RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 ROMO1P60602 79 aa1.98□□□□□ -2.09
CSMD3-209ENST00000519485 CASC10Q5T4H9 136 aa1.98□□□□□ -2.09
CSMD3-209ENST00000519485 USP9XQ93008 2570 aaPredicted RBP1.97□□□□□ -2.09
CSMD3-209ENST00000519485 ASPMQ8IZT6 3477 aa1.97□□□□□ -2.09
CSMD3-209ENST00000519485 CHTF8P0CG12 524 aa1.97□□□□□ -2.09
CSMD3-209ENST00000519485 SPINK6Q6UWN8 80 aa1.97□□□□□ -2.09
CSMD3-209ENST00000519485 SPACA4Q8TDM5 124 aa1.97□□□□□ -2.09
CSMD3-209ENST00000519485 NAV2Q8IVL1 2488 aa1.97□□□□□ -2.09
CSMD3-209ENST00000519485 UTP20O75691 2785 aaKnown RBP1.97□□□□□ -2.09
CSMD3-209ENST00000519485 USP9YO00507 2555 aaPredicted RBP1.97□□□□□ -2.09
CSMD3-209ENST00000519485 MXRA5Q9NR99 2828 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 ITPR1Q14643 2758 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 A0A1B0GU33 70 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 J3QKU1 62 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 COX6B2Q6YFQ2 88 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 CIRBP-AS1Q8TBR5 109 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 JMJD1CQ15652 2540 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 ASH1LQ9NR48 2969 aaKnown RBP1.96□□□□□ -2.1
CSMD3-209ENST00000519485 TTC28Q96AY4 2481 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 MUC6Q6W4X9 2439 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 DMXL1Q9Y485 3027 aa1.96□□□□□ -2.1
CSMD3-209ENST00000519485 TEX15Q9BXT5 2789 aa1.95□□□□□ -2.1
CSMD3-209ENST00000519485 NBDYA0A0U1RRE5 68 aa1.95□□□□□ -2.1
CSMD3-209ENST00000519485 NUPR2A6NF83 97 aa1.95□□□□□ -2.1
CSMD3-209ENST00000519485 A8MUU9 505 aa1.95□□□□□ -2.1
CSMD3-209ENST00000519485 FN1P02751 2386 aaKnown RBP1.95□□□□□ -2.1
CSMD3-209ENST00000519485 IGF2RP11717 2491 aa1.95□□□□□ -2.1
CSMD3-209ENST00000519485 HIVEP2P31629 2446 aa1.95□□□□□ -2.1
CSMD3-209ENST00000519485 PTPN13Q12923 2485 aa1.94□□□□□ -2.1
CSMD3-209ENST00000519485 PANO1I0J062 215 aa1.94□□□□□ -2.1
CSMD3-209ENST00000519485 PSORS1C2Q9UIG4 136 aa1.94□□□□□ -2.1
CSMD3-209ENST00000519485 GCN1Q92616 2671 aaKnown RBP1.94□□□□□ -2.1
CSMD3-209ENST00000519485 CRYBG3Q68DQ2 2970 aa1.94□□□□□ -2.1
CSMD3-209ENST00000519485 LRRK2Q5S007 2527 aa1.93□□□□□ -2.1
CSMD3-209ENST00000519485 APCP25054 2843 aa1.93□□□□□ -2.1
CSMD3-209ENST00000519485 H1FX-AS1Q4G0G2 97 aa1.93□□□□□ -2.1
CSMD3-209ENST00000519485 APLNQ9ULZ1 77 aa1.93□□□□□ -2.1
CSMD3-209ENST00000519485 COL12A1Q99715 3063 aa1.93□□□□□ -2.1
CSMD3-209ENST00000519485 ACACBO00763 2458 aa1.93□□□□□ -2.1
CSMD3-209ENST00000519485 EPG5Q9HCE0 2579 aa1.93□□□□□ -2.1
CSMD3-209ENST00000519485 KMT2BQ9UMN6 2715 aaPredicted RBP1.92□□□□□ -2.1
CSMD3-209ENST00000519485 K7EIL1 84 aa1.92□□□□□ -2.1
CSMD3-209ENST00000519485 SPINK1P00995 79 aa1.92□□□□□ -2.1
CSMD3-209ENST00000519485 RPS29P62273 56 aaKnown RBP1.92□□□□□ -2.1
CSMD3-209ENST00000519485 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
CSMD3-209ENST00000519485 ZFYVE26Q68DK2 2539 aa1.92□□□□□ -2.1
CSMD3-209ENST00000519485 SVEP1Q4LDE5 3571 aa1.91□□□□□ -2.1
CSMD3-209ENST00000519485 CHD8Q9HCK8 2581 aa1.91□□□□□ -2.1
CSMD3-209ENST00000519485 A0A087WTM6 91 aa1.91□□□□□ -2.1
CSMD3-209ENST00000519485 SPINT4Q6UDR6 99 aa1.91□□□□□ -2.1
CSMD3-209ENST00000519485 ITPR3Q14573 2671 aa1.91□□□□□ -2.1
CSMD3-209ENST00000519485 MYO18BQ8IUG5 2567 aa1.91□□□□□ -2.1
CSMD3-209ENST00000519485 CELSR2Q9HCU4 2923 aa1.9□□□□□ -2.1
CSMD3-209ENST00000519485 NBEAL2Q6ZNJ1 2754 aa1.9□□□□□ -2.1
CSMD3-209ENST00000519485 SPTBN4Q9H254 2564 aa1.9□□□□□ -2.11
CSMD3-209ENST00000519485 LAMA5O15230 3695 aa1.9□□□□□ -2.11
CSMD3-209ENST00000519485 Q6ZSA8 131 aa1.9□□□□□ -2.11
CSMD3-209ENST00000519485 SMR3AQ99954 134 aa1.9□□□□□ -2.11
CSMD3-209ENST00000519485 CRIPTQ9P021 101 aa1.9□□□□□ -2.11
CSMD3-209ENST00000519485 FAM208BQ5VWN6 2430 aa1.89□□□□□ -2.11
CSMD3-209ENST00000519485 RPL37P61927 97 aaKnown RBP1.89□□□□□ -2.11
CSMD3-209ENST00000519485 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
CSMD3-209ENST00000519485 UBR5O95071 2799 aaPredicted RBP1.89□□□□□ -2.11
CSMD3-209ENST00000519485 TENM2Q9NT68 2774 aa1.89□□□□□ -2.11
CSMD3-209ENST00000519485 ABCA12Q86UK0 2595 aa1.89□□□□□ -2.11
CSMD3-209ENST00000519485 RELNP78509 3460 aa1.89□□□□□ -2.11
CSMD3-209ENST00000519485 CFAP46Q8IYW2 2715 aa1.89□□□□□ -2.11
CSMD3-209ENST00000519485 PKD1L2Q7Z442 2459 aa1.89□□□□□ -2.11
CSMD3-209ENST00000519485 H0YAA0 97 aa1.88□□□□□ -2.11
CSMD3-209ENST00000519485 FLNAP21333 2647 aaKnown RBP1.88□□□□□ -2.11
CSMD3-209ENST00000519485 PIEZO1Q92508 2521 aa1.88□□□□□ -2.11
CSMD3-209ENST00000519485 ZANQ9Y493 2812 aa1.88□□□□□ -2.11
CSMD3-209ENST00000519485 SONP18583 2426 aaKnown RBP1.88□□□□□ -2.11
CSMD3-209ENST00000519485 NBPF19A0A087WUL8 3843 aa1.88□□□□□ -2.11
CSMD3-209ENST00000519485 MUC3AQ02505 3323 aa1.88□□□□□ -2.11
CSMD3-209ENST00000519485 FLNCQ14315 2725 aa1.87□□□□□ -2.11
CSMD3-209ENST00000519485 VPS13CQ709C8 3753 aa1.87□□□□□ -2.11
CSMD3-209ENST00000519485 POLQO75417 2590 aa1.87□□□□□ -2.11
CSMD3-209ENST00000519485 UNC79Q9P2D8 2635 aa1.87□□□□□ -2.11
CSMD3-209ENST00000519485 CENPEQ02224 2701 aa1.86□□□□□ -2.11
CSMD3-209ENST00000519485 FBN2P35556 2912 aa1.86□□□□□ -2.11
CSMD3-209ENST00000519485 KRTAP10-10P60014 251 aa1.86□□□□□ -2.11
CSMD3-209ENST00000519485 ALMS1Q8TCU4 4167 aa1.86□□□□□ -2.11
CSMD3-209ENST00000519485 MTORP42345 2549 aa1.86□□□□□ -2.11
CSMD3-209ENST00000519485 SETD2Q9BYW2 2564 aaPredicted RBP1.86□□□□□ -2.11
CSMD3-209ENST00000519485 IGSF10Q6WRI0 2623 aa1.86□□□□□ -2.11
CSMD3-209ENST00000519485 NF1P21359 2839 aa1.85□□□□□ -2.11
CSMD3-209ENST00000519485 AKAP9Q99996 3911 aa1.85□□□□□ -2.11
CSMD3-209ENST00000519485 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
CSMD3-209ENST00000519485 C20orf166-AS1Q96NR2 134 aa1.85□□□□□ -2.11
CSMD3-209ENST00000519485 ZNF462Q96JM2 2506 aa1.84□□□□□ -2.11
CSMD3-209ENST00000519485 CCDC168Q8NDH2 2452 aa1.84□□□□□ -2.12
CSMD3-209ENST00000519485 CACNA1AO00555 2505 aa1.84□□□□□ -2.12
CSMD3-209ENST00000519485 HIVEP1P15822 2718 aa1.83□□□□□ -2.12
CSMD3-209ENST00000519485 F8P00451 2351 aa1.83□□□□□ -2.12
CSMD3-209ENST00000519485 NIPBLQ6KC79 2804 aaeCLIP1.83□□□□□ -2.12
CSMD3-209ENST00000519485 TEP1Q99973 2627 aaKnown RBP1.83□□□□□ -2.12
CSMD3-209ENST00000519485 P0C880 135 aa1.82□□□□□ -2.12
CSMD3-209ENST00000519485 KRTAP13-2Q52LG2 175 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms