RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 KRTAP13-1Q8IUC0 172 aa9.95□□□□□ -0.82
HMGCL-209ENST00000513148 SPRR1AP35321 89 aa9.94□□□□□ -0.82
HMGCL-209ENST00000513148 FAT3Q8TDW7 4589 aa9.91□□□□□ -0.82
HMGCL-209ENST00000513148 KRTAP29-1A8MX34 341 aaPredicted RBP9.91□□□□□ -0.82
HMGCL-209ENST00000513148 KRTAP4-16G5E9R7 235 aaPredicted RBP9.91□□□□□ -0.82
HMGCL-209ENST00000513148 J3QL48 77 aa9.91□□□□□ -0.82
HMGCL-209ENST00000513148 SPRR4Q96PI1 79 aa9.89□□□□□ -0.83
HMGCL-209ENST00000513148 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
HMGCL-209ENST00000513148 PSPHP1O15172 72 aa9.87□□□□□ -0.83
HMGCL-209ENST00000513148 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
HMGCL-209ENST00000513148 Q6ZRX8 168 aa9.87□□□□□ -0.83
HMGCL-209ENST00000513148 Q8N377 158 aa9.87□□□□□ -0.83
HMGCL-209ENST00000513148 SPANXA2-OT1Q8N9U9 137 aa9.87□□□□□ -0.83
HMGCL-209ENST00000513148 H3BPC8 53 aa9.85□□□□□ -0.83
HMGCL-209ENST00000513148 Q8NBF4 154 aa9.85□□□□□ -0.83
HMGCL-209ENST00000513148 DHRS4-AS1Q9P1J3 65 aa9.85□□□□□ -0.83
HMGCL-209ENST00000513148 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
HMGCL-209ENST00000513148 Q9BRP9 147 aa9.84□□□□□ -0.83
HMGCL-209ENST00000513148 ANAPC11Q9NYG5 84 aa9.84□□□□□ -0.83
HMGCL-209ENST00000513148 A0A1W2PNM2 257 aa9.83□□□□□ -0.84
HMGCL-209ENST00000513148 DSCR10P59022 87 aa9.83□□□□□ -0.84
HMGCL-209ENST00000513148 Q5VV11 94 aa9.83□□□□□ -0.84
HMGCL-209ENST00000513148 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
HMGCL-209ENST00000513148 PRR26Q8N8Z3 221 aa9.83□□□□□ -0.84
HMGCL-209ENST00000513148 KTN1-AS1Q86SY8 53 aa9.82□□□□□ -0.84
HMGCL-209ENST00000513148 A8MUN3 132 aa9.82□□□□□ -0.84
HMGCL-209ENST00000513148 HCG22E2RYF7 251 aa9.81□□□□□ -0.84
HMGCL-209ENST00000513148 C4orf48Q5BLP8 95 aa9.8□□□□□ -0.84
HMGCL-209ENST00000513148 MP68P56378 58 aa9.8□□□□□ -0.84
HMGCL-209ENST00000513148 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
HMGCL-209ENST00000513148 NDUFS5O43920 106 aa9.79□□□□□ -0.84
HMGCL-209ENST00000513148 A0A087X002 238 aa9.78□□□□□ -0.84
HMGCL-209ENST00000513148 Q8N9P0 234 aaPredicted RBP9.77□□□□□ -0.85
HMGCL-209ENST00000513148 ZNF706Q9Y5V0 76 aaPredicted RBP9.77□□□□□ -0.85
HMGCL-209ENST00000513148 KRTAP10-8P60410 259 aa9.77□□□□□ -0.85
HMGCL-209ENST00000513148 K7EQZ3 153 aa9.76□□□□□ -0.85
HMGCL-209ENST00000513148 TNXBP22105 4242 aa9.75□□□□□ -0.85
HMGCL-209ENST00000513148 ST20-AS1Q8NBB2 130 aa9.75□□□□□ -0.85
HMGCL-209ENST00000513148 LOC101927531A0A1B0GV80 90 aa9.74□□□□□ -0.85
HMGCL-209ENST00000513148 Q75L30 129 aa9.74□□□□□ -0.85
HMGCL-209ENST00000513148 DEFB105AQ8NG35 78 aa9.73□□□□□ -0.85
HMGCL-209ENST00000513148 LINC00208Q96KT6 92 aa9.73□□□□□ -0.85
HMGCL-209ENST00000513148 HERC1Q15751 4861 aa9.73□□□□□ -0.85
HMGCL-209ENST00000513148 CHKB-CPT1BH3BT56 60 aa9.72□□□□□ -0.85
HMGCL-209ENST00000513148 KRTAP13-2Q52LG2 175 aa9.72□□□□□ -0.85
HMGCL-209ENST00000513148 RBM12B-AS1Q9P1G2 102 aa9.72□□□□□ -0.85
HMGCL-209ENST00000513148 TYMSOSQ8TAI1 123 aa9.7□□□□□ -0.86
HMGCL-209ENST00000513148 LINC00483Q53H64 154 aa9.68□□□□□ -0.86
HMGCL-209ENST00000513148 IGLV9-49A0A0B4J1Y8 123 aa9.66□□□□□ -0.86
HMGCL-209ENST00000513148 A6NN06 94 aa9.66□□□□□ -0.86
HMGCL-209ENST00000513148 PRR4Q16378 134 aa9.66□□□□□ -0.86
HMGCL-209ENST00000513148 CDC42SE1Q9NRR8 79 aa9.64□□□□□ -0.87
HMGCL-209ENST00000513148 LCA10Q71F78 164 aa9.63□□□□□ -0.87
HMGCL-209ENST00000513148 PRR15LQ9BU68 103 aa9.63□□□□□ -0.87
HMGCL-209ENST00000513148 IGLV8-61A0A075B6I0 122 aa9.62□□□□□ -0.87
HMGCL-209ENST00000513148 MOBPQ13875 183 aa9.62□□□□□ -0.87
HMGCL-209ENST00000513148 A8MU10 97 aa9.61□□□□□ -0.87
HMGCL-209ENST00000513148 SPTSSBQ8NFR3 76 aa9.61□□□□□ -0.87
HMGCL-209ENST00000513148 IGLV7-46A0A075B6I9 117 aa9.6□□□□□ -0.87
HMGCL-209ENST00000513148 H0Y9P7 68 aa9.6□□□□□ -0.87
HMGCL-209ENST00000513148 SPRR1BP22528 89 aa9.6□□□□□ -0.87
HMGCL-209ENST00000513148 LINC00304Q8N9R0 145 aa9.59□□□□□ -0.87
HMGCL-209ENST00000513148 A6NED7 52 aa9.58□□□□□ -0.88
HMGCL-209ENST00000513148 C7orf65Q6ZTY9 151 aa9.57□□□□□ -0.88
HMGCL-209ENST00000513148 LINC01558Q9Y6Z2 57 aa9.56□□□□□ -0.88
HMGCL-209ENST00000513148 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
HMGCL-209ENST00000513148 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
HMGCL-209ENST00000513148 COA5Q86WW8 74 aa9.54□□□□□ -0.88
HMGCL-209ENST00000513148 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
HMGCL-209ENST00000513148 SSBP3-AS1Q7Z2R9 100 aa9.52□□□□□ -0.89
HMGCL-209ENST00000513148 A8MWP4 228 aa9.49□□□□□ -0.89
HMGCL-209ENST00000513148 SPAG11AQ6PDA7 123 aa9.48□□□□□ -0.89
HMGCL-209ENST00000513148 A0A087WSZ3 146 aa9.47□□□□□ -0.89
HMGCL-209ENST00000513148 A0A0G2JQZ4 141 aa9.46□□□□□ -0.9
HMGCL-209ENST00000513148 DEFB116Q30KQ4 102 aa9.46□□□□□ -0.9
HMGCL-209ENST00000513148 HMCN2Q8NDA2 5059 aa9.45□□□□□ -0.9
HMGCL-209ENST00000513148 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
HMGCL-209ENST00000513148 TP53AIP1Q9HCN2 124 aa9.45□□□□□ -0.9
HMGCL-209ENST00000513148 SPINK1P00995 79 aa9.44□□□□□ -0.9
HMGCL-209ENST00000513148 LINC00472Q9H8W2 130 aa9.44□□□□□ -0.9
HMGCL-209ENST00000513148 ASB16-AS1Q495Z4 193 aa9.4□□□□□ -0.9
HMGCL-209ENST00000513148 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
HMGCL-209ENST00000513148 C8orf87E5RJ46 101 aa9.36□□□□□ -0.91
HMGCL-209ENST00000513148 RPS29P62273 56 aaKnown RBP9.36□□□□□ -0.91
HMGCL-209ENST00000513148 LPAP08519 4548 aa9.3□□□□□ -0.92
HMGCL-209ENST00000513148 SPINK7P58062 85 aa9.29□□□□□ -0.92
HMGCL-209ENST00000513148 HRES1P13985 223 aa9.27□□□□□ -0.92
HMGCL-209ENST00000513148 LRP2P98164 4655 aa9.27□□□□□ -0.93
HMGCL-209ENST00000513148 PCOTHQ58A44 107 aa9.24□□□□□ -0.93
HMGCL-209ENST00000513148 LINC00313P59037 77 aa9.22□□□□□ -0.93
HMGCL-209ENST00000513148 UBR4Q5T4S7 5183 aa9.19□□□□□ -0.94
HMGCL-209ENST00000513148 C8orf17Q9NRJ1 99 aa9.19□□□□□ -0.94
HMGCL-209ENST00000513148 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
HMGCL-209ENST00000513148 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
HMGCL-209ENST00000513148 Q96NJ1 140 aa9.17□□□□□ -0.94
HMGCL-209ENST00000513148 KRTAP13-3Q3SY46 172 aa9.14□□□□□ -0.95
HMGCL-209ENST00000513148 ACYP2P14621 99 aa9.12□□□□□ -0.95
HMGCL-209ENST00000513148 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
HMGCL-209ENST00000513148 SPATA8Q6RVD6 105 aa9.12□□□□□ -0.95
HMGCL-209ENST00000513148 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms