RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 RYR3Q15413 4870 aa9.56□□□□□ -0.88
PCM1-206ENST00000518537 H7BZZ5 65 aa9.56□□□□□ -0.88
PCM1-206ENST00000518537 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
PCM1-206ENST00000518537 NDUFC1O43677 76 aa9.56□□□□□ -0.88
PCM1-206ENST00000518537 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
PCM1-206ENST00000518537 SPINK1P00995 79 aa9.54□□□□□ -0.88
PCM1-206ENST00000518537 NOTCH2NLQ7Z3S9 236 aa9.53□□□□□ -0.88
PCM1-206ENST00000518537 LINC00304Q8N9R0 145 aa9.53□□□□□ -0.88
PCM1-206ENST00000518537 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
PCM1-206ENST00000518537 MP68P56378 58 aa9.51□□□□□ -0.89
PCM1-206ENST00000518537 MRPL34Q9BQ48 92 aaKnown RBP9.51□□□□□ -0.89
PCM1-206ENST00000518537 C8orf87E5RJ46 101 aa9.5□□□□□ -0.89
PCM1-206ENST00000518537 NDUFS5O43920 106 aa9.5□□□□□ -0.89
PCM1-206ENST00000518537 SPAG11AQ6PDA7 123 aa9.5□□□□□ -0.89
PCM1-206ENST00000518537 H0Y9P7 68 aa9.49□□□□□ -0.89
PCM1-206ENST00000518537 TP53AIP1Q9HCN2 124 aa9.48□□□□□ -0.89
PCM1-206ENST00000518537 FAM236DA0A1B0GTK5 79 aa9.48□□□□□ -0.89
PCM1-206ENST00000518537 FAM236CP0DP71 79 aa9.48□□□□□ -0.89
PCM1-206ENST00000518537 ZCCHC13Q8WW36 166 aaKnown RBP9.47□□□□□ -0.89
PCM1-206ENST00000518537 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
PCM1-206ENST00000518537 LINC00208Q96KT6 92 aa9.46□□□□□ -0.9
PCM1-206ENST00000518537 LINC00313P59037 77 aa9.45□□□□□ -0.9
PCM1-206ENST00000518537 TRAV22A0A0B4J277 110 aa9.44□□□□□ -0.9
PCM1-206ENST00000518537 H3BPC8 53 aa9.44□□□□□ -0.9
PCM1-206ENST00000518537 Q5VSD8 79 aa9.43□□□□□ -0.9
PCM1-206ENST00000518537 FAT1Q14517 4588 aa9.42□□□□□ -0.9
PCM1-206ENST00000518537 ATP5EP56381 51 aaPredicted RBP9.4□□□□□ -0.91
PCM1-206ENST00000518537 C1orf64Q8NEQ6 169 aa9.4□□□□□ -0.91
PCM1-206ENST00000518537 RPS28P62857 69 aaKnown RBP9.36□□□□□ -0.91
PCM1-206ENST00000518537 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
PCM1-206ENST00000518537 KRTAP16-1A8MUX0 517 aa9.31□□□□□ -0.92
PCM1-206ENST00000518537 Q8N9P0 234 aaPredicted RBP9.31□□□□□ -0.92
PCM1-206ENST00000518537 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
PCM1-206ENST00000518537 Q5W150 140 aa9.29□□□□□ -0.92
PCM1-206ENST00000518537 HSPG2P98160 4391 aa9.26□□□□□ -0.93
PCM1-206ENST00000518537 OXTP01178 125 aa9.26□□□□□ -0.93
PCM1-206ENST00000518537 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
PCM1-206ENST00000518537 KRTAP17-1Q9BYP8 105 aa9.26□□□□□ -0.93
PCM1-206ENST00000518537 KRTAP13-3Q3SY46 172 aa9.25□□□□□ -0.93
PCM1-206ENST00000518537 PRR4Q16378 134 aa9.24□□□□□ -0.93
PCM1-206ENST00000518537 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
PCM1-206ENST00000518537 Q8N1X5 172 aa9.24□□□□□ -0.93
PCM1-206ENST00000518537 LOC101927531A0A1B0GV80 90 aa9.23□□□□□ -0.93
PCM1-206ENST00000518537 RETNLBQ9BQ08 111 aa9.23□□□□□ -0.93
PCM1-206ENST00000518537 SPANXA2-OT1Q8N9U9 137 aa9.23□□□□□ -0.93
PCM1-206ENST00000518537 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
PCM1-206ENST00000518537 RYR1P21817 5038 aa9.21□□□□□ -0.93
PCM1-206ENST00000518537 CYP4F30PQ9H0H9 118 aa9.21□□□□□ -0.94
PCM1-206ENST00000518537 C9orf92A6NGG3 77 aa9.17□□□□□ -0.94
PCM1-206ENST00000518537 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.94
PCM1-206ENST00000518537 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
PCM1-206ENST00000518537 FLG2Q5D862 2391 aaPredicted RBP9.11□□□□□ -0.95
PCM1-206ENST00000518537 SMIM26A0A096LP01 95 aa9.1□□□□□ -0.95
PCM1-206ENST00000518537 BIRC6Q9NR09 4857 aa9.1□□□□□ -0.95
PCM1-206ENST00000518537 KIAA1109Q2LD37 5005 aa9.08□□□□□ -0.96
PCM1-206ENST00000518537 LRP1Q07954 4544 aaKnown RBP9.08□□□□□ -0.96
PCM1-206ENST00000518537 A8MUU9 505 aa9.07□□□□□ -0.96
PCM1-206ENST00000518537 C20orf166-AS1Q96NR2 134 aa9.07□□□□□ -0.96
PCM1-206ENST00000518537 TNXBP22105 4242 aa9.07□□□□□ -0.96
PCM1-206ENST00000518537 IGKV2D-30A0A075B6S6 120 aa9.06□□□□□ -0.96
PCM1-206ENST00000518537 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
PCM1-206ENST00000518537 FP248Q71RG6 208 aaPredicted RBP9.05□□□□□ -0.96
PCM1-206ENST00000518537 FAT3Q8TDW7 4589 aa9.04□□□□□ -0.96
PCM1-206ENST00000518537 HRES1P13985 223 aa9.03□□□□□ -0.96
PCM1-206ENST00000518537 COA5Q86WW8 74 aa8.99□□□□□ -0.97
PCM1-206ENST00000518537 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
PCM1-206ENST00000518537 Q75L30 129 aa8.96□□□□□ -0.97
PCM1-206ENST00000518537 KRTAP4-5Q9BYR2 181 aa8.96□□□□□ -0.97
PCM1-206ENST00000518537 SVIPQ8NHG7 77 aa8.95□□□□□ -0.98
PCM1-206ENST00000518537 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
PCM1-206ENST00000518537 C4orf26Q17RF5 130 aa8.93□□□□□ -0.98
PCM1-206ENST00000518537 ACYP2P14621 99 aa8.92□□□□□ -0.98
PCM1-206ENST00000518537 DMAC1Q96GE9 116 aa8.91□□□□□ -0.98
PCM1-206ENST00000518537 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
PCM1-206ENST00000518537 Q1T7F1 81 aa8.86□□□□□ -0.99
PCM1-206ENST00000518537 ATP11AUNQ6ZP68 121 aa8.86□□□□□ -0.99
PCM1-206ENST00000518537 XP32Q5T750 250 aa8.85□□□□□ -0.99
PCM1-206ENST00000518537 MYCBP2O75592 4640 aa8.85□□□□□ -0.99
PCM1-206ENST00000518537 RPL37P61927 97 aaKnown RBP8.85□□□□□ -0.99
PCM1-206ENST00000518537 SPINK7P58062 85 aa8.83□□□□□ -1
PCM1-206ENST00000518537 HERC2O95714 4834 aa8.83□□□□□ -1
PCM1-206ENST00000518537 V9GYY9 64 aa8.82□□□□□ -1
PCM1-206ENST00000518537 CHKB-CPT1BH3BT56 60 aa8.81□□□□□ -1
PCM1-206ENST00000518537 A8MUN3 132 aa8.75□□□□□ -1.01
PCM1-206ENST00000518537 J3QL48 77 aa8.75□□□□□ -1.01
PCM1-206ENST00000518537 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
PCM1-206ENST00000518537 PSPHP1O15172 72 aa8.73□□□□□ -1.01
PCM1-206ENST00000518537 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
PCM1-206ENST00000518537 LINC01558Q9Y6Z2 57 aa8.69□□□□□ -1.02
PCM1-206ENST00000518537 KRTAP3-1Q9BYR8 98 aa8.65□□□□□ -1.03
PCM1-206ENST00000518537 COX6B2Q6YFQ2 88 aa8.64□□□□□ -1.03
PCM1-206ENST00000518537 Q5VV11 94 aa8.62□□□□□ -1.03
PCM1-206ENST00000518537 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
PCM1-206ENST00000518537 PCLOQ9Y6V0 5065 aa8.58□□□□□ -1.04
PCM1-206ENST00000518537 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
PCM1-206ENST00000518537 BRK1Q8WUW1 75 aa8.54□□□□□ -1.04
PCM1-206ENST00000518537 A0A1B0GU69 56 aa8.51□□□□□ -1.05
PCM1-206ENST00000518537 A6NED7 52 aa8.46□□□□□ -1.05
PCM1-206ENST00000518537 SEC61BP60468 96 aaKnown RBP8.46□□□□□ -1.05
PCM1-206ENST00000518537 LPAP08519 4548 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms