RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.82
ATP2C1-222ENST00000514654 LINC00483Q53H64 154 aa3.64□□□□□ -1.83
ATP2C1-222ENST00000514654 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
ATP2C1-222ENST00000514654 SPINK7P58062 85 aa3.62□□□□□ -1.83
ATP2C1-222ENST00000514654 NOTCH2NLQ7Z3S9 236 aa3.62□□□□□ -1.83
ATP2C1-222ENST00000514654 TENM2Q9NT68 2774 aa3.62□□□□□ -1.83
ATP2C1-222ENST00000514654 FP248Q71RG6 208 aaPredicted RBP3.62□□□□□ -1.83
ATP2C1-222ENST00000514654 SMG1Q96Q15 3661 aaKnown RBP3.62□□□□□ -1.83
ATP2C1-222ENST00000514654 Q1T7F1 81 aa3.61□□□□□ -1.83
ATP2C1-222ENST00000514654 VWFP04275 2813 aa3.61□□□□□ -1.83
ATP2C1-222ENST00000514654 PDZD2O15018 2839 aa3.61□□□□□ -1.83
ATP2C1-222ENST00000514654 CSMD1Q96PZ7 3565 aa3.6□□□□□ -1.83
ATP2C1-222ENST00000514654 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
ATP2C1-222ENST00000514654 ZFHX3Q15911 3703 aa3.59□□□□□ -1.83
ATP2C1-222ENST00000514654 KRTAP29-1A8MX34 341 aaPredicted RBP3.59□□□□□ -1.83
ATP2C1-222ENST00000514654 OXTP01178 125 aa3.59□□□□□ -1.83
ATP2C1-222ENST00000514654 Q5XG85 94 aa3.59□□□□□ -1.83
ATP2C1-222ENST00000514654 CDC42SE1Q9NRR8 79 aa3.59□□□□□ -1.83
ATP2C1-222ENST00000514654 A0A1B0GU33 70 aa3.58□□□□□ -1.84
ATP2C1-222ENST00000514654 CUBNO60494 3623 aa3.58□□□□□ -1.84
ATP2C1-222ENST00000514654 SVEP1Q4LDE5 3571 aa3.57□□□□□ -1.84
ATP2C1-222ENST00000514654 CRIPTQ9P021 101 aa3.57□□□□□ -1.84
ATP2C1-222ENST00000514654 NBPF19A0A087WUL8 3843 aa3.57□□□□□ -1.84
ATP2C1-222ENST00000514654 TGP01266 2768 aa3.57□□□□□ -1.84
ATP2C1-222ENST00000514654 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
ATP2C1-222ENST00000514654 M0R2T5 61 aa3.55□□□□□ -1.84
ATP2C1-222ENST00000514654 KRTAP13-2Q52LG2 175 aa3.55□□□□□ -1.84
ATP2C1-222ENST00000514654 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
ATP2C1-222ENST00000514654 Q75L30 129 aa3.55□□□□□ -1.84
ATP2C1-222ENST00000514654 Q5VV11 94 aa3.55□□□□□ -1.84
ATP2C1-222ENST00000514654 KTN1-AS1Q86SY8 53 aa3.54□□□□□ -1.84
ATP2C1-222ENST00000514654 CSAG1Q6PB30 78 aa3.54□□□□□ -1.84
ATP2C1-222ENST00000514654 S4R3F8 94 aa3.54□□□□□ -1.84
ATP2C1-222ENST00000514654 CSMD2Q7Z408 3487 aa3.53□□□□□ -1.84
ATP2C1-222ENST00000514654 SRRM2Q9UQ35 2752 aaKnown RBP3.52□□□□□ -1.85
ATP2C1-222ENST00000514654 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
ATP2C1-222ENST00000514654 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
ATP2C1-222ENST00000514654 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
ATP2C1-222ENST00000514654 LCA10Q71F78 164 aa3.5□□□□□ -1.85
ATP2C1-222ENST00000514654 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
ATP2C1-222ENST00000514654 SPENQ96T58 3664 aaKnown RBP3.48□□□□□ -1.85
ATP2C1-222ENST00000514654 ASB16-AS1Q495Z4 193 aa3.48□□□□□ -1.85
ATP2C1-222ENST00000514654 KRTAP21-3Q3LHN1 58 aa3.47□□□□□ -1.85
ATP2C1-222ENST00000514654 R4GN34 69 aa3.47□□□□□ -1.85
ATP2C1-222ENST00000514654 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
ATP2C1-222ENST00000514654 M0QZ58 72 aa3.42□□□□□ -1.86
ATP2C1-222ENST00000514654 RPS29P62273 56 aaKnown RBP3.42□□□□□ -1.86
ATP2C1-222ENST00000514654 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
ATP2C1-222ENST00000514654 ADM2Q7Z4H4 148 aa3.42□□□□□ -1.86
ATP2C1-222ENST00000514654 KRTAP1-4P0C5Y4 121 aa3.41□□□□□ -1.86
ATP2C1-222ENST00000514654 RPL37P61927 97 aaKnown RBP3.41□□□□□ -1.86
ATP2C1-222ENST00000514654 TRRAPQ9Y4A5 3859 aa3.39□□□□□ -1.87
ATP2C1-222ENST00000514654 A8MU10 97 aa3.38□□□□□ -1.87
ATP2C1-222ENST00000514654 FBN3Q75N90 2809 aa3.37□□□□□ -1.87
ATP2C1-222ENST00000514654 A8MUU9 505 aa3.35□□□□□ -1.87
ATP2C1-222ENST00000514654 LCE2DQ5TA82 110 aaPredicted RBP3.34□□□□□ -1.87
ATP2C1-222ENST00000514654 ROMO1P60602 79 aa3.34□□□□□ -1.87
ATP2C1-222ENST00000514654 C20orf166-AS1Q96NR2 134 aa3.34□□□□□ -1.88
ATP2C1-222ENST00000514654 BSNQ9UPA5 3926 aa3.33□□□□□ -1.88
ATP2C1-222ENST00000514654 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
ATP2C1-222ENST00000514654 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
ATP2C1-222ENST00000514654 XP32Q5T750 250 aa3.31□□□□□ -1.88
ATP2C1-222ENST00000514654 COL7A1Q02388 2944 aa3.3□□□□□ -1.88
ATP2C1-222ENST00000514654 MEGF8Q7Z7M0 2845 aa3.28□□□□□ -1.88
ATP2C1-222ENST00000514654 PLAC4Q8WY50 150 aa3.28□□□□□ -1.89
ATP2C1-222ENST00000514654 KRTAP16-1A8MUX0 517 aa3.27□□□□□ -1.89
ATP2C1-222ENST00000514654 A6NN06 94 aa3.27□□□□□ -1.89
ATP2C1-222ENST00000514654 A0A1B0GVY2 172 aa3.25□□□□□ -1.89
ATP2C1-222ENST00000514654 VPS13CQ709C8 3753 aa3.23□□□□□ -1.89
ATP2C1-222ENST00000514654 KRTAP13-3Q3SY46 172 aa3.21□□□□□ -1.89
ATP2C1-222ENST00000514654 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
ATP2C1-222ENST00000514654 TPRXLQ17RH7 258 aa3.2□□□□□ -1.9
ATP2C1-222ENST00000514654 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
ATP2C1-222ENST00000514654 H0YAA0 97 aa3.17□□□□□ -1.9
ATP2C1-222ENST00000514654 P0C880 135 aa3.16□□□□□ -1.9
ATP2C1-222ENST00000514654 H3BS24 57 aa3.15□□□□□ -1.9
ATP2C1-222ENST00000514654 ZNF469Q96JG9 3925 aaPredicted RBP3.15□□□□□ -1.9
ATP2C1-222ENST00000514654 KRTAP3-3Q9BYR6 98 aa3.14□□□□□ -1.91
ATP2C1-222ENST00000514654 KRTAP3-2Q9BYR7 98 aa3.14□□□□□ -1.91
ATP2C1-222ENST00000514654 C10orf95Q9H7T3 257 aa3.14□□□□□ -1.91
ATP2C1-222ENST00000514654 CSMD3Q7Z407 3707 aa3.12□□□□□ -1.91
ATP2C1-222ENST00000514654 TNP1P09430 55 aa3.11□□□□□ -1.91
ATP2C1-222ENST00000514654 KRTAP10-10P60014 251 aa3.1□□□□□ -1.91
ATP2C1-222ENST00000514654 A0A0A0MQY5 61 aa3.08□□□□□ -1.92
ATP2C1-222ENST00000514654 HUWE1Q7Z6Z7 4374 aaKnown RBP3.07□□□□□ -1.92
ATP2C1-222ENST00000514654 KRTAP3-1Q9BYR8 98 aa3.07□□□□□ -1.92
ATP2C1-222ENST00000514654 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
ATP2C1-222ENST00000514654 DNHD1Q96M86 4753 aa3.02□□□□□ -1.93
ATP2C1-222ENST00000514654 AKAP9Q99996 3911 aa3.01□□□□□ -1.93
ATP2C1-222ENST00000514654 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
ATP2C1-222ENST00000514654 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
ATP2C1-222ENST00000514654 KRTAP12-2P59991 146 aa3□□□□□ -1.93
ATP2C1-222ENST00000514654 KRTAP10-4P60372 401 aaPredicted RBP2.98□□□□□ -1.93
ATP2C1-222ENST00000514654 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
ATP2C1-222ENST00000514654 DNAH9Q9NYC9 4486 aa2.96□□□□□ -1.94
ATP2C1-222ENST00000514654 KRTAP12-1P59990 96 aa2.94□□□□□ -1.94
ATP2C1-222ENST00000514654 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
ATP2C1-222ENST00000514654 DNAH5Q8TE73 4624 aa2.94□□□□□ -1.94
ATP2C1-222ENST00000514654 KRTAP10-6P60371 365 aaPredicted RBP2.93□□□□□ -1.94
ATP2C1-222ENST00000514654 PLECQ15149 4684 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms