RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 CRCT1Q9UGL9 99 aa11.73□□□□□ -0.53
CLDND1-230ENST00000514537 C8orf87E5RJ46 101 aa11.72□□□□□ -0.53
CLDND1-230ENST00000514537 Q6ZQT0 140 aa11.72□□□□□ -0.53
CLDND1-230ENST00000514537 JMJD7-PLA2G4BH0Y9G9 81 aa11.7□□□□□ -0.54
CLDND1-230ENST00000514537 J3KT08 172 aa11.69□□□□□ -0.54
CLDND1-230ENST00000514537 LOC110117498A0A087WWA1 95 aa11.66□□□□□ -0.54
CLDND1-230ENST00000514537 A0A1B0GW54 56 aa11.64□□□□□ -0.55
CLDND1-230ENST00000514537 PDE6GP18545 87 aa11.62□□□□□ -0.55
CLDND1-230ENST00000514537 TSTD3H0UI37 97 aa11.61□□□□□ -0.55
CLDND1-230ENST00000514537 HRES1P13985 223 aa11.61□□□□□ -0.55
CLDND1-230ENST00000514537 LYRM7Q5U5X0 104 aa11.61□□□□□ -0.55
CLDND1-230ENST00000514537 MPLKIPQ8TAP9 179 aa11.61□□□□□ -0.55
CLDND1-230ENST00000514537 NDUFB1O75438 58 aa11.58□□□□□ -0.56
CLDND1-230ENST00000514537 C14orf132Q9NPU4 83 aa11.58□□□□□ -0.56
CLDND1-230ENST00000514537 BATFQ16520 125 aa11.57□□□□□ -0.56
CLDND1-230ENST00000514537 RBM12B-AS1Q9P1G2 102 aa11.56□□□□□ -0.56
CLDND1-230ENST00000514537 FAM236DA0A1B0GTK5 79 aa11.55□□□□□ -0.56
CLDND1-230ENST00000514537 A8MWP4 228 aa11.55□□□□□ -0.56
CLDND1-230ENST00000514537 FAM236CP0DP71 79 aa11.55□□□□□ -0.56
CLDND1-230ENST00000514537 ZCCHC13Q8WW36 166 aaKnown RBP11.55□□□□□ -0.56
CLDND1-230ENST00000514537 Q8N9P0 234 aaPredicted RBP11.54□□□□□ -0.56
CLDND1-230ENST00000514537 KRTAP9-8Q9BYQ0 159 aa11.54□□□□□ -0.56
CLDND1-230ENST00000514537 IGKV3D-7A0A0C4DH55 119 aa11.51□□□□□ -0.57
CLDND1-230ENST00000514537 C8orf17Q9NRJ1 99 aa11.51□□□□□ -0.57
CLDND1-230ENST00000514537 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
CLDND1-230ENST00000514537 C9orf118A6NHY6 69 aa11.49□□□□□ -0.57
CLDND1-230ENST00000514537 NREPQ16612 68 aa11.47□□□□□ -0.57
CLDND1-230ENST00000514537 TAX1BP3O14907 124 aa11.45□□□□□ -0.58
CLDND1-230ENST00000514537 SPINK7P58062 85 aa11.45□□□□□ -0.58
CLDND1-230ENST00000514537 PRR15Q8IV56 129 aa11.44□□□□□ -0.58
CLDND1-230ENST00000514537 A0A1W2PPM0 123 aa11.43□□□□□ -0.58
CLDND1-230ENST00000514537 H3BT86 120 aa11.43□□□□□ -0.58
CLDND1-230ENST00000514537 Q6ZVQ6 151 aa11.42□□□□□ -0.58
CLDND1-230ENST00000514537 MTURNQ8N3F0 131 aa11.39□□□□□ -0.59
CLDND1-230ENST00000514537 MT2AP02795 61 aa11.36□□□□□ -0.59
CLDND1-230ENST00000514537 MMP24-AS1A0A0U1RRL7 71 aa11.34□□□□□ -0.59
CLDND1-230ENST00000514537 TMEM254Q8TBM7 123 aa11.33□□□□□ -0.6
CLDND1-230ENST00000514537 MRPL34Q9BQ48 92 aaKnown RBP11.32□□□□□ -0.6
CLDND1-230ENST00000514537 USH2AO75445 5202 aa11.31□□□□□ -0.6
CLDND1-230ENST00000514537 K7EQZ3 153 aa11.3□□□□□ -0.6
CLDND1-230ENST00000514537 hDV103S1A0JD37 113 aa11.27□□□□□ -0.61
CLDND1-230ENST00000514537 MT1FP04733 61 aa11.27□□□□□ -0.61
CLDND1-230ENST00000514537 WFDC13Q8IUB5 93 aa11.27□□□□□ -0.61
CLDND1-230ENST00000514537 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
CLDND1-230ENST00000514537 BPY2O14599 106 aa11.25□□□□□ -0.61
CLDND1-230ENST00000514537 SSPOA2VEC9 5147 aa11.22□□□□□ -0.61
CLDND1-230ENST00000514537 SMCPP49901 116 aaPredicted RBP11.21□□□□□ -0.61
CLDND1-230ENST00000514537 KRTAP10-10P60014 251 aa11.2□□□□□ -0.62
CLDND1-230ENST00000514537 NDUFS5O43920 106 aa11.19□□□□□ -0.62
CLDND1-230ENST00000514537 KRTAP9-3Q9BYQ3 159 aa11.18□□□□□ -0.62
CLDND1-230ENST00000514537 COL5A1-AS1Q5SY13 56 aa11.15□□□□□ -0.62
CLDND1-230ENST00000514537 Q8N9L7 120 aa11.13□□□□□ -0.63
CLDND1-230ENST00000514537 LCE2BO14633 110 aa11.12□□□□□ -0.63
CLDND1-230ENST00000514537 PRO0461Q9UI25 63 aa11.12□□□□□ -0.63
CLDND1-230ENST00000514537 Q5W150 140 aa11.1□□□□□ -0.63
CLDND1-230ENST00000514537 CASC2Q6XLA1 102 aa11.09□□□□□ -0.63
CLDND1-230ENST00000514537 K7EP34 96 aa11.07□□□□□ -0.64
CLDND1-230ENST00000514537 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
CLDND1-230ENST00000514537 IGKV2D-30A0A075B6S6 120 aa11.05□□□□□ -0.64
CLDND1-230ENST00000514537 IGKV2-30P06310 120 aa11.05□□□□□ -0.64
CLDND1-230ENST00000514537 H1FX-AS1Q4G0G2 97 aa11.05□□□□□ -0.64
CLDND1-230ENST00000514537 HCG22E2RYF7 251 aa11.04□□□□□ -0.64
CLDND1-230ENST00000514537 C7orf65Q6ZTY9 151 aa11.03□□□□□ -0.64
CLDND1-230ENST00000514537 UBL5Q9BZL1 73 aa11.03□□□□□ -0.64
CLDND1-230ENST00000514537 CXCL6P80162 114 aa10.98□□□□□ -0.65
CLDND1-230ENST00000514537 FCGBPQ9Y6R7 5405 aaPredicted RBP10.95□□□□□ -0.66
CLDND1-230ENST00000514537 KRTAP19-1Q8IUB9 90 aa10.93□□□□□ -0.66
CLDND1-230ENST00000514537 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.92□□□□□ -0.66
CLDND1-230ENST00000514537 GTF2H5Q6ZYL4 71 aa10.92□□□□□ -0.66
CLDND1-230ENST00000514537 F8W1H4 67 aa10.88□□□□□ -0.67
CLDND1-230ENST00000514537 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
CLDND1-230ENST00000514537 ETDBQ3ZM63 59 aa10.83□□□□□ -0.68
CLDND1-230ENST00000514537 PCP4L1A6NKN8 68 aa10.81□□□□□ -0.68
CLDND1-230ENST00000514537 KRTAP9-7A8MTY7 169 aa10.77□□□□□ -0.69
CLDND1-230ENST00000514537 TP53AIP1Q9HCN2 124 aa10.77□□□□□ -0.69
CLDND1-230ENST00000514537 KRTAP3-1Q9BYR8 98 aa10.75□□□□□ -0.69
CLDND1-230ENST00000514537 KRTAP19-6Q3LI70 58 aa10.74□□□□□ -0.69
CLDND1-230ENST00000514537 MACF1Q9UPN3 7388 aaKnown RBP10.69□□□□□ -0.7
CLDND1-230ENST00000514537 C1orf64Q8NEQ6 169 aa10.68□□□□□ -0.7
CLDND1-230ENST00000514537 C5orf47Q569G3 176 aa10.66□□□□□ -0.7
CLDND1-230ENST00000514537 S4R3F8 94 aa10.63□□□□□ -0.71
CLDND1-230ENST00000514537 ACYP1P07311 99 aa10.6□□□□□ -0.71
CLDND1-230ENST00000514537 SYNE2Q8WXH0 6885 aaKnown RBP10.58□□□□□ -0.72
CLDND1-230ENST00000514537 CSAG1Q6PB30 78 aa10.58□□□□□ -0.72
CLDND1-230ENST00000514537 LCA10Q71F78 164 aa10.57□□□□□ -0.72
CLDND1-230ENST00000514537 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
CLDND1-230ENST00000514537 FAM240AA0A1B0GVK7 77 aa10.54□□□□□ -0.72
CLDND1-230ENST00000514537 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
CLDND1-230ENST00000514537 FAM236AA0A1B0GUQ0 79 aa10.51□□□□□ -0.73
CLDND1-230ENST00000514537 FAM236BA0A1B0GV22 79 aa10.51□□□□□ -0.73
CLDND1-230ENST00000514537 ATP5EP2Q5VTU8 51 aa10.5□□□□□ -0.73
CLDND1-230ENST00000514537 LOC101927531A0A1B0GV80 90 aa10.47□□□□□ -0.73
CLDND1-230ENST00000514537 KRTAP3-3Q9BYR6 98 aa10.45□□□□□ -0.74
CLDND1-230ENST00000514537 HIST1H4AP62805 103 aaKnown RBP10.44□□□□□ -0.74
CLDND1-230ENST00000514537 UQCRQO14949 82 aa10.41□□□□□ -0.74
CLDND1-230ENST00000514537 SPRR2GQ9BYE4 73 aa10.39□□□□□ -0.75
CLDND1-230ENST00000514537 A0A087WVE0 104 aa10.37□□□□□ -0.75
CLDND1-230ENST00000514537 ATOX1O00244 68 aa10.35□□□□□ -0.75
CLDND1-230ENST00000514537 H0Y9P7 68 aa10.34□□□□□ -0.75
CLDND1-230ENST00000514537 MT1BP07438 61 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms