RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 STAB1Q9NY15 2570 aa0.09□□□□□ -2.4
PTPN12-213ENST00000519553 SPTBN4Q9H254 2564 aa0.08□□□□□ -2.4
PTPN12-213ENST00000519553 SPRR2AP35326 72 aa0.08□□□□□ -2.4
PTPN12-213ENST00000519553 STAB2Q8WWQ8 2551 aa0.08□□□□□ -2.4
PTPN12-213ENST00000519553 SETD2Q9BYW2 2564 aaPredicted RBP0.08□□□□□ -2.4
PTPN12-213ENST00000519553 AGLP35573 1532 aa0.08□□□□□ -2.4
PTPN12-213ENST00000519553 DNAH3Q8TD57 4116 aa0.07□□□□□ -2.4
PTPN12-213ENST00000519553 DNAH9Q9NYC9 4486 aa0.07□□□□□ -2.4
PTPN12-213ENST00000519553 SONP18583 2426 aaKnown RBP0.07□□□□□ -2.4
PTPN12-213ENST00000519553 SVEP1Q4LDE5 3571 aa0.07□□□□□ -2.4
PTPN12-213ENST00000519553 C9orf92A6NGG3 77 aa0.07□□□□□ -2.4
PTPN12-213ENST00000519553 TMEM167BQ9NRX6 74 aa0.07□□□□□ -2.4
PTPN12-213ENST00000519553 FANCD2Q9BXW9 1451 aa0.07□□□□□ -2.4
PTPN12-213ENST00000519553 SPG11Q96JI7 2443 aa0.06□□□□□ -2.4
PTPN12-213ENST00000519553 H0YGX0 51 aa0.06□□□□□ -2.4
PTPN12-213ENST00000519553 H3BUA1 57 aa0.06□□□□□ -2.4
PTPN12-213ENST00000519553 EPG5Q9HCE0 2579 aa0.06□□□□□ -2.4
PTPN12-213ENST00000519553 PDZD2O15018 2839 aa0.05□□□□□ -2.4
PTPN12-213ENST00000519553 AKAP9Q99996 3911 aa0.05□□□□□ -2.4
PTPN12-213ENST00000519553 KRTAP6-2Q3LI66 62 aa0.05□□□□□ -2.4
PTPN12-213ENST00000519553 LINC00308Q8TCZ7 52 aa0.05□□□□□ -2.4
PTPN12-213ENST00000519553 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
PTPN12-213ENST00000519553 GCN1Q92616 2671 aaKnown RBP0.05□□□□□ -2.4
PTPN12-213ENST00000519553 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
PTPN12-213ENST00000519553 NBEAL1Q6ZS30 2694 aa0.04□□□□□ -2.4
PTPN12-213ENST00000519553 DMXL1Q9Y485 3027 aa0.04□□□□□ -2.4
PTPN12-213ENST00000519553 MTORP42345 2549 aa0.04□□□□□ -2.4
PTPN12-213ENST00000519553 TIMM8BQ9Y5J9 83 aaPredicted RBP0.04□□□□□ -2.4
PTPN12-213ENST00000519553 TGP01266 2768 aa0.03□□□□□ -2.4
PTPN12-213ENST00000519553 ANK3Q12955 4377 aaKnown RBP0.03□□□□□ -2.4
PTPN12-213ENST00000519553 ABCA5Q8WWZ7 1642 aa0.03□□□□□ -2.4
PTPN12-213ENST00000519553 NRXN3Q9Y4C0 1643 aa0.03□□□□□ -2.4
PTPN12-213ENST00000519553 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.4
PTPN12-213ENST00000519553 TACC2O95359 2948 aa0.03□□□□□ -2.4
PTPN12-213ENST00000519553 PLNP26678 52 aa0.03□□□□□ -2.4
PTPN12-213ENST00000519553 SYNE2Q8WXH0 6885 aaKnown RBP0.03□□□□□ -2.4
PTPN12-213ENST00000519553 ANKRD11Q6UB99 2663 aaPredicted RBP0.03□□□□□ -2.4
PTPN12-213ENST00000519553 LRRK2Q5S007 2527 aa0.03□□□□□ -2.41
PTPN12-213ENST00000519553 SACSQ9NZJ4 4579 aa0.03□□□□□ -2.41
PTPN12-213ENST00000519553 HTTP42858 3142 aa0.02□□□□□ -2.41
PTPN12-213ENST00000519553 PKHD1L1Q86WI1 4243 aa0.02□□□□□ -2.41
PTPN12-213ENST00000519553 ABCC8Q09428 1581 aa0.02□□□□□ -2.41
PTPN12-213ENST00000519553 ANKHD1Q8IWZ3 2542 aaKnown RBP0.02□□□□□ -2.41
PTPN12-213ENST00000519553 IGLV5-48A0A075B6I7 105 aa0.01□□□□□ -2.41
PTPN12-213ENST00000519553 H3BNG1 76 aa0.01□□□□□ -2.41
PTPN12-213ENST00000519553 HIVEP1P15822 2718 aa0.01□□□□□ -2.41
PTPN12-213ENST00000519553 FAM186AA6NE01 2351 aa0.01□□□□□ -2.41
PTPN12-213ENST00000519553 SRRM2Q9UQ35 2752 aaKnown RBP0□□□□□ -2.41
PTPN12-213ENST00000519553 SPRR2EP22531 72 aa0□□□□□ -2.41
PTPN12-213ENST00000519553 FASNP49327 2511 aaKnown RBP0□□□□□ -2.41
PTPN12-213ENST00000519553 EFCAB6Q5THR3 1501 aa0□□□□□ -2.41
PTPN12-213ENST00000519553 TEP1Q99973 2627 aaKnown RBP0□□□□□ -2.41
PTPN12-213ENST00000519553 MXRA5Q9NR99 2828 aa0□□□□□ -2.41
PTPN12-213ENST00000519553 CMC2Q9NRP2 79 aa0□□□□□ -2.41
PTPN12-213ENST00000519553 NBPF19A0A087WUL8 3843 aa-0□□□□□ -2.41
PTPN12-213ENST00000519553 UTP20O75691 2785 aaKnown RBP-0□□□□□ -2.41
PTPN12-213ENST00000519553 ACACAQ13085 2346 aa-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 LMO7Q8WWI1 1683 aa-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 A0A0C4DFX4 3053 aa-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 APOBP04114 4563 aaKnown RBP-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 KALRNO60229 2985 aa-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 NBEAQ8NFP9 2946 aa-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 MT1AP04731 61 aa-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 SPENQ96T58 3664 aaKnown RBP-0.01□□□□□ -2.41
PTPN12-213ENST00000519553 KIF21BO75037 1637 aa-0.02□□□□□ -2.41
PTPN12-213ENST00000519553 KRTAP6-1Q3LI64 71 aa-0.02□□□□□ -2.41
PTPN12-213ENST00000519553 NOP10Q9NPE3 64 aaKnown RBP-0.02□□□□□ -2.41
PTPN12-213ENST00000519553 DNAH6Q9C0G6 4158 aa-0.02□□□□□ -2.41
PTPN12-213ENST00000519553 MUC2Q02817 5179 aa-0.02□□□□□ -2.41
PTPN12-213ENST00000519553 RIF1Q5UIP0 2472 aaKnown RBP-0.03□□□□□ -2.41
PTPN12-213ENST00000519553 VPS13DQ5THJ4 4388 aa-0.03□□□□□ -2.41
PTPN12-213ENST00000519553 SNRPGP15A8MWD9 76 aa-0.03□□□□□ -2.41
PTPN12-213ENST00000519553 RANBP2P49792 3224 aaKnown RBP-0.03□□□□□ -2.41
PTPN12-213ENST00000519553 WDR87Q6ZQQ6 2873 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 A0A1B0GUL6 1792 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 SSPOA2VEC9 5147 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 LAMA1P25391 3075 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 ITPR3Q14573 2671 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 LINC01546A6NGU7 62 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 KRTAP19-7Q3SYF9 63 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 DNAH2Q9P225 4427 aa-0.04□□□□□ -2.42
PTPN12-213ENST00000519553 NBEAL2Q6ZNJ1 2754 aa-0.05□□□□□ -2.42
PTPN12-213ENST00000519553 DNAH11Q96DT5 4516 aa-0.05□□□□□ -2.42
PTPN12-213ENST00000519553 MGAM2Q2M2H8 2515 aa-0.05□□□□□ -2.42
PTPN12-213ENST00000519553 MYO18BQ8IUG5 2567 aa-0.05□□□□□ -2.42
PTPN12-213ENST00000519553 USP9YO00507 2555 aaPredicted RBP-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 MMP24-AS1A0A0U1RRL7 71 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 SMIM27A0A1W2PRY6 76 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 DEFB110Q30KQ9 67 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 KRTAP19-8Q3LI54 63 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 SPRR2FQ96RM1 72 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 ABRACLQ9P1F3 81 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 LAMA5O15230 3695 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 FRYQ5TBA9 3013 aa-0.06□□□□□ -2.42
PTPN12-213ENST00000519553 CCDC168Q8NDH2 2452 aa-0.07□□□□□ -2.42
PTPN12-213ENST00000519553 DSTQ03001 7570 aaKnown RBP-0.07□□□□□ -2.42
PTPN12-213ENST00000519553 IQGAP1P46940 1657 aa-0.07□□□□□ -2.42
PTPN12-213ENST00000519553 TNP1P09430 55 aa-0.07□□□□□ -2.42
PTPN12-213ENST00000519553 ACACBO00763 2458 aa-0.07□□□□□ -2.42
PTPN12-213ENST00000519553 SPTBN5Q9NRC6 3674 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms