RNA–Protein interactions for RNA: ENST00000518883.6

LETM2-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 2

Gene LETM2, Length 2,250 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-204ENST00000518883 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
LETM2-204ENST00000518883 NOTCH2NLQ7Z3S9 236 aa11.94□□□□□ -0.5
LETM2-204ENST00000518883 MRPL34Q9BQ48 92 aaKnown RBP11.94□□□□□ -0.5
LETM2-204ENST00000518883 DNAH11Q96DT5 4516 aa11.93□□□□□ -0.5
LETM2-204ENST00000518883 SSBP3-AS1Q7Z2R9 100 aa11.9□□□□□ -0.5
LETM2-204ENST00000518883 CD164Q04900 197 aa11.89□□□□□ -0.51
LETM2-204ENST00000518883 Q1T7F1 81 aa11.89□□□□□ -0.51
LETM2-204ENST00000518883 PCOTHQ58A44 107 aa11.88□□□□□ -0.51
LETM2-204ENST00000518883 KRTAP10-1P60331 282 aa11.87□□□□□ -0.51
LETM2-204ENST00000518883 Q6ZSA8 131 aa11.86□□□□□ -0.51
LETM2-204ENST00000518883 IGLV7-46A0A075B6I9 117 aa11.84□□□□□ -0.51
LETM2-204ENST00000518883 PRO0628Q9UI54 55 aa11.84□□□□□ -0.51
LETM2-204ENST00000518883 BRK1Q8WUW1 75 aa11.81□□□□□ -0.52
LETM2-204ENST00000518883 PKD1P98161 4303 aa11.81□□□□□ -0.52
LETM2-204ENST00000518883 HYDINQ4G0P3 5121 aa11.81□□□□□ -0.52
LETM2-204ENST00000518883 KRTAP13-2Q52LG2 175 aa11.79□□□□□ -0.52
LETM2-204ENST00000518883 PSPHP1O15172 72 aa11.76□□□□□ -0.53
LETM2-204ENST00000518883 FAT2Q9NYQ8 4349 aa11.76□□□□□ -0.53
LETM2-204ENST00000518883 COA5Q86WW8 74 aa11.74□□□□□ -0.53
LETM2-204ENST00000518883 C8orf87E5RJ46 101 aa11.74□□□□□ -0.53
LETM2-204ENST00000518883 LRP1BQ9NZR2 4599 aa11.73□□□□□ -0.53
LETM2-204ENST00000518883 V9GYY9 64 aa11.73□□□□□ -0.53
LETM2-204ENST00000518883 Q5W150 140 aa11.72□□□□□ -0.53
LETM2-204ENST00000518883 LOC101927531A0A1B0GV80 90 aa11.69□□□□□ -0.54
LETM2-204ENST00000518883 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
LETM2-204ENST00000518883 KRTAP1-4P0C5Y4 121 aa11.68□□□□□ -0.54
LETM2-204ENST00000518883 LINC00313P59037 77 aa11.68□□□□□ -0.54
LETM2-204ENST00000518883 KRTAP13-3Q3SY46 172 aa11.68□□□□□ -0.54
LETM2-204ENST00000518883 Q8N9P0 234 aaPredicted RBP11.68□□□□□ -0.54
LETM2-204ENST00000518883 A8MUN3 132 aa11.67□□□□□ -0.54
LETM2-204ENST00000518883 LIMD2Q9BT23 127 aa11.62□□□□□ -0.55
LETM2-204ENST00000518883 VPS13BQ7Z7G8 4022 aa11.61□□□□□ -0.55
LETM2-204ENST00000518883 Q5VV11 94 aa11.59□□□□□ -0.55
LETM2-204ENST00000518883 PLA2G1BP04054 148 aaKnown RBP11.58□□□□□ -0.55
LETM2-204ENST00000518883 HRES1P13985 223 aa11.58□□□□□ -0.55
LETM2-204ENST00000518883 PRR15LQ9BU68 103 aa11.57□□□□□ -0.56
LETM2-204ENST00000518883 RETNLBQ9BQ08 111 aa11.56□□□□□ -0.56
LETM2-204ENST00000518883 FAM229AH3BQW9 127 aa11.55□□□□□ -0.56
LETM2-204ENST00000518883 TYMSOSQ8TAI1 123 aa11.55□□□□□ -0.56
LETM2-204ENST00000518883 C4orf48Q5BLP8 95 aa11.55□□□□□ -0.56
LETM2-204ENST00000518883 KRTAP16-1A8MUX0 517 aa11.52□□□□□ -0.56
LETM2-204ENST00000518883 CHKB-CPT1BH3BT56 60 aa11.49□□□□□ -0.57
LETM2-204ENST00000518883 SPAG11AQ6PDA7 123 aa11.49□□□□□ -0.57
LETM2-204ENST00000518883 SPINK1P00995 79 aa11.47□□□□□ -0.57
LETM2-204ENST00000518883 SACSQ9NZJ4 4579 aa11.45□□□□□ -0.58
LETM2-204ENST00000518883 IGKV2-30P06310 120 aa11.44□□□□□ -0.58
LETM2-204ENST00000518883 LINC01558Q9Y6Z2 57 aa11.44□□□□□ -0.58
LETM2-204ENST00000518883 PKHD1P08F94 4074 aa11.44□□□□□ -0.58
LETM2-204ENST00000518883 Q75L30 129 aa11.43□□□□□ -0.58
LETM2-204ENST00000518883 ACYP2P14621 99 aa11.42□□□□□ -0.58
LETM2-204ENST00000518883 PRR26Q8N8Z3 221 aa11.42□□□□□ -0.58
LETM2-204ENST00000518883 SMR3BP02814 79 aaPredicted RBP11.39□□□□□ -0.59
LETM2-204ENST00000518883 DMAC1Q96GE9 116 aa11.39□□□□□ -0.59
LETM2-204ENST00000518883 A8MU10 97 aa11.38□□□□□ -0.59
LETM2-204ENST00000518883 LINC00304Q8N9R0 145 aa11.38□□□□□ -0.59
LETM2-204ENST00000518883 A6NED7 52 aa11.35□□□□□ -0.59
LETM2-204ENST00000518883 IGKV2D-30A0A075B6S6 120 aa11.33□□□□□ -0.6
LETM2-204ENST00000518883 RPS29P62273 56 aaKnown RBP11.31□□□□□ -0.6
LETM2-204ENST00000518883 DYNC1H1Q14204 4646 aaKnown RBP11.3□□□□□ -0.6
LETM2-204ENST00000518883 A0A1B0GVY2 172 aa11.29□□□□□ -0.6
LETM2-204ENST00000518883 LCA10Q71F78 164 aa11.27□□□□□ -0.61
LETM2-204ENST00000518883 RYR2Q92736 4967 aa11.25□□□□□ -0.61
LETM2-204ENST00000518883 KMT2CQ8NEZ4 4911 aaKnown RBP11.25□□□□□ -0.61
LETM2-204ENST00000518883 KRTAP10-4P60372 401 aaPredicted RBP11.21□□□□□ -0.62
LETM2-204ENST00000518883 SPINK7P58062 85 aa11.2□□□□□ -0.62
LETM2-204ENST00000518883 CDC42SE1Q9NRR8 79 aa11.2□□□□□ -0.62
LETM2-204ENST00000518883 C7orf65Q6ZTY9 151 aa11.18□□□□□ -0.62
LETM2-204ENST00000518883 APOBP04114 4563 aaKnown RBP11.18□□□□□ -0.62
LETM2-204ENST00000518883 SPTSSBQ8NFR3 76 aa11.18□□□□□ -0.62
LETM2-204ENST00000518883 PMAIP1Q13794 54 aa11.15□□□□□ -0.62
LETM2-204ENST00000518883 FAT1Q14517 4588 aa11.15□□□□□ -0.62
LETM2-204ENST00000518883 ATP11AUNQ6ZP68 121 aa11.14□□□□□ -0.63
LETM2-204ENST00000518883 C9orf92A6NGG3 77 aa11.13□□□□□ -0.63
LETM2-204ENST00000518883 PKHD1L1Q86WI1 4243 aa11.12□□□□□ -0.63
LETM2-204ENST00000518883 A0A1B0GU69 56 aa11.08□□□□□ -0.64
LETM2-204ENST00000518883 A8MUU9 505 aa11.05□□□□□ -0.64
LETM2-204ENST00000518883 Q8N1X5 172 aa11.05□□□□□ -0.64
LETM2-204ENST00000518883 C20orf166-AS1Q96NR2 134 aa11.05□□□□□ -0.64
LETM2-204ENST00000518883 RYR3Q15413 4870 aa10.99□□□□□ -0.65
LETM2-204ENST00000518883 A6NN06 94 aa10.96□□□□□ -0.66
LETM2-204ENST00000518883 KTN1-AS1Q86SY8 53 aa10.87□□□□□ -0.67
LETM2-204ENST00000518883 FLG2Q5D862 2391 aaPredicted RBP10.85□□□□□ -0.67
LETM2-204ENST00000518883 UQCR11O14957 56 aa10.85□□□□□ -0.67
LETM2-204ENST00000518883 SPATA8Q6RVD6 105 aa10.84□□□□□ -0.67
LETM2-204ENST00000518883 MIR22HGQ0VDD5 57 aa10.82□□□□□ -0.68
LETM2-204ENST00000518883 KRTAP3-1Q9BYR8 98 aa10.82□□□□□ -0.68
LETM2-204ENST00000518883 Q5VSD8 79 aa10.8□□□□□ -0.68
LETM2-204ENST00000518883 KRTAP10-8P60410 259 aa10.79□□□□□ -0.68
LETM2-204ENST00000518883 SEC61GP60059 68 aa10.78□□□□□ -0.68
LETM2-204ENST00000518883 TNXBP22105 4242 aa10.77□□□□□ -0.69
LETM2-204ENST00000518883 LRP1Q07954 4544 aaKnown RBP10.75□□□□□ -0.69
LETM2-204ENST00000518883 FAT3Q8TDW7 4589 aa10.75□□□□□ -0.69
LETM2-204ENST00000518883 HSPG2P98160 4391 aa10.72□□□□□ -0.69
LETM2-204ENST00000518883 COX6B2Q6YFQ2 88 aa10.67□□□□□ -0.7
LETM2-204ENST00000518883 RYR1P21817 5038 aa10.62□□□□□ -0.71
LETM2-204ENST00000518883 KRTAP17-1Q9BYP8 105 aa10.6□□□□□ -0.71
LETM2-204ENST00000518883 EPPK1P58107 5090 aaKnown RBP10.59□□□□□ -0.71
LETM2-204ENST00000518883 RPL37P61927 97 aaKnown RBP10.59□□□□□ -0.71
LETM2-204ENST00000518883 XP32Q5T750 250 aa10.56□□□□□ -0.72
LETM2-204ENST00000518883 RBM12B-AS1Q9P1G2 102 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms