RNA–Protein interactions for RNA: ENST00000509855.1

COL6A4P2-205, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 506 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-205ENST00000509855 TMEM167AQ8TBQ9 72 aa0.59□□□□□ -2.31
COL6A4P2-205ENST00000509855 AKAP13Q12802 2813 aa0.58□□□□□ -2.32
COL6A4P2-205ENST00000509855 KRTAP2-3P0C7H8 128 aa0.58□□□□□ -2.32
COL6A4P2-205ENST00000509855 KRTAP2-4Q9BYR9 128 aa0.58□□□□□ -2.32
COL6A4P2-205ENST00000509855 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
COL6A4P2-205ENST00000509855 MAP1BP46821 2468 aaKnown RBP0.58□□□□□ -2.32
COL6A4P2-205ENST00000509855 PRRC2CQ9Y520 2896 aaKnown RBP0.58□□□□□ -2.32
COL6A4P2-205ENST00000509855 H3BSH0 61 aa0.57□□□□□ -2.32
COL6A4P2-205ENST00000509855 DEFB110Q30KQ9 67 aa0.57□□□□□ -2.32
COL6A4P2-205ENST00000509855 RHPN1-AS1Q9BWJ2 59 aa0.57□□□□□ -2.32
COL6A4P2-205ENST00000509855 CHD6Q8TD26 2715 aa0.57□□□□□ -2.32
COL6A4P2-205ENST00000509855 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
COL6A4P2-205ENST00000509855 VWFP04275 2813 aa0.56□□□□□ -2.32
COL6A4P2-205ENST00000509855 APCP25054 2843 aa0.56□□□□□ -2.32
COL6A4P2-205ENST00000509855 ACACAQ13085 2346 aa0.56□□□□□ -2.32
COL6A4P2-205ENST00000509855 DSTQ03001 7570 aaKnown RBP0.56□□□□□ -2.32
COL6A4P2-205ENST00000509855 WNK1Q9H4A3 2382 aa0.55□□□□□ -2.32
COL6A4P2-205ENST00000509855 MTORP42345 2549 aa0.55□□□□□ -2.32
COL6A4P2-205ENST00000509855 ZFYVE26Q68DK2 2539 aa0.55□□□□□ -2.32
COL6A4P2-205ENST00000509855 MUC2Q02817 5179 aa0.54□□□□□ -2.32
COL6A4P2-205ENST00000509855 OTOGQ6ZRI0 2925 aa0.54□□□□□ -2.32
COL6A4P2-205ENST00000509855 FRAS1Q86XX4 4008 aa0.54□□□□□ -2.32
COL6A4P2-205ENST00000509855 A0A0C4DFX4 3053 aa0.53□□□□□ -2.32
COL6A4P2-205ENST00000509855 FAM186AA6NE01 2351 aa0.53□□□□□ -2.32
COL6A4P2-205ENST00000509855 CELSR1Q9NYQ6 3014 aa0.53□□□□□ -2.32
COL6A4P2-205ENST00000509855 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 KIAA1109Q2LD37 5005 aa0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 NAV2Q8IVL1 2488 aa0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 PRM1P04553 51 aa0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 SRRM2Q9UQ35 2752 aaKnown RBP0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 PRKDCP78527 4128 aaKnown RBP0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 FAT2Q9NYQ8 4349 aa0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 DMBT1Q9UGM3 2413 aaPredicted RBP0.52□□□□□ -2.33
COL6A4P2-205ENST00000509855 BSNQ9UPA5 3926 aa0.51□□□□□ -2.33
COL6A4P2-205ENST00000509855 TNRC18O15417 2968 aaPredicted RBP0.51□□□□□ -2.33
COL6A4P2-205ENST00000509855 DEFB104AQ8WTQ1 72 aa0.51□□□□□ -2.33
COL6A4P2-205ENST00000509855 EPG5Q9HCE0 2579 aa0.51□□□□□ -2.33
COL6A4P2-205ENST00000509855 NCOR2Q9Y618 2525 aa0.51□□□□□ -2.33
COL6A4P2-205ENST00000509855 FSIP2Q5CZC0 6907 aa0.51□□□□□ -2.33
COL6A4P2-205ENST00000509855 RIF1Q5UIP0 2472 aaKnown RBP0.5□□□□□ -2.33
COL6A4P2-205ENST00000509855 ACANP16112 2415 aa0.5□□□□□ -2.33
COL6A4P2-205ENST00000509855 STAB1Q9NY15 2570 aa0.5□□□□□ -2.33
COL6A4P2-205ENST00000509855 SPRR2DP22532 72 aa0.5□□□□□ -2.33
COL6A4P2-205ENST00000509855 SPRR2BP35325 72 aa0.5□□□□□ -2.33
COL6A4P2-205ENST00000509855 RPL39P5Q59GN2 51 aa0.5□□□□□ -2.33
COL6A4P2-205ENST00000509855 NEBP20929 6669 aa0.5□□□□□ -2.33
COL6A4P2-205ENST00000509855 TNXBP22105 4242 aa0.49□□□□□ -2.33
COL6A4P2-205ENST00000509855 UBR5O95071 2799 aaPredicted RBP0.49□□□□□ -2.33
COL6A4P2-205ENST00000509855 SETD2Q9BYW2 2564 aaPredicted RBP0.49□□□□□ -2.33
COL6A4P2-205ENST00000509855 SETXQ7Z333 2677 aaKnown RBP0.48□□□□□ -2.33
COL6A4P2-205ENST00000509855 COL6A5A8TX70 2615 aa0.48□□□□□ -2.33
COL6A4P2-205ENST00000509855 PKD1L1Q8TDX9 2849 aa0.48□□□□□ -2.33
COL6A4P2-205ENST00000509855 HUWE1Q7Z6Z7 4374 aaKnown RBP0.48□□□□□ -2.33
COL6A4P2-205ENST00000509855 DEFB108AA8MXU0 73 aa0.47□□□□□ -2.33
COL6A4P2-205ENST00000509855 LRRK2Q5S007 2527 aa0.47□□□□□ -2.33
COL6A4P2-205ENST00000509855 NF1P21359 2839 aa0.47□□□□□ -2.33
COL6A4P2-205ENST00000509855 UTP20O75691 2785 aaKnown RBP0.47□□□□□ -2.33
COL6A4P2-205ENST00000509855 SYNE1Q8NF91 8797 aaKnown RBP0.46□□□□□ -2.34
COL6A4P2-205ENST00000509855 SPRR2AP35326 72 aa0.46□□□□□ -2.34
COL6A4P2-205ENST00000509855 KRTAP8-1Q8IUC2 63 aa0.46□□□□□ -2.34
COL6A4P2-205ENST00000509855 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
COL6A4P2-205ENST00000509855 KMT2DO14686 5537 aa0.46□□□□□ -2.34
COL6A4P2-205ENST00000509855 SPG11Q96JI7 2443 aa0.46□□□□□ -2.34
COL6A4P2-205ENST00000509855 SPTBN4Q9H254 2564 aa0.46□□□□□ -2.34
COL6A4P2-205ENST00000509855 FLNCQ14315 2725 aa0.45□□□□□ -2.34
COL6A4P2-205ENST00000509855 LYSTQ99698 3801 aa0.45□□□□□ -2.34
COL6A4P2-205ENST00000509855 DEFB124Q8NES8 71 aa0.45□□□□□ -2.34
COL6A4P2-205ENST00000509855 Q9Y3F1 56 aa0.45□□□□□ -2.34
COL6A4P2-205ENST00000509855 KMT2CQ8NEZ4 4911 aaKnown RBP0.45□□□□□ -2.34
COL6A4P2-205ENST00000509855 FLNBO75369 2602 aaKnown RBP0.45□□□□□ -2.34
COL6A4P2-205ENST00000509855 ANKHD1Q8IWZ3 2542 aaKnown RBP0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 MYCBP2O75592 4640 aa0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 NSD1Q96L73 2696 aaPredicted RBP0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 MT1AP04731 61 aa0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 DEFB136Q30KP8 78 aa0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 GCN1Q92616 2671 aaKnown RBP0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 CCDC168Q8NDH2 2452 aa0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 PDZD2O15018 2839 aa0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 SACSQ9NZJ4 4579 aa0.44□□□□□ -2.34
COL6A4P2-205ENST00000509855 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
COL6A4P2-205ENST00000509855 HTN1P15515 57 aa0.43□□□□□ -2.34
COL6A4P2-205ENST00000509855 CD52P31358 61 aa0.43□□□□□ -2.34
COL6A4P2-205ENST00000509855 ANKRD11Q6UB99 2663 aaPredicted RBP0.43□□□□□ -2.34
COL6A4P2-205ENST00000509855 DNAH11Q96DT5 4516 aa0.43□□□□□ -2.34
COL6A4P2-205ENST00000509855 SONP18583 2426 aaKnown RBP0.43□□□□□ -2.34
COL6A4P2-205ENST00000509855 IGSF10Q6WRI0 2623 aa0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 CEP250Q9BV73 2442 aa0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 KMT2AQ03164 3969 aa0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 A0A096LNI7 61 aa0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 RPS29P62273 56 aaKnown RBP0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 DEFB133Q30KQ1 61 aa0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 VPS13BQ7Z7G8 4022 aa0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 CHD7Q9P2D1 2997 aa0.42□□□□□ -2.34
COL6A4P2-205ENST00000509855 ACACBO00763 2458 aa0.41□□□□□ -2.34
COL6A4P2-205ENST00000509855 TEP1Q99973 2627 aaKnown RBP0.41□□□□□ -2.34
COL6A4P2-205ENST00000509855 LPAP08519 4548 aa0.41□□□□□ -2.34
COL6A4P2-205ENST00000509855 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
COL6A4P2-205ENST00000509855 DMXL1Q9Y485 3027 aa0.4□□□□□ -2.34
COL6A4P2-205ENST00000509855 PKD1P98161 4303 aa0.4□□□□□ -2.34
COL6A4P2-205ENST00000509855 VPS13DQ5THJ4 4388 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms