RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 V9GYY9 64 aa12.07□□□□□ -0.48
SPOCK3-219ENST00000511905 DNHD1Q96M86 4753 aa12.07□□□□□ -0.48
SPOCK3-219ENST00000511905 KRTAP10-1P60331 282 aa12.06□□□□□ -0.48
SPOCK3-219ENST00000511905 LINC00336Q6ZUF6 198 aa12.06□□□□□ -0.48
SPOCK3-219ENST00000511905 NDUFS5O43920 106 aa12.03□□□□□ -0.48
SPOCK3-219ENST00000511905 PRO0628Q9UI54 55 aa12.03□□□□□ -0.48
SPOCK3-219ENST00000511905 DNAH11Q96DT5 4516 aa12.03□□□□□ -0.48
SPOCK3-219ENST00000511905 A0A087X002 238 aa12.03□□□□□ -0.48
SPOCK3-219ENST00000511905 NOTCH2NLQ7Z3S9 236 aa12.03□□□□□ -0.48
SPOCK3-219ENST00000511905 DNAH5Q8TE73 4624 aa12.02□□□□□ -0.49
SPOCK3-219ENST00000511905 TGP01266 2768 aa12.01□□□□□ -0.49
SPOCK3-219ENST00000511905 C1orf195Q5TG92 126 aa12□□□□□ -0.49
SPOCK3-219ENST00000511905 LOC101927531A0A1B0GV80 90 aa11.99□□□□□ -0.49
SPOCK3-219ENST00000511905 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
SPOCK3-219ENST00000511905 SPINK6Q6UWN8 80 aa11.98□□□□□ -0.49
SPOCK3-219ENST00000511905 FRAS1Q86XX4 4008 aa11.97□□□□□ -0.49
SPOCK3-219ENST00000511905 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.49
SPOCK3-219ENST00000511905 KRTAP1-4P0C5Y4 121 aa11.92□□□□□ -0.5
SPOCK3-219ENST00000511905 LIMD2Q9BT23 127 aa11.92□□□□□ -0.5
SPOCK3-219ENST00000511905 PCOTHQ58A44 107 aa11.91□□□□□ -0.5
SPOCK3-219ENST00000511905 LINC00313P59037 77 aa11.9□□□□□ -0.5
SPOCK3-219ENST00000511905 COA5Q86WW8 74 aa11.9□□□□□ -0.5
SPOCK3-219ENST00000511905 Q8N9P0 234 aaPredicted RBP11.89□□□□□ -0.51
SPOCK3-219ENST00000511905 PKD1P98161 4303 aa11.88□□□□□ -0.51
SPOCK3-219ENST00000511905 Q5W150 140 aa11.86□□□□□ -0.51
SPOCK3-219ENST00000511905 FAM229AH3BQW9 127 aa11.84□□□□□ -0.51
SPOCK3-219ENST00000511905 BRK1Q8WUW1 75 aa11.84□□□□□ -0.51
SPOCK3-219ENST00000511905 FAT2Q9NYQ8 4349 aa11.83□□□□□ -0.52
SPOCK3-219ENST00000511905 LRP1BQ9NZR2 4599 aa11.8□□□□□ -0.52
SPOCK3-219ENST00000511905 SPINK1P00995 79 aa11.79□□□□□ -0.52
SPOCK3-219ENST00000511905 RPS29P62273 56 aaKnown RBP11.77□□□□□ -0.52
SPOCK3-219ENST00000511905 C4orf48Q5BLP8 95 aa11.77□□□□□ -0.52
SPOCK3-219ENST00000511905 KRTAP16-1A8MUX0 517 aa11.77□□□□□ -0.53
SPOCK3-219ENST00000511905 PSPHP1O15172 72 aa11.77□□□□□ -0.53
SPOCK3-219ENST00000511905 PLA2G1BP04054 148 aaKnown RBP11.77□□□□□ -0.53
SPOCK3-219ENST00000511905 A8MUN3 132 aa11.75□□□□□ -0.53
SPOCK3-219ENST00000511905 TYMSOSQ8TAI1 123 aa11.75□□□□□ -0.53
SPOCK3-219ENST00000511905 HRES1P13985 223 aa11.74□□□□□ -0.53
SPOCK3-219ENST00000511905 Q5VV11 94 aa11.74□□□□□ -0.53
SPOCK3-219ENST00000511905 LINC01558Q9Y6Z2 57 aa11.71□□□□□ -0.54
SPOCK3-219ENST00000511905 IGKV2-30P06310 120 aa11.7□□□□□ -0.54
SPOCK3-219ENST00000511905 SPAG11AQ6PDA7 123 aa11.7□□□□□ -0.54
SPOCK3-219ENST00000511905 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
SPOCK3-219ENST00000511905 ACYP2P14621 99 aa11.68□□□□□ -0.54
SPOCK3-219ENST00000511905 Q75L30 129 aa11.67□□□□□ -0.54
SPOCK3-219ENST00000511905 DMAC1Q96GE9 116 aa11.66□□□□□ -0.54
SPOCK3-219ENST00000511905 PRR15LQ9BU68 103 aa11.65□□□□□ -0.54
SPOCK3-219ENST00000511905 LINC00304Q8N9R0 145 aa11.61□□□□□ -0.55
SPOCK3-219ENST00000511905 A0A1B0GVY2 172 aa11.6□□□□□ -0.55
SPOCK3-219ENST00000511905 CHKB-CPT1BH3BT56 60 aa11.59□□□□□ -0.55
SPOCK3-219ENST00000511905 VPS13BQ7Z7G8 4022 aa11.59□□□□□ -0.55
SPOCK3-219ENST00000511905 PRR26Q8N8Z3 221 aa11.57□□□□□ -0.56
SPOCK3-219ENST00000511905 SACSQ9NZJ4 4579 aa11.56□□□□□ -0.56
SPOCK3-219ENST00000511905 KRTAP10-4P60372 401 aaPredicted RBP11.49□□□□□ -0.57
SPOCK3-219ENST00000511905 RETNLBQ9BQ08 111 aa11.49□□□□□ -0.57
SPOCK3-219ENST00000511905 A6NED7 52 aa11.43□□□□□ -0.58
SPOCK3-219ENST00000511905 DYNC1H1Q14204 4646 aaKnown RBP11.42□□□□□ -0.58
SPOCK3-219ENST00000511905 SMR3BP02814 79 aaPredicted RBP11.41□□□□□ -0.58
SPOCK3-219ENST00000511905 CDC42SE1Q9NRR8 79 aa11.41□□□□□ -0.58
SPOCK3-219ENST00000511905 IGKV2D-30A0A075B6S6 120 aa11.4□□□□□ -0.58
SPOCK3-219ENST00000511905 C7orf65Q6ZTY9 151 aa11.39□□□□□ -0.59
SPOCK3-219ENST00000511905 LCA10Q71F78 164 aa11.39□□□□□ -0.59
SPOCK3-219ENST00000511905 ATP11AUNQ6ZP68 121 aa11.38□□□□□ -0.59
SPOCK3-219ENST00000511905 C20orf166-AS1Q96NR2 134 aa11.37□□□□□ -0.59
SPOCK3-219ENST00000511905 A8MUU9 505 aa11.35□□□□□ -0.59
SPOCK3-219ENST00000511905 PKHD1P08F94 4074 aa11.33□□□□□ -0.6
SPOCK3-219ENST00000511905 A8MU10 97 aa11.29□□□□□ -0.6
SPOCK3-219ENST00000511905 APOBP04114 4563 aaKnown RBP11.29□□□□□ -0.6
SPOCK3-219ENST00000511905 PKHD1L1Q86WI1 4243 aa11.28□□□□□ -0.6
SPOCK3-219ENST00000511905 SPINK7P58062 85 aa11.27□□□□□ -0.61
SPOCK3-219ENST00000511905 A0A1B0GU69 56 aa11.23□□□□□ -0.61
SPOCK3-219ENST00000511905 PMAIP1Q13794 54 aa11.23□□□□□ -0.61
SPOCK3-219ENST00000511905 C9orf92A6NGG3 77 aa11.16□□□□□ -0.62
SPOCK3-219ENST00000511905 SPTSSBQ8NFR3 76 aa11.16□□□□□ -0.62
SPOCK3-219ENST00000511905 RYR2Q92736 4967 aa11.16□□□□□ -0.62
SPOCK3-219ENST00000511905 FAT1Q14517 4588 aa11.14□□□□□ -0.63
SPOCK3-219ENST00000511905 A6NN06 94 aa11.12□□□□□ -0.63
SPOCK3-219ENST00000511905 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
SPOCK3-219ENST00000511905 SPATA8Q6RVD6 105 aa11.1□□□□□ -0.63
SPOCK3-219ENST00000511905 Q8N1X5 172 aa11.09□□□□□ -0.63
SPOCK3-219ENST00000511905 UQCR11O14957 56 aa11.06□□□□□ -0.64
SPOCK3-219ENST00000511905 KTN1-AS1Q86SY8 53 aa11.04□□□□□ -0.64
SPOCK3-219ENST00000511905 SEC61GP60059 68 aa10.98□□□□□ -0.65
SPOCK3-219ENST00000511905 MIR22HGQ0VDD5 57 aa10.98□□□□□ -0.65
SPOCK3-219ENST00000511905 Q5VSD8 79 aa10.98□□□□□ -0.65
SPOCK3-219ENST00000511905 KRTAP3-1Q9BYR8 98 aa10.98□□□□□ -0.65
SPOCK3-219ENST00000511905 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
SPOCK3-219ENST00000511905 COX6B2Q6YFQ2 88 aa10.92□□□□□ -0.66
SPOCK3-219ENST00000511905 FAT3Q8TDW7 4589 aa10.88□□□□□ -0.67
SPOCK3-219ENST00000511905 KMT2CQ8NEZ4 4911 aaKnown RBP10.87□□□□□ -0.67
SPOCK3-219ENST00000511905 RPL37P61927 97 aaKnown RBP10.86□□□□□ -0.67
SPOCK3-219ENST00000511905 TNXBP22105 4242 aa10.84□□□□□ -0.67
SPOCK3-219ENST00000511905 HSPG2P98160 4391 aa10.78□□□□□ -0.68
SPOCK3-219ENST00000511905 XP32Q5T750 250 aa10.75□□□□□ -0.69
SPOCK3-219ENST00000511905 RYR1P21817 5038 aa10.71□□□□□ -0.69
SPOCK3-219ENST00000511905 MT1HL1P0DM35 61 aa10.7□□□□□ -0.7
SPOCK3-219ENST00000511905 LRP1Q07954 4544 aaKnown RBP10.69□□□□□ -0.7
SPOCK3-219ENST00000511905 A0A1B0GU33 70 aa10.69□□□□□ -0.7
SPOCK3-219ENST00000511905 H1FX-AS1Q4G0G2 97 aa10.67□□□□□ -0.7
SPOCK3-219ENST00000511905 KRTAP17-1Q9BYP8 105 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 249.5 ms