RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 H3BQ85 93 aa4.19□□□□□ -1.74
SMAD1-210ENST00000511255 LST1O00453 97 aa4.19□□□□□ -1.74
SMAD1-210ENST00000511255 TEN1Q86WV5 123 aa4.19□□□□□ -1.74
SMAD1-210ENST00000511255 SS18L2Q9UHA2 77 aa4.19□□□□□ -1.74
SMAD1-210ENST00000511255 A0A087WSZ3 146 aa4.18□□□□□ -1.74
SMAD1-210ENST00000511255 TSTD3H0UI37 97 aa4.18□□□□□ -1.74
SMAD1-210ENST00000511255 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
SMAD1-210ENST00000511255 MUC17Q685J3 4493 aa4.17□□□□□ -1.74
SMAD1-210ENST00000511255 TRACP01848 142 aa4.17□□□□□ -1.74
SMAD1-210ENST00000511255 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
SMAD1-210ENST00000511255 Q6Q795 121 aa4.17□□□□□ -1.74
SMAD1-210ENST00000511255 ANKRD29Q8N6D5 301 aa4.17□□□□□ -1.74
SMAD1-210ENST00000511255 NAA38Q9BRA0 125 aaKnown RBP4.17□□□□□ -1.74
SMAD1-210ENST00000511255 BATFQ16520 125 aa4.16□□□□□ -1.74
SMAD1-210ENST00000511255 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
SMAD1-210ENST00000511255 UBE2V1Q13404 147 aa4.15□□□□□ -1.75
SMAD1-210ENST00000511255 VPS25Q9BRG1 176 aa4.15□□□□□ -1.75
SMAD1-210ENST00000511255 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
SMAD1-210ENST00000511255 MUC2Q02817 5179 aa4.15□□□□□ -1.75
SMAD1-210ENST00000511255 LOC105371267A0A1B0GV96 52 aa4.14□□□□□ -1.75
SMAD1-210ENST00000511255 ATXN8Q156A1 80 aa4.14□□□□□ -1.75
SMAD1-210ENST00000511255 OBSCN-AS1Q96MR7 158 aa4.14□□□□□ -1.75
SMAD1-210ENST00000511255 CCKP06307 115 aa4.13□□□□□ -1.75
SMAD1-210ENST00000511255 BAALC-AS2P0C853 105 aa4.13□□□□□ -1.75
SMAD1-210ENST00000511255 RPL37P61927 97 aaKnown RBP4.13□□□□□ -1.75
SMAD1-210ENST00000511255 RBM3P98179 157 aaKnown RBP4.13□□□□□ -1.75
SMAD1-210ENST00000511255 LYRM7Q5U5X0 104 aa4.13□□□□□ -1.75
SMAD1-210ENST00000511255 SIGMAR1Q99720 223 aa4.13□□□□□ -1.75
SMAD1-210ENST00000511255 TRBV7-4A0A0J9YYF1 115 aa4.12□□□□□ -1.75
SMAD1-210ENST00000511255 DSCR8Q96T75 97 aa4.12□□□□□ -1.75
SMAD1-210ENST00000511255 Q96NJ1 140 aa4.11□□□□□ -1.75
SMAD1-210ENST00000511255 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
SMAD1-210ENST00000511255 C9JAW5 83 aa4.09□□□□□ -1.75
SMAD1-210ENST00000511255 DSCR10P59022 87 aa4.09□□□□□ -1.75
SMAD1-210ENST00000511255 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
SMAD1-210ENST00000511255 ATP11AUNQ6ZP68 121 aa4.09□□□□□ -1.75
SMAD1-210ENST00000511255 TRBV20-1A0A075B6N2 111 aa4.08□□□□□ -1.76
SMAD1-210ENST00000511255 JMJD7-PLA2G4BH0Y9G9 81 aa4.08□□□□□ -1.76
SMAD1-210ENST00000511255 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
SMAD1-210ENST00000511255 Q75L30 129 aa4.07□□□□□ -1.76
SMAD1-210ENST00000511255 TAX1BP3O14907 124 aa4.06□□□□□ -1.76
SMAD1-210ENST00000511255 LINC00313P59037 77 aa4.06□□□□□ -1.76
SMAD1-210ENST00000511255 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
SMAD1-210ENST00000511255 C14orf132Q9NPU4 83 aa4.06□□□□□ -1.76
SMAD1-210ENST00000511255 IGHV6-1A0A0B4J1U7 121 aa4.05□□□□□ -1.76
SMAD1-210ENST00000511255 A0A1W2PPM0 123 aa4.04□□□□□ -1.76
SMAD1-210ENST00000511255 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
SMAD1-210ENST00000511255 Q6ZQT0 140 aa4.04□□□□□ -1.76
SMAD1-210ENST00000511255 MTURNQ8N3F0 131 aa4.04□□□□□ -1.76
SMAD1-210ENST00000511255 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
SMAD1-210ENST00000511255 LOC110117498A0A087WWA1 95 aa4.03□□□□□ -1.76
SMAD1-210ENST00000511255 A8MUU9 505 aa4.03□□□□□ -1.76
SMAD1-210ENST00000511255 PDE6GP18545 87 aa4.03□□□□□ -1.76
SMAD1-210ENST00000511255 H3BT86 120 aa4.02□□□□□ -1.77
SMAD1-210ENST00000511255 J3KT08 172 aa4.02□□□□□ -1.77
SMAD1-210ENST00000511255 NOTCH2NLQ7Z3S9 236 aa4.02□□□□□ -1.77
SMAD1-210ENST00000511255 A0A1B0GVX0 72 aa4.01□□□□□ -1.77
SMAD1-210ENST00000511255 C8orf87E5RJ46 101 aa4.01□□□□□ -1.77
SMAD1-210ENST00000511255 NDUFB1O75438 58 aa4.01□□□□□ -1.77
SMAD1-210ENST00000511255 SPCS1Q9Y6A9 102 aa4.01□□□□□ -1.77
SMAD1-210ENST00000511255 A0A1B0GW54 56 aa4□□□□□ -1.77
SMAD1-210ENST00000511255 KRTAP19-2Q3LHN2 52 aa4□□□□□ -1.77
SMAD1-210ENST00000511255 COL5A1-AS1Q5SY13 56 aa4□□□□□ -1.77
SMAD1-210ENST00000511255 LCE1FQ5T754 118 aa4□□□□□ -1.77
SMAD1-210ENST00000511255 KRTAP16-1A8MUX0 517 aa3.99□□□□□ -1.77
SMAD1-210ENST00000511255 NREPQ16612 68 aa3.99□□□□□ -1.77
SMAD1-210ENST00000511255 PCP4L1A6NKN8 68 aa3.98□□□□□ -1.77
SMAD1-210ENST00000511255 M0R2T5 61 aa3.98□□□□□ -1.77
SMAD1-210ENST00000511255 MT1HP80294 61 aa3.98□□□□□ -1.77
SMAD1-210ENST00000511255 A8MWP4 228 aa3.97□□□□□ -1.77
SMAD1-210ENST00000511255 C8orf17Q9NRJ1 99 aa3.96□□□□□ -1.78
SMAD1-210ENST00000511255 IGKV3D-7A0A0C4DH55 119 aa3.95□□□□□ -1.78
SMAD1-210ENST00000511255 K7EP34 96 aa3.94□□□□□ -1.78
SMAD1-210ENST00000511255 FAM236DA0A1B0GTK5 79 aa3.93□□□□□ -1.78
SMAD1-210ENST00000511255 FAM236CP0DP71 79 aa3.93□□□□□ -1.78
SMAD1-210ENST00000511255 Q6ZVQ6 151 aa3.93□□□□□ -1.78
SMAD1-210ENST00000511255 PRR15Q8IV56 129 aa3.93□□□□□ -1.78
SMAD1-210ENST00000511255 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
SMAD1-210ENST00000511255 BPY2O14599 106 aa3.92□□□□□ -1.78
SMAD1-210ENST00000511255 KRTAP10-5P60370 271 aa3.92□□□□□ -1.78
SMAD1-210ENST00000511255 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
SMAD1-210ENST00000511255 GTF2H5Q6ZYL4 71 aa3.92□□□□□ -1.78
SMAD1-210ENST00000511255 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
SMAD1-210ENST00000511255 K7EQZ3 153 aa3.91□□□□□ -1.78
SMAD1-210ENST00000511255 RBM12B-AS1Q9P1G2 102 aa3.91□□□□□ -1.78
SMAD1-210ENST00000511255 PRO0461Q9UI25 63 aa3.91□□□□□ -1.78
SMAD1-210ENST00000511255 MMP24-AS1A0A0U1RRL7 71 aa3.9□□□□□ -1.79
SMAD1-210ENST00000511255 NDUFS5O43920 106 aa3.9□□□□□ -1.79
SMAD1-210ENST00000511255 hDV103S1A0JD37 113 aa3.89□□□□□ -1.79
SMAD1-210ENST00000511255 HRES1P13985 223 aa3.89□□□□□ -1.79
SMAD1-210ENST00000511255 TMEM254Q8TBM7 123 aa3.89□□□□□ -1.79
SMAD1-210ENST00000511255 MRPL34Q9BQ48 92 aaKnown RBP3.89□□□□□ -1.79
SMAD1-210ENST00000511255 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
SMAD1-210ENST00000511255 WFDC13Q8IUB5 93 aa3.88□□□□□ -1.79
SMAD1-210ENST00000511255 Q8N9L7 120 aa3.88□□□□□ -1.79
SMAD1-210ENST00000511255 SPINK7P58062 85 aa3.87□□□□□ -1.79
SMAD1-210ENST00000511255 F8W1H4 67 aa3.86□□□□□ -1.79
SMAD1-210ENST00000511255 ETDBQ3ZM63 59 aa3.86□□□□□ -1.79
SMAD1-210ENST00000511255 LINC00846Q9NV44 126 aa3.86□□□□□ -1.79
SMAD1-210ENST00000511255 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms