RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 ATP11AUNQ6ZP68 121 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 Q6ZQT0 140 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
RNF4-221ENST00000513643 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
RNF4-221ENST00000513643 LINC00313P59037 77 aa5.04□□□□□ -1.6
RNF4-221ENST00000513643 DEFB116Q30KQ4 102 aa5.03□□□□□ -1.6
RNF4-221ENST00000513643 PDE6GP18545 87 aa5.02□□□□□ -1.61
RNF4-221ENST00000513643 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
RNF4-221ENST00000513643 SIGMAR1Q99720 223 aa5.02□□□□□ -1.61
RNF4-221ENST00000513643 A0A1W2PPM0 123 aa5.01□□□□□ -1.61
RNF4-221ENST00000513643 BATFQ16520 125 aa5.01□□□□□ -1.61
RNF4-221ENST00000513643 A0A1B0GVX0 72 aa5□□□□□ -1.61
RNF4-221ENST00000513643 J3KT08 172 aa5□□□□□ -1.61
RNF4-221ENST00000513643 VPS25Q9BRG1 176 aa5□□□□□ -1.61
RNF4-221ENST00000513643 IGHV6-1A0A0B4J1U7 121 aa4.98□□□□□ -1.61
RNF4-221ENST00000513643 C8orf87E5RJ46 101 aa4.98□□□□□ -1.61
RNF4-221ENST00000513643 H3BT86 120 aa4.98□□□□□ -1.61
RNF4-221ENST00000513643 C14orf132Q9NPU4 83 aa4.98□□□□□ -1.61
RNF4-221ENST00000513643 MPLKIPQ8TAP9 179 aa4.97□□□□□ -1.61
RNF4-221ENST00000513643 KRTAP10-6P60371 365 aaPredicted RBP4.96□□□□□ -1.62
RNF4-221ENST00000513643 A8MWP4 228 aa4.95□□□□□ -1.62
RNF4-221ENST00000513643 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
RNF4-221ENST00000513643 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
RNF4-221ENST00000513643 COX6B2Q6YFQ2 88 aa4.93□□□□□ -1.62
RNF4-221ENST00000513643 FSIP2Q5CZC0 6907 aa4.92□□□□□ -1.62
RNF4-221ENST00000513643 HRES1P13985 223 aa4.92□□□□□ -1.62
RNF4-221ENST00000513643 COL5A1-AS1Q5SY13 56 aa4.92□□□□□ -1.62
RNF4-221ENST00000513643 MTURNQ8N3F0 131 aa4.92□□□□□ -1.62
RNF4-221ENST00000513643 PRO0461Q9UI25 63 aa4.92□□□□□ -1.62
RNF4-221ENST00000513643 SPCS1Q9Y6A9 102 aa4.92□□□□□ -1.62
RNF4-221ENST00000513643 H3BS24 57 aa4.91□□□□□ -1.62
RNF4-221ENST00000513643 NDUFB1O75438 58 aa4.91□□□□□ -1.62
RNF4-221ENST00000513643 NREPQ16612 68 aa4.91□□□□□ -1.62
RNF4-221ENST00000513643 PRR15Q8IV56 129 aa4.91□□□□□ -1.62
RNF4-221ENST00000513643 C8orf17Q9NRJ1 99 aa4.91□□□□□ -1.62
RNF4-221ENST00000513643 ZCCHC13Q8WW36 166 aaKnown RBP4.9□□□□□ -1.63
RNF4-221ENST00000513643 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
RNF4-221ENST00000513643 K7EP34 96 aa4.87□□□□□ -1.63
RNF4-221ENST00000513643 Q6ZVQ6 151 aa4.87□□□□□ -1.63
RNF4-221ENST00000513643 M0R2T5 61 aa4.86□□□□□ -1.63
RNF4-221ENST00000513643 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
RNF4-221ENST00000513643 K7EQZ3 153 aa4.85□□□□□ -1.63
RNF4-221ENST00000513643 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
RNF4-221ENST00000513643 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.63
RNF4-221ENST00000513643 SPINK7P58062 85 aa4.84□□□□□ -1.63
RNF4-221ENST00000513643 TMEM254Q8TBM7 123 aa4.84□□□□□ -1.63
RNF4-221ENST00000513643 MRPL34Q9BQ48 92 aaKnown RBP4.83□□□□□ -1.64
RNF4-221ENST00000513643 BPY2O14599 106 aa4.82□□□□□ -1.64
RNF4-221ENST00000513643 hDV103S1A0JD37 113 aa4.81□□□□□ -1.64
RNF4-221ENST00000513643 LINC00846Q9NV44 126 aa4.81□□□□□ -1.64
RNF4-221ENST00000513643 RBM12B-AS1Q9P1G2 102 aa4.81□□□□□ -1.64
RNF4-221ENST00000513643 USH2AO75445 5202 aa4.81□□□□□ -1.64
RNF4-221ENST00000513643 F8W1H4 67 aa4.79□□□□□ -1.64
RNF4-221ENST00000513643 GTF2H5Q6ZYL4 71 aa4.78□□□□□ -1.64
RNF4-221ENST00000513643 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
RNF4-221ENST00000513643 Q5W150 140 aa4.77□□□□□ -1.65
RNF4-221ENST00000513643 Q8N9L7 120 aa4.77□□□□□ -1.65
RNF4-221ENST00000513643 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
RNF4-221ENST00000513643 FAM236DA0A1B0GTK5 79 aa4.75□□□□□ -1.65
RNF4-221ENST00000513643 MT2AP02795 61 aa4.75□□□□□ -1.65
RNF4-221ENST00000513643 FAM236CP0DP71 79 aa4.75□□□□□ -1.65
RNF4-221ENST00000513643 ETDBQ3ZM63 59 aa4.75□□□□□ -1.65
RNF4-221ENST00000513643 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
RNF4-221ENST00000513643 CASC2Q6XLA1 102 aa4.74□□□□□ -1.65
RNF4-221ENST00000513643 WFDC13Q8IUB5 93 aa4.74□□□□□ -1.65
RNF4-221ENST00000513643 MT1FP04733 61 aa4.72□□□□□ -1.65
RNF4-221ENST00000513643 HCG22E2RYF7 251 aa4.7□□□□□ -1.66
RNF4-221ENST00000513643 NDUFS5O43920 106 aa4.7□□□□□ -1.66
RNF4-221ENST00000513643 CXCL6P80162 114 aa4.7□□□□□ -1.66
RNF4-221ENST00000513643 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
RNF4-221ENST00000513643 KRTAP4-8Q9BYQ9 185 aa4.69□□□□□ -1.66
RNF4-221ENST00000513643 PCP4P48539 62 aa4.67□□□□□ -1.66
RNF4-221ENST00000513643 H1FX-AS1Q4G0G2 97 aa4.67□□□□□ -1.66
RNF4-221ENST00000513643 C7orf65Q6ZTY9 151 aa4.67□□□□□ -1.66
RNF4-221ENST00000513643 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.67
RNF4-221ENST00000513643 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.67
RNF4-221ENST00000513643 IGKV2-30P06310 120 aa4.65□□□□□ -1.67
RNF4-221ENST00000513643 ACYP1P07311 99 aa4.65□□□□□ -1.67
RNF4-221ENST00000513643 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
RNF4-221ENST00000513643 KRTAP10-10P60014 251 aa4.63□□□□□ -1.67
RNF4-221ENST00000513643 KRTAP3-1Q9BYR8 98 aa4.63□□□□□ -1.67
RNF4-221ENST00000513643 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
RNF4-221ENST00000513643 FCGBPQ9Y6R7 5405 aaPredicted RBP4.63□□□□□ -1.67
RNF4-221ENST00000513643 A0A1B0GV90 55 aa4.6□□□□□ -1.67
RNF4-221ENST00000513643 C4orf26Q17RF5 130 aa4.6□□□□□ -1.67
RNF4-221ENST00000513643 ATP5EP2Q5VTU8 51 aa4.58□□□□□ -1.68
RNF4-221ENST00000513643 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
RNF4-221ENST00000513643 LINC00643Q86TS7 51 aa4.54□□□□□ -1.68
RNF4-221ENST00000513643 C1orf64Q8NEQ6 169 aa4.52□□□□□ -1.69
RNF4-221ENST00000513643 TRAV22A0A0B4J277 110 aa4.51□□□□□ -1.69
RNF4-221ENST00000513643 KRTAP19-1Q8IUB9 90 aa4.51□□□□□ -1.69
RNF4-221ENST00000513643 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
RNF4-221ENST00000513643 UQCRQO14949 82 aa4.5□□□□□ -1.69
RNF4-221ENST00000513643 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
RNF4-221ENST00000513643 A0A087WVE0 104 aa4.48□□□□□ -1.69
RNF4-221ENST00000513643 KRTAP19-6Q3LI70 58 aa4.48□□□□□ -1.69
RNF4-221ENST00000513643 LCA10Q71F78 164 aa4.48□□□□□ -1.69
RNF4-221ENST00000513643 S4R3F8 94 aa4.47□□□□□ -1.69
RNF4-221ENST00000513643 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
RNF4-221ENST00000513643 C5orf47Q569G3 176 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms