RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KRTAP29-1A8MX34 341 aaPredicted RBP8.35□□□□□ -1.07
CLN8-204ENST00000519254 NDUFB1O75438 58 aa8.34□□□□□ -1.07
CLN8-204ENST00000519254 ASB16-AS1Q495Z4 193 aa8.34□□□□□ -1.07
CLN8-204ENST00000519254 WFDC13Q8IUB5 93 aa8.34□□□□□ -1.07
CLN8-204ENST00000519254 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
CLN8-204ENST00000519254 CYSTM1Q9H1C7 97 aa8.33□□□□□ -1.08
CLN8-204ENST00000519254 Q5XG85 94 aa8.32□□□□□ -1.08
CLN8-204ENST00000519254 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
CLN8-204ENST00000519254 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
CLN8-204ENST00000519254 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
CLN8-204ENST00000519254 CASC2Q6XLA1 102 aa8.3□□□□□ -1.08
CLN8-204ENST00000519254 LRP1Q07954 4544 aaKnown RBP8.3□□□□□ -1.08
CLN8-204ENST00000519254 C20orf197Q8N268 126 aa8.3□□□□□ -1.08
CLN8-204ENST00000519254 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
CLN8-204ENST00000519254 IGHV6-1A0A0B4J1U7 121 aa8.27□□□□□ -1.08
CLN8-204ENST00000519254 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.08
CLN8-204ENST00000519254 SPINK1P00995 79 aa8.27□□□□□ -1.09
CLN8-204ENST00000519254 OXTP01178 125 aa8.27□□□□□ -1.09
CLN8-204ENST00000519254 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
CLN8-204ENST00000519254 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
CLN8-204ENST00000519254 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
CLN8-204ENST00000519254 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
CLN8-204ENST00000519254 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
CLN8-204ENST00000519254 hDV103S1A0JD37 113 aa8.25□□□□□ -1.09
CLN8-204ENST00000519254 J3QL48 77 aa8.25□□□□□ -1.09
CLN8-204ENST00000519254 NOTCH2NLQ7Z3S9 236 aa8.25□□□□□ -1.09
CLN8-204ENST00000519254 KLKP1Q107X0 134 aa8.24□□□□□ -1.09
CLN8-204ENST00000519254 LIMD2Q9BT23 127 aa8.24□□□□□ -1.09
CLN8-204ENST00000519254 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
CLN8-204ENST00000519254 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
CLN8-204ENST00000519254 TNXBP22105 4242 aa8.21□□□□□ -1.09
CLN8-204ENST00000519254 A0A0U1RQV1 116 aa8.2□□□□□ -1.1
CLN8-204ENST00000519254 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
CLN8-204ENST00000519254 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
CLN8-204ENST00000519254 H7BZZ5 65 aa8.17□□□□□ -1.1
CLN8-204ENST00000519254 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
CLN8-204ENST00000519254 MRPL34Q9BQ48 92 aaKnown RBP8.16□□□□□ -1.1
CLN8-204ENST00000519254 C8orf87E5RJ46 101 aa8.15□□□□□ -1.1
CLN8-204ENST00000519254 TMEM258P61165 79 aa8.14□□□□□ -1.11
CLN8-204ENST00000519254 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
CLN8-204ENST00000519254 LINC00313P59037 77 aa8.12□□□□□ -1.11
CLN8-204ENST00000519254 NDUFC1O43677 76 aa8.12□□□□□ -1.11
CLN8-204ENST00000519254 TP53AIP1Q9HCN2 124 aa8.12□□□□□ -1.11
CLN8-204ENST00000519254 H0Y9P7 68 aa8.11□□□□□ -1.11
CLN8-204ENST00000519254 DMBT1Q9UGM3 2413 aaPredicted RBP8.11□□□□□ -1.11
CLN8-204ENST00000519254 PCLOQ9Y6V0 5065 aa8.1□□□□□ -1.11
CLN8-204ENST00000519254 NDUFS5O43920 106 aa8.1□□□□□ -1.11
CLN8-204ENST00000519254 MP68P56378 58 aa8.1□□□□□ -1.11
CLN8-204ENST00000519254 TRAV22A0A0B4J277 110 aa8.08□□□□□ -1.12
CLN8-204ENST00000519254 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
CLN8-204ENST00000519254 LINC00208Q96KT6 92 aa8.07□□□□□ -1.12
CLN8-204ENST00000519254 H3BPC8 53 aa8.06□□□□□ -1.12
CLN8-204ENST00000519254 Q8N9P0 234 aaPredicted RBP8.05□□□□□ -1.12
CLN8-204ENST00000519254 FAM236DA0A1B0GTK5 79 aa8.03□□□□□ -1.12
CLN8-204ENST00000519254 FAM236CP0DP71 79 aa8.03□□□□□ -1.12
CLN8-204ENST00000519254 C1orf64Q8NEQ6 169 aa8.03□□□□□ -1.12
CLN8-204ENST00000519254 Q5W150 140 aa8.02□□□□□ -1.13
CLN8-204ENST00000519254 PRR4Q16378 134 aa8.01□□□□□ -1.13
CLN8-204ENST00000519254 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
CLN8-204ENST00000519254 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
CLN8-204ENST00000519254 FP248Q71RG6 208 aaPredicted RBP7.98□□□□□ -1.13
CLN8-204ENST00000519254 C9orf92A6NGG3 77 aa7.97□□□□□ -1.13
CLN8-204ENST00000519254 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.14
CLN8-204ENST00000519254 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
CLN8-204ENST00000519254 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.14
CLN8-204ENST00000519254 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
CLN8-204ENST00000519254 SERP1Q9Y6X1 66 aa7.89□□□□□ -1.15
CLN8-204ENST00000519254 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
CLN8-204ENST00000519254 CYP4F30PQ9H0H9 118 aa7.87□□□□□ -1.15
CLN8-204ENST00000519254 C20orf166-AS1Q96NR2 134 aa7.86□□□□□ -1.15
CLN8-204ENST00000519254 A8MUU9 505 aa7.85□□□□□ -1.15
CLN8-204ENST00000519254 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
CLN8-204ENST00000519254 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
CLN8-204ENST00000519254 XP32Q5T750 250 aa7.8□□□□□ -1.16
CLN8-204ENST00000519254 HERC1Q15751 4861 aa7.79□□□□□ -1.16
CLN8-204ENST00000519254 IGKV2D-30A0A075B6S6 120 aa7.76□□□□□ -1.17
CLN8-204ENST00000519254 Q75L30 129 aa7.76□□□□□ -1.17
CLN8-204ENST00000519254 HRES1P13985 223 aa7.75□□□□□ -1.17
CLN8-204ENST00000519254 LPAP08519 4548 aa7.74□□□□□ -1.17
CLN8-204ENST00000519254 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.17
CLN8-204ENST00000519254 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
CLN8-204ENST00000519254 C7orf65Q6ZTY9 151 aa7.7□□□□□ -1.18
CLN8-204ENST00000519254 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
CLN8-204ENST00000519254 HMCN2Q8NDA2 5059 aa7.67□□□□□ -1.18
CLN8-204ENST00000519254 COA5Q86WW8 74 aa7.66□□□□□ -1.18
CLN8-204ENST00000519254 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
CLN8-204ENST00000519254 LRP2P98164 4655 aa7.62□□□□□ -1.19
CLN8-204ENST00000519254 SPINK7P58062 85 aa7.62□□□□□ -1.19
CLN8-204ENST00000519254 ACYP2P14621 99 aa7.61□□□□□ -1.19
CLN8-204ENST00000519254 PRO0628Q9UI54 55 aa7.6□□□□□ -1.19
CLN8-204ENST00000519254 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.2
CLN8-204ENST00000519254 C4orf26Q17RF5 130 aa7.57□□□□□ -1.2
CLN8-204ENST00000519254 MPLKIPQ8TAP9 179 aa7.57□□□□□ -1.2
CLN8-204ENST00000519254 SEC61GP60059 68 aa7.56□□□□□ -1.2
CLN8-204ENST00000519254 Q1T7F1 81 aa7.54□□□□□ -1.2
CLN8-204ENST00000519254 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
CLN8-204ENST00000519254 V9GYY9 64 aa7.51□□□□□ -1.21
CLN8-204ENST00000519254 A8MUN3 132 aa7.49□□□□□ -1.21
CLN8-204ENST00000519254 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
CLN8-204ENST00000519254 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms