RNA–Protein interactions for RNA: ENST00000519811.5

DENND3-211, Transcript of DENN domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DENND3, Length 5,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-211ENST00000519811 CHD6Q8TD26 2715 aa8.38□□□□□ -1.07
DENND3-211ENST00000519811 UTP20O75691 2785 aaKnown RBP8.36□□□□□ -1.07
DENND3-211ENST00000519811 UNC79Q9P2D8 2635 aa8.36□□□□□ -1.07
DENND3-211ENST00000519811 COL6A5A8TX70 2615 aa8.35□□□□□ -1.07
DENND3-211ENST00000519811 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
DENND3-211ENST00000519811 Q6ZR54 194 aa8.34□□□□□ -1.07
DENND3-211ENST00000519811 A0A087X002 238 aa8.34□□□□□ -1.07
DENND3-211ENST00000519811 KRTAP1-5Q9BYS1 174 aa8.33□□□□□ -1.08
DENND3-211ENST00000519811 NF1P21359 2839 aa8.33□□□□□ -1.08
DENND3-211ENST00000519811 IGSF10Q6WRI0 2623 aa8.3□□□□□ -1.08
DENND3-211ENST00000519811 TEX15Q9BXT5 2789 aa8.3□□□□□ -1.08
DENND3-211ENST00000519811 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
DENND3-211ENST00000519811 HRNRQ86YZ3 2850 aaPredicted RBP8.29□□□□□ -1.08
DENND3-211ENST00000519811 KRTAP26-1Q6PEX3 210 aa8.29□□□□□ -1.08
DENND3-211ENST00000519811 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
DENND3-211ENST00000519811 S4R3F8 94 aa8.27□□□□□ -1.09
DENND3-211ENST00000519811 FBN2P35556 2912 aa8.26□□□□□ -1.09
DENND3-211ENST00000519811 NBEAL2Q6ZNJ1 2754 aa8.26□□□□□ -1.09
DENND3-211ENST00000519811 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.1
DENND3-211ENST00000519811 A8MUU9 505 aa8.2□□□□□ -1.1
DENND3-211ENST00000519811 GCN1Q92616 2671 aaKnown RBP8.19□□□□□ -1.1
DENND3-211ENST00000519811 PANO1I0J062 215 aa8.18□□□□□ -1.1
DENND3-211ENST00000519811 UBR5O95071 2799 aaPredicted RBP8.17□□□□□ -1.1
DENND3-211ENST00000519811 C20orf166-AS1Q96NR2 134 aa8.15□□□□□ -1.11
DENND3-211ENST00000519811 ITPR2Q14571 2701 aa8.14□□□□□ -1.11
DENND3-211ENST00000519811 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
DENND3-211ENST00000519811 NBEAL1Q6ZS30 2694 aa8.13□□□□□ -1.11
DENND3-211ENST00000519811 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
DENND3-211ENST00000519811 RPS29P62273 56 aaKnown RBP8.11□□□□□ -1.11
DENND3-211ENST00000519811 R4GN34 69 aa8.11□□□□□ -1.11
DENND3-211ENST00000519811 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
DENND3-211ENST00000519811 NOTCH1P46531 2555 aa8.08□□□□□ -1.12
DENND3-211ENST00000519811 KRTAP11-1Q8IUC1 163 aa8.04□□□□□ -1.12
DENND3-211ENST00000519811 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
DENND3-211ENST00000519811 M0QZ58 72 aa8.01□□□□□ -1.13
DENND3-211ENST00000519811 NSD1Q96L73 2696 aaPredicted RBP8.01□□□□□ -1.13
DENND3-211ENST00000519811 CSMD2Q7Z408 3487 aa7.99□□□□□ -1.13
DENND3-211ENST00000519811 KRTAP4-16G5E9R7 235 aaPredicted RBP7.99□□□□□ -1.13
DENND3-211ENST00000519811 APCP25054 2843 aa7.94□□□□□ -1.14
DENND3-211ENST00000519811 KMT2BQ9UMN6 2715 aaPredicted RBP7.94□□□□□ -1.14
DENND3-211ENST00000519811 BSNQ9UPA5 3926 aa7.93□□□□□ -1.14
DENND3-211ENST00000519811 NOTCH2NLQ7Z3S9 236 aa7.91□□□□□ -1.14
DENND3-211ENST00000519811 FLG2Q5D862 2391 aaPredicted RBP7.91□□□□□ -1.14
DENND3-211ENST00000519811 STAB2Q8WWQ8 2551 aa7.87□□□□□ -1.15
DENND3-211ENST00000519811 HIVEP1P15822 2718 aa7.86□□□□□ -1.15
DENND3-211ENST00000519811 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
DENND3-211ENST00000519811 VPS13CQ709C8 3753 aa7.81□□□□□ -1.16
DENND3-211ENST00000519811 DMBT1Q9UGM3 2413 aaPredicted RBP7.78□□□□□ -1.16
DENND3-211ENST00000519811 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
DENND3-211ENST00000519811 KRTAP13-1Q8IUC0 172 aa7.74□□□□□ -1.17
DENND3-211ENST00000519811 VWFP04275 2813 aa7.73□□□□□ -1.17
DENND3-211ENST00000519811 PDZD2O15018 2839 aa7.73□□□□□ -1.17
DENND3-211ENST00000519811 KRTAP13-2Q52LG2 175 aa7.72□□□□□ -1.17
DENND3-211ENST00000519811 P0C880 135 aa7.7□□□□□ -1.18
DENND3-211ENST00000519811 TENM4Q6N022 2769 aa7.69□□□□□ -1.18
DENND3-211ENST00000519811 TENM1Q9UKZ4 2725 aa7.66□□□□□ -1.18
DENND3-211ENST00000519811 FBN1P35555 2871 aaKnown RBP7.65□□□□□ -1.18
DENND3-211ENST00000519811 H0YAA0 97 aa7.65□□□□□ -1.18
DENND3-211ENST00000519811 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.19
DENND3-211ENST00000519811 OTOGQ6ZRI0 2925 aa7.62□□□□□ -1.19
DENND3-211ENST00000519811 NBPF19A0A087WUL8 3843 aa7.6□□□□□ -1.19
DENND3-211ENST00000519811 PP632Q6XCG6 107 aa7.58□□□□□ -1.2
DENND3-211ENST00000519811 TNP1P09430 55 aa7.53□□□□□ -1.2
DENND3-211ENST00000519811 PKD1L1Q8TDX9 2849 aa7.52□□□□□ -1.21
DENND3-211ENST00000519811 TPRXLQ17RH7 258 aa7.48□□□□□ -1.21
DENND3-211ENST00000519811 TENM3Q9P273 2699 aa7.46□□□□□ -1.22
DENND3-211ENST00000519811 KRTAP10-8P60410 259 aa7.43□□□□□ -1.22
DENND3-211ENST00000519811 KRTAP1-4P0C5Y4 121 aa7.42□□□□□ -1.22
DENND3-211ENST00000519811 XP32Q5T750 250 aa7.41□□□□□ -1.22
DENND3-211ENST00000519811 ZNF469Q96JG9 3925 aaPredicted RBP7.38□□□□□ -1.23
DENND3-211ENST00000519811 TENM2Q9NT68 2774 aa7.37□□□□□ -1.23
DENND3-211ENST00000519811 TRRAPQ9Y4A5 3859 aa7.32□□□□□ -1.24
DENND3-211ENST00000519811 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
DENND3-211ENST00000519811 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
DENND3-211ENST00000519811 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
DENND3-211ENST00000519811 AKAP9Q99996 3911 aa7.18□□□□□ -1.26
DENND3-211ENST00000519811 KRTAP10-10P60014 251 aa7.17□□□□□ -1.26
DENND3-211ENST00000519811 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
DENND3-211ENST00000519811 TGP01266 2768 aa7.06□□□□□ -1.28
DENND3-211ENST00000519811 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
DENND3-211ENST00000519811 KRTAP12-2P59991 146 aa7.04□□□□□ -1.28
DENND3-211ENST00000519811 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
DENND3-211ENST00000519811 CSMD3Q7Z407 3707 aa6.98□□□□□ -1.29
DENND3-211ENST00000519811 INE1O15225 51 aa6.96□□□□□ -1.3
DENND3-211ENST00000519811 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
DENND3-211ENST00000519811 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
DENND3-211ENST00000519811 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
DENND3-211ENST00000519811 FBN3Q75N90 2809 aa6.78□□□□□ -1.32
DENND3-211ENST00000519811 MEGF8Q7Z7M0 2845 aa6.61□□□□□ -1.35
DENND3-211ENST00000519811 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
DENND3-211ENST00000519811 ANK2Q01484 3957 aa6.54□□□□□ -1.36
DENND3-211ENST00000519811 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
DENND3-211ENST00000519811 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
DENND3-211ENST00000519811 DNAH10Q8IVF4 4471 aa6.4□□□□□ -1.39
DENND3-211ENST00000519811 LYSTQ99698 3801 aa6.32□□□□□ -1.4
DENND3-211ENST00000519811 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
DENND3-211ENST00000519811 HUWE1Q7Z6Z7 4374 aaKnown RBP6.3□□□□□ -1.4
DENND3-211ENST00000519811 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
DENND3-211ENST00000519811 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
DENND3-211ENST00000519811 CMYA5Q8N3K9 4069 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms