RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 RPL37P61927 97 aaKnown RBP4.62□□□□□ -1.67
TRIM35-202ENST00000519219 COX6B2Q6YFQ2 88 aa4.62□□□□□ -1.67
TRIM35-202ENST00000519219 FAM240AA0A1B0GVK7 77 aa4.61□□□□□ -1.67
TRIM35-202ENST00000519219 CCKP06307 115 aa4.61□□□□□ -1.67
TRIM35-202ENST00000519219 SMIM29Q86T20 159 aa4.61□□□□□ -1.67
TRIM35-202ENST00000519219 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
TRIM35-202ENST00000519219 Q6ZQT0 140 aa4.6□□□□□ -1.67
TRIM35-202ENST00000519219 USH2AO75445 5202 aa4.59□□□□□ -1.67
TRIM35-202ENST00000519219 TRBV7-4A0A0J9YYF1 115 aa4.59□□□□□ -1.67
TRIM35-202ENST00000519219 CD164Q04900 197 aa4.59□□□□□ -1.67
TRIM35-202ENST00000519219 Q6JHZ5 121 aa4.59□□□□□ -1.67
TRIM35-202ENST00000519219 Q5XG85 94 aa4.58□□□□□ -1.68
TRIM35-202ENST00000519219 UBL5Q9BZL1 73 aa4.57□□□□□ -1.68
TRIM35-202ENST00000519219 IGFL1Q6UW32 110 aa4.56□□□□□ -1.68
TRIM35-202ENST00000519219 Q6Q795 121 aa4.54□□□□□ -1.68
TRIM35-202ENST00000519219 LINC00846Q9NV44 126 aa4.54□□□□□ -1.68
TRIM35-202ENST00000519219 A0A1B0GW54 56 aa4.53□□□□□ -1.68
TRIM35-202ENST00000519219 A0A1W2PNM2 257 aa4.53□□□□□ -1.68
TRIM35-202ENST00000519219 NREPQ16612 68 aa4.53□□□□□ -1.68
TRIM35-202ENST00000519219 LINC00643Q86TS7 51 aa4.53□□□□□ -1.68
TRIM35-202ENST00000519219 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
TRIM35-202ENST00000519219 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
TRIM35-202ENST00000519219 A0A087WSZ3 146 aa4.51□□□□□ -1.69
TRIM35-202ENST00000519219 ATP5EP2Q5VTU8 51 aa4.51□□□□□ -1.69
TRIM35-202ENST00000519219 Q6ZVQ6 151 aa4.51□□□□□ -1.69
TRIM35-202ENST00000519219 SIGMAR1Q99720 223 aa4.51□□□□□ -1.69
TRIM35-202ENST00000519219 SS18L2Q9UHA2 77 aa4.51□□□□□ -1.69
TRIM35-202ENST00000519219 IGKV3D-7A0A0C4DH55 119 aa4.49□□□□□ -1.69
TRIM35-202ENST00000519219 TRBV7-7A0A0K0K1E9 115 aa4.49□□□□□ -1.69
TRIM35-202ENST00000519219 MT-ATP8P03928 68 aa4.49□□□□□ -1.69
TRIM35-202ENST00000519219 BPY2O14599 106 aa4.48□□□□□ -1.69
TRIM35-202ENST00000519219 HIST1H4AP62805 103 aaKnown RBP4.47□□□□□ -1.69
TRIM35-202ENST00000519219 Q75L30 129 aa4.47□□□□□ -1.69
TRIM35-202ENST00000519219 CXCL6P80162 114 aa4.46□□□□□ -1.7
TRIM35-202ENST00000519219 LCE2BO14633 110 aa4.45□□□□□ -1.7
TRIM35-202ENST00000519219 MT2AP02795 61 aa4.45□□□□□ -1.7
TRIM35-202ENST00000519219 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
TRIM35-202ENST00000519219 J3KT08 172 aa4.44□□□□□ -1.7
TRIM35-202ENST00000519219 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
TRIM35-202ENST00000519219 MT1FP04733 61 aa4.43□□□□□ -1.7
TRIM35-202ENST00000519219 DEFB116Q30KQ4 102 aa4.43□□□□□ -1.7
TRIM35-202ENST00000519219 Q96NJ1 140 aa4.43□□□□□ -1.7
TRIM35-202ENST00000519219 IMUPQ9GZP8 106 aa4.43□□□□□ -1.7
TRIM35-202ENST00000519219 IGKV4-1P06312 121 aa4.42□□□□□ -1.7
TRIM35-202ENST00000519219 NDUFB1O75438 58 aa4.41□□□□□ -1.7
TRIM35-202ENST00000519219 A0A087WVE0 104 aa4.4□□□□□ -1.71
TRIM35-202ENST00000519219 SCGB1A1P11684 91 aa4.4□□□□□ -1.71
TRIM35-202ENST00000519219 Q8N9L7 120 aa4.4□□□□□ -1.71
TRIM35-202ENST00000519219 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.71
TRIM35-202ENST00000519219 FAM236AA0A1B0GUQ0 79 aa4.39□□□□□ -1.71
TRIM35-202ENST00000519219 FAM236BA0A1B0GV22 79 aa4.39□□□□□ -1.71
TRIM35-202ENST00000519219 A8MUU9 505 aa4.39□□□□□ -1.71
TRIM35-202ENST00000519219 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
TRIM35-202ENST00000519219 K7EQZ3 153 aa4.39□□□□□ -1.71
TRIM35-202ENST00000519219 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
TRIM35-202ENST00000519219 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
TRIM35-202ENST00000519219 A8MWP4 228 aa4.38□□□□□ -1.71
TRIM35-202ENST00000519219 DSCR10P59022 87 aa4.37□□□□□ -1.71
TRIM35-202ENST00000519219 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
TRIM35-202ENST00000519219 A0A1B0GVX0 72 aa4.35□□□□□ -1.71
TRIM35-202ENST00000519219 HCG22E2RYF7 251 aa4.35□□□□□ -1.71
TRIM35-202ENST00000519219 ATOX1O00244 68 aa4.35□□□□□ -1.71
TRIM35-202ENST00000519219 PRR15Q8IV56 129 aa4.35□□□□□ -1.71
TRIM35-202ENST00000519219 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
TRIM35-202ENST00000519219 WFDC13Q8IUB5 93 aa4.34□□□□□ -1.71
TRIM35-202ENST00000519219 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.71
TRIM35-202ENST00000519219 HRES1P13985 223 aa4.33□□□□□ -1.72
TRIM35-202ENST00000519219 CASC2Q6XLA1 102 aa4.33□□□□□ -1.72
TRIM35-202ENST00000519219 MPLKIPQ8TAP9 179 aa4.33□□□□□ -1.72
TRIM35-202ENST00000519219 FAM236DA0A1B0GTK5 79 aa4.32□□□□□ -1.72
TRIM35-202ENST00000519219 C8orf87E5RJ46 101 aa4.32□□□□□ -1.72
TRIM35-202ENST00000519219 FAM236CP0DP71 79 aa4.32□□□□□ -1.72
TRIM35-202ENST00000519219 C8orf17Q9NRJ1 99 aa4.32□□□□□ -1.72
TRIM35-202ENST00000519219 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
TRIM35-202ENST00000519219 NOTCH2NLQ7Z3S9 236 aa4.31□□□□□ -1.72
TRIM35-202ENST00000519219 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
TRIM35-202ENST00000519219 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
TRIM35-202ENST00000519219 NDUFS5O43920 106 aa4.3□□□□□ -1.72
TRIM35-202ENST00000519219 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
TRIM35-202ENST00000519219 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
TRIM35-202ENST00000519219 PCP4P48539 62 aa4.29□□□□□ -1.72
TRIM35-202ENST00000519219 LINC00313P59037 77 aa4.29□□□□□ -1.72
TRIM35-202ENST00000519219 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
TRIM35-202ENST00000519219 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
TRIM35-202ENST00000519219 TMEM254Q8TBM7 123 aa4.28□□□□□ -1.72
TRIM35-202ENST00000519219 MRPL34Q9BQ48 92 aaKnown RBP4.27□□□□□ -1.73
TRIM35-202ENST00000519219 TRAV7A0A075B6U4 112 aa4.26□□□□□ -1.73
TRIM35-202ENST00000519219 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
TRIM35-202ENST00000519219 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
TRIM35-202ENST00000519219 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
TRIM35-202ENST00000519219 COX7CP15954 63 aa4.24□□□□□ -1.73
TRIM35-202ENST00000519219 UQCRQO14949 82 aa4.23□□□□□ -1.73
TRIM35-202ENST00000519219 TP53AIP1Q9HCN2 124 aa4.23□□□□□ -1.73
TRIM35-202ENST00000519219 MP68P56378 58 aa4.22□□□□□ -1.73
TRIM35-202ENST00000519219 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
TRIM35-202ENST00000519219 TRAV22A0A0B4J277 110 aa4.2□□□□□ -1.74
TRIM35-202ENST00000519219 H0Y9P7 68 aa4.2□□□□□ -1.74
TRIM35-202ENST00000519219 CCDC179H3BU77 68 aa4.2□□□□□ -1.74
TRIM35-202ENST00000519219 C5orf47Q569G3 176 aa4.2□□□□□ -1.74
TRIM35-202ENST00000519219 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms