RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 IGKV4-1P06312 121 aa5.84□□□□□ -1.47
MSH3-203ENST00000512531 NDUFB1O75438 58 aa5.83□□□□□ -1.48
MSH3-203ENST00000512531 SMR3BP02814 79 aaPredicted RBP5.83□□□□□ -1.48
MSH3-203ENST00000512531 DNAH8Q96JB1 4490 aa5.82□□□□□ -1.48
MSH3-203ENST00000512531 A0A087WSZ3 146 aa5.82□□□□□ -1.48
MSH3-203ENST00000512531 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
MSH3-203ENST00000512531 C20orf197Q8N268 126 aa5.82□□□□□ -1.48
MSH3-203ENST00000512531 ZNF861PO60384 105 aa5.81□□□□□ -1.48
MSH3-203ENST00000512531 KRTAP13-1Q8IUC0 172 aa5.81□□□□□ -1.48
MSH3-203ENST00000512531 KRTAP4-7Q9BYR0 210 aa5.81□□□□□ -1.48
MSH3-203ENST00000512531 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
MSH3-203ENST00000512531 KLKP1Q107X0 134 aa5.8□□□□□ -1.48
MSH3-203ENST00000512531 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
MSH3-203ENST00000512531 Q6ZSA8 131 aa5.8□□□□□ -1.48
MSH3-203ENST00000512531 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
MSH3-203ENST00000512531 PSORS1C2Q9UIG4 136 aa5.78□□□□□ -1.48
MSH3-203ENST00000512531 HMCN2Q8NDA2 5059 aa5.77□□□□□ -1.49
MSH3-203ENST00000512531 OXTP01178 125 aa5.77□□□□□ -1.49
MSH3-203ENST00000512531 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
MSH3-203ENST00000512531 IGLV9-49A0A0B4J1Y8 123 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 FAM236DA0A1B0GTK5 79 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 A8MWP4 228 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 FAM236CP0DP71 79 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 MP68P56378 58 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 DSCR10P59022 87 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 Q8N9L7 120 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
MSH3-203ENST00000512531 PANO1I0J062 215 aa5.75□□□□□ -1.49
MSH3-203ENST00000512531 IGLV7-43P04211 117 aa5.75□□□□□ -1.49
MSH3-203ENST00000512531 LCE1DQ5T752 114 aa5.75□□□□□ -1.49
MSH3-203ENST00000512531 KRTAP11-1Q8IUC1 163 aa5.75□□□□□ -1.49
MSH3-203ENST00000512531 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
MSH3-203ENST00000512531 K7EQZ3 153 aa5.74□□□□□ -1.49
MSH3-203ENST00000512531 H3BPC8 53 aa5.73□□□□□ -1.49
MSH3-203ENST00000512531 CD164Q04900 197 aa5.73□□□□□ -1.49
MSH3-203ENST00000512531 PRR15Q8IV56 129 aa5.73□□□□□ -1.49
MSH3-203ENST00000512531 KRTAP10-4P60372 401 aaPredicted RBP5.72□□□□□ -1.49
MSH3-203ENST00000512531 CASC2Q6XLA1 102 aa5.72□□□□□ -1.49
MSH3-203ENST00000512531 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
MSH3-203ENST00000512531 MOBPQ13875 183 aa5.71□□□□□ -1.5
MSH3-203ENST00000512531 LINC00472Q9H8W2 130 aa5.71□□□□□ -1.5
MSH3-203ENST00000512531 SNURFQ9Y675 71 aa5.71□□□□□ -1.5
MSH3-203ENST00000512531 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
MSH3-203ENST00000512531 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
MSH3-203ENST00000512531 H7BZZ5 65 aa5.7□□□□□ -1.5
MSH3-203ENST00000512531 TP53AIP1Q9HCN2 124 aa5.7□□□□□ -1.5
MSH3-203ENST00000512531 SERP1Q9Y6X1 66 aa5.7□□□□□ -1.5
MSH3-203ENST00000512531 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
MSH3-203ENST00000512531 A0A0U1RQV1 116 aa5.68□□□□□ -1.5
MSH3-203ENST00000512531 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
MSH3-203ENST00000512531 CIRBP-AS1Q8TBR5 109 aa5.68□□□□□ -1.5
MSH3-203ENST00000512531 PKHD1L1Q86WI1 4243 aa5.68□□□□□ -1.5
MSH3-203ENST00000512531 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
MSH3-203ENST00000512531 FAM229BQ4G0N7 80 aa5.67□□□□□ -1.5
MSH3-203ENST00000512531 A0A0G2JQZ4 141 aa5.66□□□□□ -1.5
MSH3-203ENST00000512531 hDV103S1A0JD37 113 aa5.66□□□□□ -1.5
MSH3-203ENST00000512531 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
MSH3-203ENST00000512531 LIMD2Q9BT23 127 aa5.65□□□□□ -1.5
MSH3-203ENST00000512531 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
MSH3-203ENST00000512531 HRCT1Q6UXD1 115 aa5.64□□□□□ -1.51
MSH3-203ENST00000512531 C8orf87E5RJ46 101 aa5.63□□□□□ -1.51
MSH3-203ENST00000512531 ASB16-AS1Q495Z4 193 aa5.63□□□□□ -1.51
MSH3-203ENST00000512531 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
MSH3-203ENST00000512531 H0Y9P7 68 aa5.62□□□□□ -1.51
MSH3-203ENST00000512531 KRTAP4-9Q9BYQ8 210 aa5.62□□□□□ -1.51
MSH3-203ENST00000512531 C8orf17Q9NRJ1 99 aa5.61□□□□□ -1.51
MSH3-203ENST00000512531 SMIM26A0A096LP01 95 aa5.6□□□□□ -1.51
MSH3-203ENST00000512531 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
MSH3-203ENST00000512531 TRAV22A0A0B4J277 110 aa5.6□□□□□ -1.51
MSH3-203ENST00000512531 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
MSH3-203ENST00000512531 MMP24-AS1A0A0U1RRL7 71 aa5.59□□□□□ -1.51
MSH3-203ENST00000512531 NDUFS5O43920 106 aa5.59□□□□□ -1.51
MSH3-203ENST00000512531 MRPL34Q9BQ48 92 aaKnown RBP5.59□□□□□ -1.51
MSH3-203ENST00000512531 Q5XG85 94 aa5.58□□□□□ -1.52
MSH3-203ENST00000512531 LINC00208Q96KT6 92 aa5.58□□□□□ -1.52
MSH3-203ENST00000512531 Q96NJ1 140 aa5.58□□□□□ -1.52
MSH3-203ENST00000512531 SPINK6Q6UWN8 80 aa5.57□□□□□ -1.52
MSH3-203ENST00000512531 SPANXA2-OT1Q8N9U9 137 aa5.57□□□□□ -1.52
MSH3-203ENST00000512531 ZCCHC13Q8WW36 166 aaKnown RBP5.57□□□□□ -1.52
MSH3-203ENST00000512531 TNXBP22105 4242 aa5.56□□□□□ -1.52
MSH3-203ENST00000512531 C1orf64Q8NEQ6 169 aa5.56□□□□□ -1.52
MSH3-203ENST00000512531 KRTAP4-2Q9BYR5 136 aa5.56□□□□□ -1.52
MSH3-203ENST00000512531 ANAPC11Q9NYG5 84 aa5.56□□□□□ -1.52
MSH3-203ENST00000512531 SPAG11AQ6PDA7 123 aa5.55□□□□□ -1.52
MSH3-203ENST00000512531 LRP2P98164 4655 aa5.55□□□□□ -1.52
MSH3-203ENST00000512531 SPINK1P00995 79 aa5.54□□□□□ -1.52
MSH3-203ENST00000512531 TYMSOSQ8TAI1 123 aa5.54□□□□□ -1.52
MSH3-203ENST00000512531 CYP4F30PQ9H0H9 118 aa5.54□□□□□ -1.52
MSH3-203ENST00000512531 LINC00313P59037 77 aa5.52□□□□□ -1.53
MSH3-203ENST00000512531 RPS29P62273 56 aaKnown RBP5.52□□□□□ -1.53
MSH3-203ENST00000512531 V9GYY9 64 aa5.52□□□□□ -1.53
MSH3-203ENST00000512531 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
MSH3-203ENST00000512531 LOC101927531A0A1B0GV80 90 aa5.51□□□□□ -1.53
MSH3-203ENST00000512531 A0A087X002 238 aa5.47□□□□□ -1.53
MSH3-203ENST00000512531 KRTAP13-2Q52LG2 175 aa5.46□□□□□ -1.54
MSH3-203ENST00000512531 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.54
MSH3-203ENST00000512531 IGLV7-46A0A075B6I9 117 aa5.45□□□□□ -1.54
MSH3-203ENST00000512531 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
MSH3-203ENST00000512531 KRTAP10-8P60410 259 aa5.45□□□□□ -1.54
MSH3-203ENST00000512531 C1orf195Q5TG92 126 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms