RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 SMIM6P0DI80 62 aa9.48□□□□□ -0.89
HOXA3-203ENST00000518451 FLGP20930 4061 aaPredicted RBP9.48□□□□□ -0.89
HOXA3-203ENST00000518451 Q6ZQT0 140 aa9.47□□□□□ -0.89
HOXA3-203ENST00000518451 CRCT1Q9UGL9 99 aa9.47□□□□□ -0.89
HOXA3-203ENST00000518451 PDE6GP18545 87 aa9.46□□□□□ -0.9
HOXA3-203ENST00000518451 LYRM7Q5U5X0 104 aa9.46□□□□□ -0.9
HOXA3-203ENST00000518451 NDUFB1O75438 58 aa9.45□□□□□ -0.9
HOXA3-203ENST00000518451 NAA38Q9BRA0 125 aaKnown RBP9.44□□□□□ -0.9
HOXA3-203ENST00000518451 LOC110117498A0A087WWA1 95 aa9.42□□□□□ -0.9
HOXA3-203ENST00000518451 RBM12B-AS1Q9P1G2 102 aa9.42□□□□□ -0.9
HOXA3-203ENST00000518451 FAM236DA0A1B0GTK5 79 aa9.41□□□□□ -0.9
HOXA3-203ENST00000518451 TSTD3H0UI37 97 aa9.41□□□□□ -0.9
HOXA3-203ENST00000518451 FAM236CP0DP71 79 aa9.41□□□□□ -0.9
HOXA3-203ENST00000518451 FSIP2Q5CZC0 6907 aa9.4□□□□□ -0.9
HOXA3-203ENST00000518451 A8MWP4 228 aa9.34□□□□□ -0.91
HOXA3-203ENST00000518451 BATFQ16520 125 aa9.34□□□□□ -0.91
HOXA3-203ENST00000518451 ZCCHC13Q8WW36 166 aaKnown RBP9.34□□□□□ -0.91
HOXA3-203ENST00000518451 C14orf132Q9NPU4 83 aa9.34□□□□□ -0.91
HOXA3-203ENST00000518451 HRES1P13985 223 aa9.33□□□□□ -0.92
HOXA3-203ENST00000518451 MTURNQ8N3F0 131 aa9.33□□□□□ -0.92
HOXA3-203ENST00000518451 MPLKIPQ8TAP9 179 aa9.33□□□□□ -0.92
HOXA3-203ENST00000518451 NREPQ16612 68 aa9.32□□□□□ -0.92
HOXA3-203ENST00000518451 Q8N9P0 234 aaPredicted RBP9.32□□□□□ -0.92
HOXA3-203ENST00000518451 C8orf17Q9NRJ1 99 aa9.3□□□□□ -0.92
HOXA3-203ENST00000518451 IGKV3D-7A0A0C4DH55 119 aa9.27□□□□□ -0.93
HOXA3-203ENST00000518451 C9orf118A6NHY6 69 aa9.27□□□□□ -0.93
HOXA3-203ENST00000518451 SPINK7P58062 85 aa9.27□□□□□ -0.93
HOXA3-203ENST00000518451 KRTAP9-8Q9BYQ0 159 aa9.26□□□□□ -0.93
HOXA3-203ENST00000518451 H3BT86 120 aa9.25□□□□□ -0.93
HOXA3-203ENST00000518451 Q6ZVQ6 151 aa9.25□□□□□ -0.93
HOXA3-203ENST00000518451 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
HOXA3-203ENST00000518451 A0A1W2PPM0 123 aa9.22□□□□□ -0.93
HOXA3-203ENST00000518451 TAX1BP3O14907 124 aa9.2□□□□□ -0.94
HOXA3-203ENST00000518451 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
HOXA3-203ENST00000518451 TMEM254Q8TBM7 123 aa9.17□□□□□ -0.94
HOXA3-203ENST00000518451 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
HOXA3-203ENST00000518451 MMP24-AS1A0A0U1RRL7 71 aa9.13□□□□□ -0.95
HOXA3-203ENST00000518451 hDV103S1A0JD37 113 aa9.13□□□□□ -0.95
HOXA3-203ENST00000518451 BPY2O14599 106 aa9.13□□□□□ -0.95
HOXA3-203ENST00000518451 MT2AP02795 61 aa9.12□□□□□ -0.95
HOXA3-203ENST00000518451 K7EQZ3 153 aa9.11□□□□□ -0.95
HOXA3-203ENST00000518451 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
HOXA3-203ENST00000518451 NDUFS5O43920 106 aa9.1□□□□□ -0.95
HOXA3-203ENST00000518451 SPCS1Q9Y6A9 102 aa9.1□□□□□ -0.95
HOXA3-203ENST00000518451 KRTAP10-10P60014 251 aa9.08□□□□□ -0.96
HOXA3-203ENST00000518451 MT1FP04733 61 aa9.03□□□□□ -0.96
HOXA3-203ENST00000518451 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
HOXA3-203ENST00000518451 CASC2Q6XLA1 102 aa8.99□□□□□ -0.97
HOXA3-203ENST00000518451 USH2AO75445 5202 aa8.99□□□□□ -0.97
HOXA3-203ENST00000518451 SMCPP49901 116 aaPredicted RBP8.98□□□□□ -0.97
HOXA3-203ENST00000518451 KRTAP9-3Q9BYQ3 159 aa8.97□□□□□ -0.97
HOXA3-203ENST00000518451 UBL5Q9BZL1 73 aa8.97□□□□□ -0.97
HOXA3-203ENST00000518451 H1FX-AS1Q4G0G2 97 aa8.96□□□□□ -0.98
HOXA3-203ENST00000518451 IGKV2D-30A0A075B6S6 120 aa8.95□□□□□ -0.98
HOXA3-203ENST00000518451 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
HOXA3-203ENST00000518451 C7orf65Q6ZTY9 151 aa8.95□□□□□ -0.98
HOXA3-203ENST00000518451 Q8N9L7 120 aa8.95□□□□□ -0.98
HOXA3-203ENST00000518451 HCG22E2RYF7 251 aa8.93□□□□□ -0.98
HOXA3-203ENST00000518451 Q5W150 140 aa8.93□□□□□ -0.98
HOXA3-203ENST00000518451 K7EP34 96 aa8.92□□□□□ -0.98
HOXA3-203ENST00000518451 CXCL6P80162 114 aa8.92□□□□□ -0.98
HOXA3-203ENST00000518451 LCE2BO14633 110 aa8.91□□□□□ -0.98
HOXA3-203ENST00000518451 LINC00846Q9NV44 126 aa8.91□□□□□ -0.98
HOXA3-203ENST00000518451 PRO0461Q9UI25 63 aa8.91□□□□□ -0.98
HOXA3-203ENST00000518451 SSPOA2VEC9 5147 aa8.88□□□□□ -0.99
HOXA3-203ENST00000518451 GTF2H5Q6ZYL4 71 aa8.87□□□□□ -0.99
HOXA3-203ENST00000518451 F8W1H4 67 aa8.82□□□□□ -1
HOXA3-203ENST00000518451 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.79□□□□□ -1
HOXA3-203ENST00000518451 C4orf26Q17RF5 130 aa8.79□□□□□ -1
HOXA3-203ENST00000518451 KRTAP19-1Q8IUB9 90 aa8.79□□□□□ -1
HOXA3-203ENST00000518451 TP53AIP1Q9HCN2 124 aa8.77□□□□□ -1.01
HOXA3-203ENST00000518451 ETDBQ3ZM63 59 aa8.74□□□□□ -1.01
HOXA3-203ENST00000518451 PCP4L1A6NKN8 68 aa8.72□□□□□ -1.01
HOXA3-203ENST00000518451 FCGBPQ9Y6R7 5405 aaPredicted RBP8.72□□□□□ -1.01
HOXA3-203ENST00000518451 KRTAP9-7A8MTY7 169 aa8.7□□□□□ -1.02
HOXA3-203ENST00000518451 KRTAP19-6Q3LI70 58 aa8.65□□□□□ -1.02
HOXA3-203ENST00000518451 C1orf64Q8NEQ6 169 aa8.65□□□□□ -1.02
HOXA3-203ENST00000518451 ACYP1P07311 99 aa8.63□□□□□ -1.03
HOXA3-203ENST00000518451 C5orf47Q569G3 176 aa8.63□□□□□ -1.03
HOXA3-203ENST00000518451 S4R3F8 94 aa8.62□□□□□ -1.03
HOXA3-203ENST00000518451 CSAG1Q6PB30 78 aa8.61□□□□□ -1.03
HOXA3-203ENST00000518451 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
HOXA3-203ENST00000518451 FAM236AA0A1B0GUQ0 79 aa8.56□□□□□ -1.04
HOXA3-203ENST00000518451 FAM236BA0A1B0GV22 79 aa8.56□□□□□ -1.04
HOXA3-203ENST00000518451 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
HOXA3-203ENST00000518451 FAM240AA0A1B0GVK7 77 aa8.53□□□□□ -1.04
HOXA3-203ENST00000518451 ATP5EP2Q5VTU8 51 aa8.53□□□□□ -1.04
HOXA3-203ENST00000518451 LCA10Q71F78 164 aa8.53□□□□□ -1.04
HOXA3-203ENST00000518451 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
HOXA3-203ENST00000518451 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
HOXA3-203ENST00000518451 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
HOXA3-203ENST00000518451 UQCRQO14949 82 aa8.45□□□□□ -1.06
HOXA3-203ENST00000518451 ATOX1O00244 68 aa8.43□□□□□ -1.06
HOXA3-203ENST00000518451 MACF1Q9UPN3 7388 aaKnown RBP8.39□□□□□ -1.07
HOXA3-203ENST00000518451 LINC00643Q86TS7 51 aa8.38□□□□□ -1.07
HOXA3-203ENST00000518451 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
HOXA3-203ENST00000518451 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
HOXA3-203ENST00000518451 H0Y9P7 68 aa8.37□□□□□ -1.07
HOXA3-203ENST00000518451 KLKP1Q107X0 134 aa8.37□□□□□ -1.07
HOXA3-203ENST00000518451 Q5VV11 94 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms