RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 LINC00304Q8N9R0 145 aa5.27□□□□□ -1.57
NR1I3-228ENST00000511676 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
NR1I3-228ENST00000511676 UBR4Q5T4S7 5183 aa5.26□□□□□ -1.57
NR1I3-228ENST00000511676 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
NR1I3-228ENST00000511676 PRR26Q8N8Z3 221 aa5.26□□□□□ -1.57
NR1I3-228ENST00000511676 A8MWP4 228 aa5.25□□□□□ -1.57
NR1I3-228ENST00000511676 Q96NJ1 140 aa5.25□□□□□ -1.57
NR1I3-228ENST00000511676 NDUFB1O75438 58 aa5.24□□□□□ -1.57
NR1I3-228ENST00000511676 DSCR10P59022 87 aa5.24□□□□□ -1.57
NR1I3-228ENST00000511676 IGKV4-1P06312 121 aa5.23□□□□□ -1.57
NR1I3-228ENST00000511676 HIST1H4AP62805 103 aaKnown RBP5.23□□□□□ -1.57
NR1I3-228ENST00000511676 HRCT1Q6UXD1 115 aa5.23□□□□□ -1.57
NR1I3-228ENST00000511676 PRR15Q8IV56 129 aa5.22□□□□□ -1.57
NR1I3-228ENST00000511676 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
NR1I3-228ENST00000511676 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
NR1I3-228ENST00000511676 K7EQZ3 153 aa5.2□□□□□ -1.58
NR1I3-228ENST00000511676 ATOX1O00244 68 aa5.2□□□□□ -1.58
NR1I3-228ENST00000511676 SMIM20Q8N5G0 67 aa5.2□□□□□ -1.58
NR1I3-228ENST00000511676 A0A1B0GVX0 72 aa5.19□□□□□ -1.58
NR1I3-228ENST00000511676 C1orf195Q5TG92 126 aa5.19□□□□□ -1.58
NR1I3-228ENST00000511676 A0A087WVE0 104 aa5.18□□□□□ -1.58
NR1I3-228ENST00000511676 C8orf87E5RJ46 101 aa5.18□□□□□ -1.58
NR1I3-228ENST00000511676 PRR4Q16378 134 aa5.18□□□□□ -1.58
NR1I3-228ENST00000511676 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
NR1I3-228ENST00000511676 DEFB116Q30KQ4 102 aa5.16□□□□□ -1.58
NR1I3-228ENST00000511676 Q8N9L7 120 aa5.16□□□□□ -1.58
NR1I3-228ENST00000511676 TNXBP22105 4242 aa5.16□□□□□ -1.58
NR1I3-228ENST00000511676 LRP2P98164 4655 aa5.15□□□□□ -1.58
NR1I3-228ENST00000511676 MMP24-AS1A0A0U1RRL7 71 aa5.14□□□□□ -1.59
NR1I3-228ENST00000511676 FP248Q71RG6 208 aaPredicted RBP5.14□□□□□ -1.59
NR1I3-228ENST00000511676 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
NR1I3-228ENST00000511676 C8orf17Q9NRJ1 99 aa5.14□□□□□ -1.59
NR1I3-228ENST00000511676 CASC2Q6XLA1 102 aa5.13□□□□□ -1.59
NR1I3-228ENST00000511676 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
NR1I3-228ENST00000511676 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
NR1I3-228ENST00000511676 TMEM254Q8TBM7 123 aa5.12□□□□□ -1.59
NR1I3-228ENST00000511676 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
NR1I3-228ENST00000511676 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
NR1I3-228ENST00000511676 IGHV6-1A0A0B4J1U7 121 aa5.11□□□□□ -1.59
NR1I3-228ENST00000511676 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
NR1I3-228ENST00000511676 LINC00313P59037 77 aa5.1□□□□□ -1.59
NR1I3-228ENST00000511676 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
NR1I3-228ENST00000511676 MRPL34Q9BQ48 92 aaKnown RBP5.09□□□□□ -1.59
NR1I3-228ENST00000511676 OCR1Q9BZK8 76 aa5.09□□□□□ -1.59
NR1I3-228ENST00000511676 UQCRQO14949 82 aa5.08□□□□□ -1.6
NR1I3-228ENST00000511676 PCP4P48539 62 aa5.08□□□□□ -1.6
NR1I3-228ENST00000511676 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
NR1I3-228ENST00000511676 KRTAP4-12Q9BQ66 201 aa5.08□□□□□ -1.6
NR1I3-228ENST00000511676 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
NR1I3-228ENST00000511676 COX7CP15954 63 aa5.07□□□□□ -1.6
NR1I3-228ENST00000511676 WFDC13Q8IUB5 93 aa5.07□□□□□ -1.6
NR1I3-228ENST00000511676 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
NR1I3-228ENST00000511676 H3BPC8 53 aa5.05□□□□□ -1.6
NR1I3-228ENST00000511676 C5orf47Q569G3 176 aa5.05□□□□□ -1.6
NR1I3-228ENST00000511676 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
NR1I3-228ENST00000511676 KRTAP16-1A8MUX0 517 aa5.04□□□□□ -1.6
NR1I3-228ENST00000511676 TPRXLQ17RH7 258 aa5.04□□□□□ -1.6
NR1I3-228ENST00000511676 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
NR1I3-228ENST00000511676 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
NR1I3-228ENST00000511676 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
NR1I3-228ENST00000511676 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
NR1I3-228ENST00000511676 IGLV7-46A0A075B6I9 117 aa5.01□□□□□ -1.61
NR1I3-228ENST00000511676 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
NR1I3-228ENST00000511676 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
NR1I3-228ENST00000511676 MP68P56378 58 aa5□□□□□ -1.61
NR1I3-228ENST00000511676 C20orf166-AS1Q96NR2 134 aa5□□□□□ -1.61
NR1I3-228ENST00000511676 A8MUU9 505 aa4.99□□□□□ -1.61
NR1I3-228ENST00000511676 RETNLBQ9BQ08 111 aa4.99□□□□□ -1.61
NR1I3-228ENST00000511676 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
NR1I3-228ENST00000511676 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
NR1I3-228ENST00000511676 NDUFC1O43677 76 aa4.98□□□□□ -1.61
NR1I3-228ENST00000511676 NDUFS5O43920 106 aa4.98□□□□□ -1.61
NR1I3-228ENST00000511676 Q75L30 129 aa4.98□□□□□ -1.61
NR1I3-228ENST00000511676 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
NR1I3-228ENST00000511676 KRTAP13-3Q3SY46 172 aa4.97□□□□□ -1.61
NR1I3-228ENST00000511676 H0Y9P7 68 aa4.96□□□□□ -1.62
NR1I3-228ENST00000511676 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
NR1I3-228ENST00000511676 LOC101927531A0A1B0GV80 90 aa4.95□□□□□ -1.62
NR1I3-228ENST00000511676 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
NR1I3-228ENST00000511676 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
NR1I3-228ENST00000511676 LPAP08519 4548 aa4.94□□□□□ -1.62
NR1I3-228ENST00000511676 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
NR1I3-228ENST00000511676 C9orf92A6NGG3 77 aa4.92□□□□□ -1.62
NR1I3-228ENST00000511676 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
NR1I3-228ENST00000511676 C1orf64Q8NEQ6 169 aa4.91□□□□□ -1.62
NR1I3-228ENST00000511676 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
NR1I3-228ENST00000511676 MUC2Q02817 5179 aa4.9□□□□□ -1.62
NR1I3-228ENST00000511676 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
NR1I3-228ENST00000511676 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
NR1I3-228ENST00000511676 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
NR1I3-228ENST00000511676 TMEM258P61165 79 aa4.89□□□□□ -1.63
NR1I3-228ENST00000511676 Q5W150 140 aa4.89□□□□□ -1.63
NR1I3-228ENST00000511676 H7BZZ5 65 aa4.88□□□□□ -1.63
NR1I3-228ENST00000511676 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
NR1I3-228ENST00000511676 ATP11AUNQ6ZP68 121 aa4.87□□□□□ -1.63
NR1I3-228ENST00000511676 SPANXA2-OT1Q8N9U9 137 aa4.87□□□□□ -1.63
NR1I3-228ENST00000511676 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
NR1I3-228ENST00000511676 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
NR1I3-228ENST00000511676 CYP4F30PQ9H0H9 118 aa4.86□□□□□ -1.63
NR1I3-228ENST00000511676 CYSTM1Q9H1C7 97 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms