RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 A0A0U1RQV1 116 aa4.53□□□□□ -1.68
NEDD4-210ENST00000513957 A0A0G2JQZ4 141 aa4.52□□□□□ -1.69
NEDD4-210ENST00000513957 ATXN8Q156A1 80 aa4.52□□□□□ -1.69
NEDD4-210ENST00000513957 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
NEDD4-210ENST00000513957 TRBV20-1A0A075B6N2 111 aa4.51□□□□□ -1.69
NEDD4-210ENST00000513957 TRBV7-4A0A0J9YYF1 115 aa4.51□□□□□ -1.69
NEDD4-210ENST00000513957 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
NEDD4-210ENST00000513957 ANKRD29Q8N6D5 301 aa4.5□□□□□ -1.69
NEDD4-210ENST00000513957 MUC17Q685J3 4493 aa4.5□□□□□ -1.69
NEDD4-210ENST00000513957 A0A087WSZ3 146 aa4.49□□□□□ -1.69
NEDD4-210ENST00000513957 RNF213Q63HN8 5207 aa4.49□□□□□ -1.69
NEDD4-210ENST00000513957 JMJD7-PLA2G4BH0Y9G9 81 aa4.48□□□□□ -1.69
NEDD4-210ENST00000513957 RBM3P98179 157 aaKnown RBP4.48□□□□□ -1.69
NEDD4-210ENST00000513957 DSCR8Q96T75 97 aa4.48□□□□□ -1.69
NEDD4-210ENST00000513957 A0A1B0GW54 56 aa4.47□□□□□ -1.69
NEDD4-210ENST00000513957 A0A1W2PNM2 257 aa4.47□□□□□ -1.69
NEDD4-210ENST00000513957 BAALC-AS2P0C853 105 aa4.47□□□□□ -1.69
NEDD4-210ENST00000513957 BATFQ16520 125 aa4.47□□□□□ -1.69
NEDD4-210ENST00000513957 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
NEDD4-210ENST00000513957 CCKP06307 115 aa4.46□□□□□ -1.7
NEDD4-210ENST00000513957 PDE6GP18545 87 aa4.46□□□□□ -1.7
NEDD4-210ENST00000513957 MUC2Q02817 5179 aa4.46□□□□□ -1.7
NEDD4-210ENST00000513957 C9JAW5 83 aa4.45□□□□□ -1.7
NEDD4-210ENST00000513957 CXCL6P80162 114 aa4.45□□□□□ -1.7
NEDD4-210ENST00000513957 A0A1W2PPM0 123 aa4.44□□□□□ -1.7
NEDD4-210ENST00000513957 IGKV2-30P06310 120 aa4.44□□□□□ -1.7
NEDD4-210ENST00000513957 NAA38Q9BRA0 125 aaKnown RBP4.44□□□□□ -1.7
NEDD4-210ENST00000513957 LOC110117498A0A087WWA1 95 aa4.43□□□□□ -1.7
NEDD4-210ENST00000513957 H3BT86 120 aa4.43□□□□□ -1.7
NEDD4-210ENST00000513957 TAX1BP3O14907 124 aa4.43□□□□□ -1.7
NEDD4-210ENST00000513957 RPL37P61927 97 aaKnown RBP4.43□□□□□ -1.7
NEDD4-210ENST00000513957 Q96NJ1 140 aa4.43□□□□□ -1.7
NEDD4-210ENST00000513957 A0A1B0GV72 72 aa4.42□□□□□ -1.7
NEDD4-210ENST00000513957 COL5A1-AS1Q5SY13 56 aa4.41□□□□□ -1.7
NEDD4-210ENST00000513957 OBSCN-AS1Q96MR7 158 aa4.41□□□□□ -1.7
NEDD4-210ENST00000513957 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
NEDD4-210ENST00000513957 J3KT08 172 aa4.4□□□□□ -1.71
NEDD4-210ENST00000513957 C4orf26Q17RF5 130 aa4.4□□□□□ -1.71
NEDD4-210ENST00000513957 Q6ZQT0 140 aa4.4□□□□□ -1.71
NEDD4-210ENST00000513957 SIGMAR1Q99720 223 aa4.4□□□□□ -1.71
NEDD4-210ENST00000513957 VPS25Q9BRG1 176 aa4.4□□□□□ -1.71
NEDD4-210ENST00000513957 PSPHP1O15172 72 aa4.39□□□□□ -1.71
NEDD4-210ENST00000513957 NDUFS5O43920 106 aa4.39□□□□□ -1.71
NEDD4-210ENST00000513957 IGKV4-1P06312 121 aa4.39□□□□□ -1.71
NEDD4-210ENST00000513957 PCOTHQ58A44 107 aa4.39□□□□□ -1.71
NEDD4-210ENST00000513957 C20orf166-AS1Q96NR2 134 aa4.38□□□□□ -1.71
NEDD4-210ENST00000513957 SPCS1Q9Y6A9 102 aa4.38□□□□□ -1.71
NEDD4-210ENST00000513957 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
NEDD4-210ENST00000513957 LINC00313P59037 77 aa4.37□□□□□ -1.71
NEDD4-210ENST00000513957 ATP11AUNQ6ZP68 121 aa4.37□□□□□ -1.71
NEDD4-210ENST00000513957 C14orf132Q9NPU4 83 aa4.37□□□□□ -1.71
NEDD4-210ENST00000513957 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
NEDD4-210ENST00000513957 A8MUU9 505 aa4.36□□□□□ -1.71
NEDD4-210ENST00000513957 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
NEDD4-210ENST00000513957 KRTAP4-1Q9BYQ7 146 aa4.35□□□□□ -1.71
NEDD4-210ENST00000513957 A0A1B0GVX0 72 aa4.34□□□□□ -1.71
NEDD4-210ENST00000513957 NDUFB1O75438 58 aa4.34□□□□□ -1.71
NEDD4-210ENST00000513957 K7EP34 96 aa4.33□□□□□ -1.72
NEDD4-210ENST00000513957 DSCR10P59022 87 aa4.33□□□□□ -1.72
NEDD4-210ENST00000513957 GTF2H5Q6ZYL4 71 aa4.33□□□□□ -1.72
NEDD4-210ENST00000513957 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
NEDD4-210ENST00000513957 KRTAP16-1A8MUX0 517 aa4.32□□□□□ -1.72
NEDD4-210ENST00000513957 A8MWP4 228 aa4.32□□□□□ -1.72
NEDD4-210ENST00000513957 NREPQ16612 68 aa4.32□□□□□ -1.72
NEDD4-210ENST00000513957 IGHV6-1A0A0B4J1U7 121 aa4.31□□□□□ -1.72
NEDD4-210ENST00000513957 DEFB116Q30KQ4 102 aa4.31□□□□□ -1.72
NEDD4-210ENST00000513957 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
NEDD4-210ENST00000513957 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
NEDD4-210ENST00000513957 PRO0461Q9UI25 63 aa4.29□□□□□ -1.72
NEDD4-210ENST00000513957 IGKV2D-30A0A075B6S6 120 aa4.28□□□□□ -1.72
NEDD4-210ENST00000513957 F8W1H4 67 aa4.28□□□□□ -1.72
NEDD4-210ENST00000513957 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
NEDD4-210ENST00000513957 PRR15Q8IV56 129 aa4.27□□□□□ -1.73
NEDD4-210ENST00000513957 C8orf17Q9NRJ1 99 aa4.27□□□□□ -1.73
NEDD4-210ENST00000513957 IGKV3D-7A0A0C4DH55 119 aa4.26□□□□□ -1.73
NEDD4-210ENST00000513957 Q8N9P0 234 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-210ENST00000513957 BPY2O14599 106 aa4.25□□□□□ -1.73
NEDD4-210ENST00000513957 UBL5Q9BZL1 73 aa4.25□□□□□ -1.73
NEDD4-210ENST00000513957 COX6B2Q6YFQ2 88 aa4.24□□□□□ -1.73
NEDD4-210ENST00000513957 TMEM254Q8TBM7 123 aa4.23□□□□□ -1.73
NEDD4-210ENST00000513957 MMP24-AS1A0A0U1RRL7 71 aa4.22□□□□□ -1.73
NEDD4-210ENST00000513957 K7EQZ3 153 aa4.22□□□□□ -1.73
NEDD4-210ENST00000513957 ZCCHC13Q8WW36 166 aaKnown RBP4.22□□□□□ -1.73
NEDD4-210ENST00000513957 MRPL34Q9BQ48 92 aaKnown RBP4.22□□□□□ -1.73
NEDD4-210ENST00000513957 ANAPC13Q9BS18 74 aa4.22□□□□□ -1.73
NEDD4-210ENST00000513957 hDV103S1A0JD37 113 aa4.21□□□□□ -1.74
NEDD4-210ENST00000513957 MT1HP80294 61 aa4.21□□□□□ -1.74
NEDD4-210ENST00000513957 RBM12B-AS1Q9P1G2 102 aa4.21□□□□□ -1.74
NEDD4-210ENST00000513957 ETDBQ3ZM63 59 aa4.2□□□□□ -1.74
NEDD4-210ENST00000513957 LINC00846Q9NV44 126 aa4.2□□□□□ -1.74
NEDD4-210ENST00000513957 ACYP1P07311 99 aa4.18□□□□□ -1.74
NEDD4-210ENST00000513957 MP68P56378 58 aa4.18□□□□□ -1.74
NEDD4-210ENST00000513957 HRES1P13985 223 aa4.16□□□□□ -1.74
NEDD4-210ENST00000513957 CASC2Q6XLA1 102 aa4.16□□□□□ -1.74
NEDD4-210ENST00000513957 HCG22E2RYF7 251 aa4.15□□□□□ -1.75
NEDD4-210ENST00000513957 M0R2T5 61 aa4.15□□□□□ -1.75
NEDD4-210ENST00000513957 SPINK7P58062 85 aa4.15□□□□□ -1.75
NEDD4-210ENST00000513957 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
NEDD4-210ENST00000513957 FAM236DA0A1B0GTK5 79 aa4.14□□□□□ -1.75
NEDD4-210ENST00000513957 FAM236CP0DP71 79 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms