RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 TMEM191AQ9H0A3 160 aa1.7□□□□□ -2.14
RFC1-216ENST00000514572 KANTRA0A1W2PQU2 76 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 F8VRH5 84 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 SPINK1P00995 79 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 IFI27P40305 119 aaPredicted RBP1.69□□□□□ -2.14
RFC1-216ENST00000514572 SEC11AP67812 179 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 Q8IZM0 81 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 BRK1Q8WUW1 75 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 C20orf78Q9BR46 151 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 C2orf88Q9BSF0 95 aa1.69□□□□□ -2.14
RFC1-216ENST00000514572 FLGP20930 4061 aaPredicted RBP1.68□□□□□ -2.14
RFC1-216ENST00000514572 HIGD1CA8MV81 97 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 C9JAW5 83 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 F8W1H4 67 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 TRACP01848 142 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 CKS2P33552 79 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 RPL39P62891 51 aaKnown RBP1.68□□□□□ -2.14
RFC1-216ENST00000514572 Q5BKY6 102 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 CLEC2BQ92478 149 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 TMEM141Q96I45 108 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 TOMM7Q9P0U1 55 aa1.68□□□□□ -2.14
RFC1-216ENST00000514572 DPM2O94777 84 aa1.67□□□□□ -2.14
RFC1-216ENST00000514572 S100A8P05109 93 aa1.67□□□□□ -2.14
RFC1-216ENST00000514572 RPS29P62273 56 aaKnown RBP1.67□□□□□ -2.14
RFC1-216ENST00000514572 MT1HP80294 61 aa1.67□□□□□ -2.14
RFC1-216ENST00000514572 COX6B2Q6YFQ2 88 aa1.67□□□□□ -2.14
RFC1-216ENST00000514572 SMIM2Q9BVW6 85 aa1.67□□□□□ -2.14
RFC1-216ENST00000514572 KRTAP4-1Q9BYQ7 146 aa1.67□□□□□ -2.14
RFC1-216ENST00000514572 UQCRQO14949 82 aa1.66□□□□□ -2.14
RFC1-216ENST00000514572 PRLHP81277 87 aa1.66□□□□□ -2.14
RFC1-216ENST00000514572 TEN1Q86WV5 123 aa1.66□□□□□ -2.14
RFC1-216ENST00000514572 D6R8Y8 96 aa1.65□□□□□ -2.15
RFC1-216ENST00000514572 HBDP02042 147 aa1.65□□□□□ -2.15
RFC1-216ENST00000514572 TCTE3Q8IZS6 198 aa1.65□□□□□ -2.15
RFC1-216ENST00000514572 COX7B2Q8TF08 81 aa1.65□□□□□ -2.15
RFC1-216ENST00000514572 SPRR4Q96PI1 79 aa1.65□□□□□ -2.15
RFC1-216ENST00000514572 SMIM7Q9BQ49 75 aa1.65□□□□□ -2.15
RFC1-216ENST00000514572 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.15
RFC1-216ENST00000514572 LINC01549A6NIU2 74 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 H3BRM9 83 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 K7EMI3 77 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 MT-ND4LP03901 98 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 S100A12P80511 92 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 COX17Q14061 63 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 SFTA2Q6UW10 78 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 SSBP3-AS1Q7Z2R9 100 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 AMELXQ99217 191 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 CDKN2A-AS1Q9UH64 79 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 USH2AO75445 5202 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 SSPOA2VEC9 5147 aa1.64□□□□□ -2.15
RFC1-216ENST00000514572 SYNE2Q8WXH0 6885 aaKnown RBP1.64□□□□□ -2.15
RFC1-216ENST00000514572 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
RFC1-216ENST00000514572 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
RFC1-216ENST00000514572 LINC00846Q9NV44 126 aa1.63□□□□□ -2.15
RFC1-216ENST00000514572 V9GYV3 84 aa1.63□□□□□ -2.15
RFC1-216ENST00000514572 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
RFC1-216ENST00000514572 ETDCA0A1B0GVM5 59 aa1.62□□□□□ -2.15
RFC1-216ENST00000514572 SMIM27A0A1W2PRY6 76 aa1.62□□□□□ -2.15
RFC1-216ENST00000514572 IGIPA6NJ69 53 aa1.62□□□□□ -2.15
RFC1-216ENST00000514572 LIMD2Q9BT23 127 aa1.62□□□□□ -2.15
RFC1-216ENST00000514572 NXT2Q9NPJ8 142 aaKnown RBP1.62□□□□□ -2.15
RFC1-216ENST00000514572 ADIRFQ15847 76 aa1.61□□□□□ -2.15
RFC1-216ENST00000514572 C9orf153Q5TBE3 101 aa1.61□□□□□ -2.15
RFC1-216ENST00000514572 MRPL54Q6P161 138 aaKnown RBP1.61□□□□□ -2.15
RFC1-216ENST00000514572 ALKAL2Q6UX46 152 aa1.61□□□□□ -2.15
RFC1-216ENST00000514572 Q8N8P6 123 aa1.61□□□□□ -2.15
RFC1-216ENST00000514572 HSPB8Q9UJY1 196 aa1.61□□□□□ -2.15
RFC1-216ENST00000514572 ERG28Q9UKR5 140 aa1.61□□□□□ -2.15
RFC1-216ENST00000514572 C9orf92A6NGG3 77 aa1.6□□□□□ -2.15
RFC1-216ENST00000514572 DNAL4O96015 105 aa1.6□□□□□ -2.15
RFC1-216ENST00000514572 SPINK8P0C7L1 97 aa1.6□□□□□ -2.15
RFC1-216ENST00000514572 LINC00158P58513 81 aa1.6□□□□□ -2.15
RFC1-216ENST00000514572 KCNQ1DNQ9H478 68 aa1.6□□□□□ -2.15
RFC1-216ENST00000514572 LINC00587B1AMM8 73 aa1.59□□□□□ -2.15
RFC1-216ENST00000514572 SPRR1AP35321 89 aa1.59□□□□□ -2.15
RFC1-216ENST00000514572 JMJD7-PLA2G4BH0Y9G9 81 aa1.58□□□□□ -2.16
RFC1-216ENST00000514572 RPL37P61927 97 aaKnown RBP1.58□□□□□ -2.16
RFC1-216ENST00000514572 CASC2Q6XLA1 102 aa1.58□□□□□ -2.16
RFC1-216ENST00000514572 ATP11AUNQ6ZP68 121 aa1.58□□□□□ -2.16
RFC1-216ENST00000514572 Q6ZRX8 168 aa1.58□□□□□ -2.16
RFC1-216ENST00000514572 TRBV20-1A0A075B6N2 111 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 TRBV10-3A0A0K0K1G6 114 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 C20orf202A1L168 122 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 A6NN06 94 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 NCR3O14931 201 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 IGLC3P0DOY3 106 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 AKR1D1P51857 326 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 PEA15Q15121 130 aa1.57□□□□□ -2.16
RFC1-216ENST00000514572 LINC01546A6NGU7 62 aa1.56□□□□□ -2.16
RFC1-216ENST00000514572 ADCYAP1P18509 176 aa1.56□□□□□ -2.16
RFC1-216ENST00000514572 MEIG1Q5JSS6 88 aa1.56□□□□□ -2.16
RFC1-216ENST00000514572 S100A7L2Q5SY68 101 aa1.56□□□□□ -2.16
RFC1-216ENST00000514572 TMEM170BQ5T4T1 132 aa1.56□□□□□ -2.16
RFC1-216ENST00000514572 SMCO4Q9NRQ5 59 aa1.56□□□□□ -2.16
RFC1-216ENST00000514572 TRAV23DV6A0A075B6W5 121 aa1.55□□□□□ -2.16
RFC1-216ENST00000514572 LOC107984156A0A0G2JMH3 177 aa1.55□□□□□ -2.16
RFC1-216ENST00000514572 MYMXA0A1B0GTQ4 84 aa1.55□□□□□ -2.16
RFC1-216ENST00000514572 SMIM13P0DJ93 91 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms