RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
CCHCR1-229ENST00000512418 RBM3P98179 157 aaKnown RBP7.26□□□□□ -1.25
CCHCR1-229ENST00000512418 PYY3Q5JQD4 70 aa7.26□□□□□ -1.25
CCHCR1-229ENST00000512418 DSCR8Q96T75 97 aa7.26□□□□□ -1.25
CCHCR1-229ENST00000512418 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
CCHCR1-229ENST00000512418 MTURNQ8N3F0 131 aa7.25□□□□□ -1.25
CCHCR1-229ENST00000512418 FCGBPQ9Y6R7 5405 aaPredicted RBP7.24□□□□□ -1.25
CCHCR1-229ENST00000512418 LCE2BO14633 110 aa7.24□□□□□ -1.25
CCHCR1-229ENST00000512418 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
CCHCR1-229ENST00000512418 J3KT08 172 aa7.23□□□□□ -1.25
CCHCR1-229ENST00000512418 C21orf62-AS1Q17RA5 79 aa7.23□□□□□ -1.25
CCHCR1-229ENST00000512418 ZCCHC13Q8WW36 166 aaKnown RBP7.23□□□□□ -1.25
CCHCR1-229ENST00000512418 SCGB1C2P0DMR2 95 aa7.22□□□□□ -1.25
CCHCR1-229ENST00000512418 UQCR10Q9UDW1 63 aa7.21□□□□□ -1.26
CCHCR1-229ENST00000512418 C9JAW5 83 aa7.2□□□□□ -1.26
CCHCR1-229ENST00000512418 SPINK7P58062 85 aa7.2□□□□□ -1.26
CCHCR1-229ENST00000512418 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
CCHCR1-229ENST00000512418 Q6ZQT0 140 aa7.18□□□□□ -1.26
CCHCR1-229ENST00000512418 NDUFB1O75438 58 aa7.17□□□□□ -1.26
CCHCR1-229ENST00000512418 BAALC-AS2P0C853 105 aa7.17□□□□□ -1.26
CCHCR1-229ENST00000512418 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
CCHCR1-229ENST00000512418 A8MWP4 228 aa7.12□□□□□ -1.27
CCHCR1-229ENST00000512418 WFDC13Q8IUB5 93 aa7.12□□□□□ -1.27
CCHCR1-229ENST00000512418 C8orf17Q9NRJ1 99 aa7.12□□□□□ -1.27
CCHCR1-229ENST00000512418 A0A1B0GW54 56 aa7.11□□□□□ -1.27
CCHCR1-229ENST00000512418 JMJD7-PLA2G4BH0Y9G9 81 aa7.11□□□□□ -1.27
CCHCR1-229ENST00000512418 LYRM7Q5U5X0 104 aa7.11□□□□□ -1.27
CCHCR1-229ENST00000512418 LOC110117498A0A087WWA1 95 aa7.09□□□□□ -1.27
CCHCR1-229ENST00000512418 IGKV3D-7A0A0C4DH55 119 aa7.08□□□□□ -1.28
CCHCR1-229ENST00000512418 ATXN8Q156A1 80 aa7.08□□□□□ -1.28
CCHCR1-229ENST00000512418 PDE6GP18545 87 aa7.07□□□□□ -1.28
CCHCR1-229ENST00000512418 Q6ZVQ6 151 aa7.07□□□□□ -1.28
CCHCR1-229ENST00000512418 LINC00846Q9NV44 126 aa7.07□□□□□ -1.28
CCHCR1-229ENST00000512418 MACF1Q9UPN3 7388 aaKnown RBP7.06□□□□□ -1.28
CCHCR1-229ENST00000512418 M0R143 59 aa7.04□□□□□ -1.28
CCHCR1-229ENST00000512418 PRR15Q8IV56 129 aa7.04□□□□□ -1.28
CCHCR1-229ENST00000512418 TMA7Q9Y2S6 64 aaKnown RBP7.04□□□□□ -1.28
CCHCR1-229ENST00000512418 KRTAP19-6Q3LI70 58 aa7.03□□□□□ -1.28
CCHCR1-229ENST00000512418 NAA38Q9BRA0 125 aaKnown RBP7.03□□□□□ -1.28
CCHCR1-229ENST00000512418 C14orf132Q9NPU4 83 aa7.02□□□□□ -1.29
CCHCR1-229ENST00000512418 NREPQ16612 68 aa7.01□□□□□ -1.29
CCHCR1-229ENST00000512418 TMEM254Q8TBM7 123 aa7□□□□□ -1.29
CCHCR1-229ENST00000512418 MRPL34Q9BQ48 92 aaKnown RBP7□□□□□ -1.29
CCHCR1-229ENST00000512418 SYNE2Q8WXH0 6885 aaKnown RBP7□□□□□ -1.29
CCHCR1-229ENST00000512418 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
CCHCR1-229ENST00000512418 H1FX-AS1Q4G0G2 97 aa6.96□□□□□ -1.3
CCHCR1-229ENST00000512418 hDV103S1A0JD37 113 aa6.95□□□□□ -1.3
CCHCR1-229ENST00000512418 K7EQZ3 153 aa6.94□□□□□ -1.3
CCHCR1-229ENST00000512418 NDUFS5O43920 106 aa6.94□□□□□ -1.3
CCHCR1-229ENST00000512418 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
CCHCR1-229ENST00000512418 IGKV2-30P06310 120 aa6.89□□□□□ -1.31
CCHCR1-229ENST00000512418 C7orf65Q6ZTY9 151 aa6.89□□□□□ -1.31
CCHCR1-229ENST00000512418 BPY2O14599 106 aa6.87□□□□□ -1.31
CCHCR1-229ENST00000512418 H3BT86 120 aa6.86□□□□□ -1.31
CCHCR1-229ENST00000512418 Q5W150 140 aa6.85□□□□□ -1.31
CCHCR1-229ENST00000512418 SMIM6P0DI80 62 aa6.84□□□□□ -1.31
CCHCR1-229ENST00000512418 BATFQ16520 125 aa6.83□□□□□ -1.32
CCHCR1-229ENST00000512418 CASC2Q6XLA1 102 aa6.81□□□□□ -1.32
CCHCR1-229ENST00000512418 KRTAP6-3Q3LI67 103 aa6.8□□□□□ -1.32
CCHCR1-229ENST00000512418 C9orf118A6NHY6 69 aa6.79□□□□□ -1.32
CCHCR1-229ENST00000512418 HCG22E2RYF7 251 aa6.79□□□□□ -1.32
CCHCR1-229ENST00000512418 TSTD3H0UI37 97 aa6.79□□□□□ -1.32
CCHCR1-229ENST00000512418 C4orf26Q17RF5 130 aa6.79□□□□□ -1.32
CCHCR1-229ENST00000512418 Q8N9L7 120 aa6.79□□□□□ -1.32
CCHCR1-229ENST00000512418 A0A1W2PPM0 123 aa6.77□□□□□ -1.33
CCHCR1-229ENST00000512418 CXCL6P80162 114 aa6.76□□□□□ -1.33
CCHCR1-229ENST00000512418 TAX1BP3O14907 124 aa6.74□□□□□ -1.33
CCHCR1-229ENST00000512418 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
CCHCR1-229ENST00000512418 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
CCHCR1-229ENST00000512418 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
CCHCR1-229ENST00000512418 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
CCHCR1-229ENST00000512418 UBL5Q9BZL1 73 aa6.67□□□□□ -1.34
CCHCR1-229ENST00000512418 S4R3F8 94 aa6.67□□□□□ -1.34
CCHCR1-229ENST00000512418 SPCS1Q9Y6A9 102 aa6.66□□□□□ -1.34
CCHCR1-229ENST00000512418 A6NN06 94 aa6.65□□□□□ -1.34
CCHCR1-229ENST00000512418 CSAG1Q6PB30 78 aa6.65□□□□□ -1.34
CCHCR1-229ENST00000512418 MT1BP07438 61 aa6.64□□□□□ -1.35
CCHCR1-229ENST00000512418 SMCPP49901 116 aaPredicted RBP6.64□□□□□ -1.35
CCHCR1-229ENST00000512418 Q5VV11 94 aa6.64□□□□□ -1.35
CCHCR1-229ENST00000512418 C1orf64Q8NEQ6 169 aa6.64□□□□□ -1.35
CCHCR1-229ENST00000512418 LOC105371267A0A1B0GV96 52 aa6.63□□□□□ -1.35
CCHCR1-229ENST00000512418 SPRR2GQ9BYE4 73 aa6.63□□□□□ -1.35
CCHCR1-229ENST00000512418 LCA10Q71F78 164 aa6.62□□□□□ -1.35
CCHCR1-229ENST00000512418 KRTAP19-8Q3LI54 63 aa6.61□□□□□ -1.35
CCHCR1-229ENST00000512418 MUC12Q9UKN1 5478 aa6.59□□□□□ -1.36
CCHCR1-229ENST00000512418 NEBP20929 6669 aa6.58□□□□□ -1.36
CCHCR1-229ENST00000512418 TP53AIP1Q9HCN2 124 aa6.58□□□□□ -1.36
CCHCR1-229ENST00000512418 PRO0461Q9UI25 63 aa6.56□□□□□ -1.36
CCHCR1-229ENST00000512418 KLKP1Q107X0 134 aa6.55□□□□□ -1.36
CCHCR1-229ENST00000512418 KRTAP10-5P60370 271 aa6.53□□□□□ -1.36
CCHCR1-229ENST00000512418 K7EP34 96 aa6.51□□□□□ -1.37
CCHCR1-229ENST00000512418 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
CCHCR1-229ENST00000512418 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
CCHCR1-229ENST00000512418 CYP4F30PQ9H0H9 118 aa6.47□□□□□ -1.37
CCHCR1-229ENST00000512418 CRIPTQ9P021 101 aa6.46□□□□□ -1.38
CCHCR1-229ENST00000512418 TRAV22A0A0B4J277 110 aa6.43□□□□□ -1.38
CCHCR1-229ENST00000512418 KRTAP5-9P26371 169 aa6.43□□□□□ -1.38
CCHCR1-229ENST00000512418 A0A087WVE0 104 aa6.41□□□□□ -1.38
CCHCR1-229ENST00000512418 LOC101927531A0A1B0GV80 90 aa6.41□□□□□ -1.38
CCHCR1-229ENST00000512418 GTF2H5Q6ZYL4 71 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms