□□ -1.84
SDCBP-208ENST00000520228 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
SDCBP-208ENST00000520228 Q96NJ1 140 aa3.58□□□□□ -1.84
SDCBP-208ENST00000520228 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
SDCBP-208ENST00000520228 A0A1W2PPM0 123 aa3.57□□□□□ -1.84
SDCBP-208ENST00000520228 JMJD7-PLA2G4BH0Y9G9 81 aa3.57□□□□□ -1.84
SDCBP-208ENST00000520228 SIGMAR1Q99720 223 aa3.57□□□□□ -1.84
SDCBP-208ENST00000520228 FAT4Q6V0I7 4981 aa3.56□□□□□ -1.84
SDCBP-208ENST00000520228 IGKV4-1P06312 121 aa3.56□□□□□ -1.84
SDCBP-208ENST00000520228 LINC00472Q9H8W2 130 aa3.56□□□□□ -1.84
SDCBP-208ENST00000520228 LOC110117498A0A087WWA1 95 aa3.55□□□□□ -1.84
SDCBP-208ENST00000520228 PDE6GP18545 87 aa3.55□□□□□ -1.84
SDCBP-208ENST00000520228 ATP11AUNQ6ZP68 121 aa3.55□□□□□ -1.84
SDCBP-208ENST00000520228 A0A1B0GV90 55 aa3.54□□□□□ -1.84
SDCBP-208ENST00000520228 LINC00313P59037 77 aa3.54□□□□□ -1.84
SDCBP-208ENST00000520228 COL5A1-AS1Q5SY13 56 aa3.54□□□□□ -1.84
SDCBP-208ENST00000520228 Q6ZQT0 140 aa3.54□□□□□ -1.84
SDCBP-208ENST00000520228 C14orf132Q9NPU4 83 aa3.54□□□□□ -1.84
SDCBP-208ENST00000520228 A0A1B0GW54 56 aa3.53□□□□□ -1.84
SDCBP-208ENST00000520228 H3BT86 120 aa3.53□□□□□ -1.84
SDCBP-208ENST00000520228 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
SDCBP-208ENST00000520228 IGHV6-1A0A0B4J1U7 121 aa3.52□□□□□ -1.85
SDCBP-208ENST00000520228 A8MUU9 505 aa3.52□□□□□ -1.85
SDCBP-208ENST00000520228 J3KT08 172 aa3.52□□□□□ -1.85
SDCBP-208ENST00000520228 C20orf166-AS1Q96NR2 134 aa3.52□□□□□ -1.85
SDCBP-208ENST00000520228 SPCS1Q9Y6A9 102 aa3.52□□□□□ -1.85
SDCBP-208ENST00000520228 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
SDCBP-208ENST00000520228 NDUFB1O75438 58 aa3.49□□□□□ -1.85
SDCBP-208ENST00000520228 NREPQ16612 68 aa3.49□□□□□ -1.85
SDCBP-208ENST00000520228 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
SDCBP-208ENST00000520228 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
SDCBP-208ENST00000520228 A8MWP4 228 aa3.47□□□□□ -1.85
SDCBP-208ENST00000520228 K7EP34 96 aa3.47□□□□□ -1.85
SDCBP-208ENST00000520228 COX6B2Q6YFQ2 88 aa3.47□□□□□ -1.85
SDCBP-208ENST00000520228 IGKV3D-7A0A0C4DH55 119 aa3.46□□□□□ -1.86
SDCBP-208ENST00000520228 GTF2H5Q6ZYL4 71 aa3.45□□□□□ -1.86
SDCBP-208ENST00000520228 PRR15Q8IV56 129 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms