RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 MP68P56378 58 aa15.33■□□□□ 0.04
COL13A1-210ENST00000517713 KMT2CQ8NEZ4 4911 aaKnown RBP15.32■□□□□ 0.04
COL13A1-210ENST00000517713 RPS28P62857 69 aaKnown RBP15.31■□□□□ 0.04
COL13A1-210ENST00000517713 NOTCH2NLQ7Z3S9 236 aa15.31■□□□□ 0.04
COL13A1-210ENST00000517713 H0Y9P7 68 aa15.29■□□□□ 0.04
COL13A1-210ENST00000517713 LIMD2Q9BT23 127 aa15.28■□□□□ 0.04
COL13A1-210ENST00000517713 C4orf48Q5BLP8 95 aa15.27■□□□□ 0.04
COL13A1-210ENST00000517713 C1orf195Q5TG92 126 aa15.27■□□□□ 0.04
COL13A1-210ENST00000517713 MRPL34Q9BQ48 92 aaKnown RBP15.27■□□□□ 0.04
COL13A1-210ENST00000517713 KRTAP10-4P60372 401 aaPredicted RBP15.26■□□□□ 0.03
COL13A1-210ENST00000517713 TP53AIP1Q9HCN2 124 aa15.26■□□□□ 0.03
COL13A1-210ENST00000517713 APOBP04114 4563 aaKnown RBP15.25■□□□□ 0.03
COL13A1-210ENST00000517713 ATP5EP56381 51 aaPredicted RBP15.24■□□□□ 0.03
COL13A1-210ENST00000517713 LINC00208Q96KT6 92 aa15.24■□□□□ 0.03
COL13A1-210ENST00000517713 H3BPC8 53 aa15.23■□□□□ 0.03
COL13A1-210ENST00000517713 PRR26Q8N8Z3 221 aa15.23■□□□□ 0.03
COL13A1-210ENST00000517713 TRAV22A0A0B4J277 110 aa15.22■□□□□ 0.03
COL13A1-210ENST00000517713 NDUFS5O43920 106 aa15.22■□□□□ 0.03
COL13A1-210ENST00000517713 SPINK1P00995 79 aa15.21■□□□□ 0.02
COL13A1-210ENST00000517713 C8orf87E5RJ46 101 aa15.2■□□□□ 0.02
COL13A1-210ENST00000517713 SERP1Q9Y6X1 66 aa15.16■□□□□ 0.02
COL13A1-210ENST00000517713 OXTP01178 125 aa15.14■□□□□ 0.01
COL13A1-210ENST00000517713 C1orf64Q8NEQ6 169 aa15.14■□□□□ 0.01
COL13A1-210ENST00000517713 LINC00304Q8N9R0 145 aa15.14■□□□□ 0.01
COL13A1-210ENST00000517713 LINC00313P59037 77 aa15.12■□□□□ 0.01
COL13A1-210ENST00000517713 SPAG11AQ6PDA7 123 aa15.09■□□□□ 0.01
COL13A1-210ENST00000517713 RPS29P62273 56 aaKnown RBP15.07■□□□□ 0
COL13A1-210ENST00000517713 FAT1Q14517 4588 aa15.07■□□□□ 0
COL13A1-210ENST00000517713 FAM229AH3BQW9 127 aa15□□□□□ -0.01
COL13A1-210ENST00000517713 Q8N9P0 234 aaPredicted RBP14.96□□□□□ -0.01
COL13A1-210ENST00000517713 Q5W150 140 aa14.95□□□□□ -0.02
COL13A1-210ENST00000517713 KRTAP16-1A8MUX0 517 aa14.94□□□□□ -0.02
COL13A1-210ENST00000517713 RYR3Q15413 4870 aa14.94□□□□□ -0.02
COL13A1-210ENST00000517713 PRR4Q16378 134 aa14.93□□□□□ -0.02
COL13A1-210ENST00000517713 CYP4F30PQ9H0H9 118 aa14.93□□□□□ -0.02
COL13A1-210ENST00000517713 SPANXA2-OT1Q8N9U9 137 aa14.93□□□□□ -0.02
COL13A1-210ENST00000517713 KRTAP13-3Q3SY46 172 aa14.92□□□□□ -0.02
COL13A1-210ENST00000517713 PCOTHQ58A44 107 aa14.88□□□□□ -0.03
COL13A1-210ENST00000517713 Q5VSD8 79 aa14.87□□□□□ -0.03
COL13A1-210ENST00000517713 PKHD1L1Q86WI1 4243 aa14.87□□□□□ -0.03
COL13A1-210ENST00000517713 LOC101927531A0A1B0GV80 90 aa14.85□□□□□ -0.03
COL13A1-210ENST00000517713 SMIM26A0A096LP01 95 aa14.82□□□□□ -0.04
COL13A1-210ENST00000517713 IGLV7-46A0A075B6I9 117 aa14.8□□□□□ -0.04
COL13A1-210ENST00000517713 HSPG2P98160 4391 aa14.77□□□□□ -0.04
COL13A1-210ENST00000517713 RETNLBQ9BQ08 111 aa14.77□□□□□ -0.04
COL13A1-210ENST00000517713 FP248Q71RG6 208 aaPredicted RBP14.72□□□□□ -0.05
COL13A1-210ENST00000517713 SVIPQ8NHG7 77 aa14.71□□□□□ -0.05
COL13A1-210ENST00000517713 KRTAP10-8P60410 259 aa14.68□□□□□ -0.06
COL13A1-210ENST00000517713 Q8N1X5 172 aa14.67□□□□□ -0.06
COL13A1-210ENST00000517713 RYR1P21817 5038 aa14.67□□□□□ -0.06
COL13A1-210ENST00000517713 KRTAP17-1Q9BYP8 105 aa14.66□□□□□ -0.06
COL13A1-210ENST00000517713 IGKV2-30P06310 120 aa14.64□□□□□ -0.07
COL13A1-210ENST00000517713 C4orf26Q17RF5 130 aa14.63□□□□□ -0.07
COL13A1-210ENST00000517713 C9orf92A6NGG3 77 aa14.61□□□□□ -0.07
COL13A1-210ENST00000517713 MPLKIPQ8TAP9 179 aa14.56□□□□□ -0.08
COL13A1-210ENST00000517713 COA5Q86WW8 74 aa14.54□□□□□ -0.08
COL13A1-210ENST00000517713 HRES1P13985 223 aa14.53□□□□□ -0.08
COL13A1-210ENST00000517713 TNXBP22105 4242 aa14.53□□□□□ -0.08
COL13A1-210ENST00000517713 FLG2Q5D862 2391 aaPredicted RBP14.53□□□□□ -0.08
COL13A1-210ENST00000517713 LRP1Q07954 4544 aaKnown RBP14.52□□□□□ -0.08
COL13A1-210ENST00000517713 IGKV2D-30A0A075B6S6 120 aa14.51□□□□□ -0.09
COL13A1-210ENST00000517713 C20orf166-AS1Q96NR2 134 aa14.51□□□□□ -0.09
COL13A1-210ENST00000517713 A8MUU9 505 aa14.5□□□□□ -0.09
COL13A1-210ENST00000517713 KIAA1109Q2LD37 5005 aa14.46□□□□□ -0.09
COL13A1-210ENST00000517713 Q1T7F1 81 aa14.43□□□□□ -0.1
COL13A1-210ENST00000517713 FAT3Q8TDW7 4589 aa14.4□□□□□ -0.1
COL13A1-210ENST00000517713 EPPK1P58107 5090 aaKnown RBP14.4□□□□□ -0.1
COL13A1-210ENST00000517713 DMAC1Q96GE9 116 aa14.38□□□□□ -0.11
COL13A1-210ENST00000517713 C7orf65Q6ZTY9 151 aa14.37□□□□□ -0.11
COL13A1-210ENST00000517713 ACYP2P14621 99 aa14.37□□□□□ -0.11
COL13A1-210ENST00000517713 MT1HL1P0DM35 61 aa14.36□□□□□ -0.11
COL13A1-210ENST00000517713 V9GYY9 64 aa14.32□□□□□ -0.12
COL13A1-210ENST00000517713 Q75L30 129 aa14.31□□□□□ -0.12
COL13A1-210ENST00000517713 PSPHP1O15172 72 aa14.2□□□□□ -0.14
COL13A1-210ENST00000517713 DMBT1Q9UGM3 2413 aaPredicted RBP14.19□□□□□ -0.14
COL13A1-210ENST00000517713 MYCBP2O75592 4640 aa14.18□□□□□ -0.14
COL13A1-210ENST00000517713 CHKB-CPT1BH3BT56 60 aa14.17□□□□□ -0.14
COL13A1-210ENST00000517713 A8MUN3 132 aa14.14□□□□□ -0.15
COL13A1-210ENST00000517713 KRTAP4-5Q9BYR2 181 aa14.14□□□□□ -0.15
COL13A1-210ENST00000517713 SPINK7P58062 85 aa14.13□□□□□ -0.15
COL13A1-210ENST00000517713 ATP11AUNQ6ZP68 121 aa14.1□□□□□ -0.15
COL13A1-210ENST00000517713 XP32Q5T750 250 aa14.09□□□□□ -0.15
COL13A1-210ENST00000517713 LINC01558Q9Y6Z2 57 aa14.08□□□□□ -0.15
COL13A1-210ENST00000517713 RPL37P61927 97 aaKnown RBP14.08□□□□□ -0.16
COL13A1-210ENST00000517713 PRR15LQ9BU68 103 aa14.08□□□□□ -0.16
COL13A1-210ENST00000517713 Q5VV11 94 aa14.04□□□□□ -0.16
COL13A1-210ENST00000517713 BRK1Q8WUW1 75 aa13.96□□□□□ -0.17
COL13A1-210ENST00000517713 KRTAP3-1Q9BYR8 98 aa13.91□□□□□ -0.18
COL13A1-210ENST00000517713 TPRXLQ17RH7 258 aa13.88□□□□□ -0.19
COL13A1-210ENST00000517713 PRO0628Q9UI54 55 aa13.85□□□□□ -0.19
COL13A1-210ENST00000517713 COX6B2Q6YFQ2 88 aa13.83□□□□□ -0.2
COL13A1-210ENST00000517713 A0A1B0GU69 56 aa13.74□□□□□ -0.21
COL13A1-210ENST00000517713 A6NED7 52 aa13.74□□□□□ -0.21
COL13A1-210ENST00000517713 SPTSSBQ8NFR3 76 aa13.73□□□□□ -0.21
COL13A1-210ENST00000517713 J3QL48 77 aa13.72□□□□□ -0.21
COL13A1-210ENST00000517713 ABCA13Q86UQ4 5058 aa13.69□□□□□ -0.22
COL13A1-210ENST00000517713 BIRC6Q9NR09 4857 aa13.63□□□□□ -0.23
COL13A1-210ENST00000517713 HERC2O95714 4834 aa13.6□□□□□ -0.23
COL13A1-210ENST00000517713 A8MU10 97 aa13.59□□□□□ -0.23
COL13A1-210ENST00000517713 LCA10Q71F78 164 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms