RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 A0A0G2JQZ4 141 aa5.78□□□□□ -1.48
PTPN20-225ENST00000511769 A0A1B0GW54 56 aa5.78□□□□□ -1.48
PTPN20-225ENST00000511769 KRTAP13-2Q52LG2 175 aa5.78□□□□□ -1.48
PTPN20-225ENST00000511769 PRR26Q8N8Z3 221 aa5.78□□□□□ -1.48
PTPN20-225ENST00000511769 A0A1W2PNM2 257 aa5.77□□□□□ -1.49
PTPN20-225ENST00000511769 FAM240AA0A1B0GVK7 77 aa5.76□□□□□ -1.49
PTPN20-225ENST00000511769 Q6Q795 121 aa5.76□□□□□ -1.49
PTPN20-225ENST00000511769 HRCT1Q6UXD1 115 aa5.76□□□□□ -1.49
PTPN20-225ENST00000511769 CD164Q04900 197 aa5.75□□□□□ -1.49
PTPN20-225ENST00000511769 TRBV7-7A0A0K0K1E9 115 aa5.74□□□□□ -1.49
PTPN20-225ENST00000511769 SPAG11AQ6PDA7 123 aa5.74□□□□□ -1.49
PTPN20-225ENST00000511769 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
PTPN20-225ENST00000511769 A0A087WSZ3 146 aa5.73□□□□□ -1.49
PTPN20-225ENST00000511769 NREPQ16612 68 aa5.73□□□□□ -1.49
PTPN20-225ENST00000511769 LINC00304Q8N9R0 145 aa5.73□□□□□ -1.49
PTPN20-225ENST00000511769 LINC00846Q9NV44 126 aa5.73□□□□□ -1.49
PTPN20-225ENST00000511769 SS18L2Q9UHA2 77 aa5.73□□□□□ -1.49
PTPN20-225ENST00000511769 SPINK1P00995 79 aa5.71□□□□□ -1.5
PTPN20-225ENST00000511769 PRR4Q16378 134 aa5.7□□□□□ -1.5
PTPN20-225ENST00000511769 LIMD2Q9BT23 127 aa5.7□□□□□ -1.5
PTPN20-225ENST00000511769 Q6ZVQ6 151 aa5.69□□□□□ -1.5
PTPN20-225ENST00000511769 LINC00643Q86TS7 51 aa5.67□□□□□ -1.5
PTPN20-225ENST00000511769 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
PTPN20-225ENST00000511769 BPY2O14599 106 aa5.65□□□□□ -1.51
PTPN20-225ENST00000511769 Q5XG85 94 aa5.65□□□□□ -1.51
PTPN20-225ENST00000511769 J3KT08 172 aa5.64□□□□□ -1.51
PTPN20-225ENST00000511769 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
PTPN20-225ENST00000511769 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
PTPN20-225ENST00000511769 MUC17Q685J3 4493 aa5.63□□□□□ -1.51
PTPN20-225ENST00000511769 DEFB116Q30KQ4 102 aa5.63□□□□□ -1.51
PTPN20-225ENST00000511769 ATP5EP2Q5VTU8 51 aa5.63□□□□□ -1.51
PTPN20-225ENST00000511769 LINC00472Q9H8W2 130 aa5.63□□□□□ -1.51
PTPN20-225ENST00000511769 IGKV3D-7A0A0C4DH55 119 aa5.62□□□□□ -1.51
PTPN20-225ENST00000511769 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
PTPN20-225ENST00000511769 CXCL6P80162 114 aa5.62□□□□□ -1.51
PTPN20-225ENST00000511769 NDUFB1O75438 58 aa5.6□□□□□ -1.51
PTPN20-225ENST00000511769 C1orf195Q5TG92 126 aa5.59□□□□□ -1.51
PTPN20-225ENST00000511769 Q96NJ1 140 aa5.59□□□□□ -1.51
PTPN20-225ENST00000511769 MT-ATP8P03928 68 aa5.58□□□□□ -1.52
PTPN20-225ENST00000511769 HIST1H4AP62805 103 aaKnown RBP5.58□□□□□ -1.52
PTPN20-225ENST00000511769 A8MWP4 228 aa5.57□□□□□ -1.52
PTPN20-225ENST00000511769 DSCR10P59022 87 aa5.56□□□□□ -1.52
PTPN20-225ENST00000511769 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
PTPN20-225ENST00000511769 IMUPQ9GZP8 106 aa5.56□□□□□ -1.52
PTPN20-225ENST00000511769 Q8N9L7 120 aa5.54□□□□□ -1.52
PTPN20-225ENST00000511769 IGHV6-1A0A0B4J1U7 121 aa5.53□□□□□ -1.52
PTPN20-225ENST00000511769 K7EQZ3 153 aa5.53□□□□□ -1.52
PTPN20-225ENST00000511769 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
PTPN20-225ENST00000511769 RETNLBQ9BQ08 111 aa5.53□□□□□ -1.52
PTPN20-225ENST00000511769 A0A1B0GVX0 72 aa5.52□□□□□ -1.53
PTPN20-225ENST00000511769 C8orf87E5RJ46 101 aa5.5□□□□□ -1.53
PTPN20-225ENST00000511769 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
PTPN20-225ENST00000511769 A0A087WVE0 104 aa5.49□□□□□ -1.53
PTPN20-225ENST00000511769 LINC00313P59037 77 aa5.49□□□□□ -1.53
PTPN20-225ENST00000511769 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
PTPN20-225ENST00000511769 HCG22E2RYF7 251 aa5.48□□□□□ -1.53
PTPN20-225ENST00000511769 C8orf17Q9NRJ1 99 aa5.48□□□□□ -1.53
PTPN20-225ENST00000511769 IGLV7-46A0A075B6I9 117 aa5.47□□□□□ -1.53
PTPN20-225ENST00000511769 CASC2Q6XLA1 102 aa5.47□□□□□ -1.53
PTPN20-225ENST00000511769 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
PTPN20-225ENST00000511769 MMP24-AS1A0A0U1RRL7 71 aa5.46□□□□□ -1.54
PTPN20-225ENST00000511769 hDV103S1A0JD37 113 aa5.46□□□□□ -1.54
PTPN20-225ENST00000511769 SCGB1A1P11684 91 aa5.46□□□□□ -1.54
PTPN20-225ENST00000511769 SSPOA2VEC9 5147 aa5.45□□□□□ -1.54
PTPN20-225ENST00000511769 FAM236AA0A1B0GUQ0 79 aa5.45□□□□□ -1.54
PTPN20-225ENST00000511769 FAM236BA0A1B0GV22 79 aa5.45□□□□□ -1.54
PTPN20-225ENST00000511769 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
PTPN20-225ENST00000511769 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
PTPN20-225ENST00000511769 TMEM254Q8TBM7 123 aa5.44□□□□□ -1.54
PTPN20-225ENST00000511769 MRPL34Q9BQ48 92 aaKnown RBP5.43□□□□□ -1.54
PTPN20-225ENST00000511769 USH2AO75445 5202 aa5.42□□□□□ -1.54
PTPN20-225ENST00000511769 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
PTPN20-225ENST00000511769 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
PTPN20-225ENST00000511769 NDUFS5O43920 106 aa5.41□□□□□ -1.54
PTPN20-225ENST00000511769 MACF1Q9UPN3 7388 aaKnown RBP5.4□□□□□ -1.54
PTPN20-225ENST00000511769 ATOX1O00244 68 aa5.4□□□□□ -1.55
PTPN20-225ENST00000511769 SMIM20Q8N5G0 67 aa5.39□□□□□ -1.55
PTPN20-225ENST00000511769 KRTAP13-3Q3SY46 172 aa5.38□□□□□ -1.55
PTPN20-225ENST00000511769 KRTAP16-1A8MUX0 517 aa5.37□□□□□ -1.55
PTPN20-225ENST00000511769 TPRXLQ17RH7 258 aa5.37□□□□□ -1.55
PTPN20-225ENST00000511769 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
PTPN20-225ENST00000511769 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
PTPN20-225ENST00000511769 Q8N9P0 234 aaPredicted RBP5.36□□□□□ -1.55
PTPN20-225ENST00000511769 MT1HP80294 61 aa5.35□□□□□ -1.55
PTPN20-225ENST00000511769 TRAV7A0A075B6U4 112 aa5.34□□□□□ -1.55
PTPN20-225ENST00000511769 UQCRQO14949 82 aa5.34□□□□□ -1.55
PTPN20-225ENST00000511769 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.55
PTPN20-225ENST00000511769 A8MUU9 505 aa5.33□□□□□ -1.56
PTPN20-225ENST00000511769 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
PTPN20-225ENST00000511769 ANAPC13Q9BS18 74 aa5.33□□□□□ -1.56
PTPN20-225ENST00000511769 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
PTPN20-225ENST00000511769 OCR1Q9BZK8 76 aa5.33□□□□□ -1.56
PTPN20-225ENST00000511769 Q75L30 129 aa5.32□□□□□ -1.56
PTPN20-225ENST00000511769 SERP2Q8N6R1 65 aa5.31□□□□□ -1.56
PTPN20-225ENST00000511769 C5orf47Q569G3 176 aa5.3□□□□□ -1.56
PTPN20-225ENST00000511769 ATP11AUNQ6ZP68 121 aa5.3□□□□□ -1.56
PTPN20-225ENST00000511769 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
PTPN20-225ENST00000511769 MP68P56378 58 aa5.28□□□□□ -1.56
PTPN20-225ENST00000511769 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
PTPN20-225ENST00000511769 TRAV22A0A0B4J277 110 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms