RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 LINC00208Q96KT6 92 aa8.61□□□□□ -1.03
PHF3-209ENST00000509330 PRR4Q16378 134 aa8.61□□□□□ -1.03
PHF3-209ENST00000509330 H0Y9P7 68 aa8.59□□□□□ -1.03
PHF3-209ENST00000509330 OXTP01178 125 aa8.59□□□□□ -1.03
PHF3-209ENST00000509330 FAM229BQ4G0N7 80 aa8.59□□□□□ -1.03
PHF3-209ENST00000509330 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
PHF3-209ENST00000509330 MP68P56378 58 aa8.57□□□□□ -1.04
PHF3-209ENST00000509330 CD164Q04900 197 aa8.57□□□□□ -1.04
PHF3-209ENST00000509330 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
PHF3-209ENST00000509330 NDUFC1O43677 76 aa8.55□□□□□ -1.04
PHF3-209ENST00000509330 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
PHF3-209ENST00000509330 MRPL34Q9BQ48 92 aaKnown RBP8.53□□□□□ -1.04
PHF3-209ENST00000509330 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.04
PHF3-209ENST00000509330 RETNLBQ9BQ08 111 aa8.52□□□□□ -1.05
PHF3-209ENST00000509330 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
PHF3-209ENST00000509330 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
PHF3-209ENST00000509330 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
PHF3-209ENST00000509330 KRTAP10-4P60372 401 aaPredicted RBP8.49□□□□□ -1.05
PHF3-209ENST00000509330 PCOTHQ58A44 107 aa8.48□□□□□ -1.05
PHF3-209ENST00000509330 LRP1Q07954 4544 aaKnown RBP8.48□□□□□ -1.05
PHF3-209ENST00000509330 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
PHF3-209ENST00000509330 LIMD2Q9BT23 127 aa8.47□□□□□ -1.05
PHF3-209ENST00000509330 LINC00313P59037 77 aa8.46□□□□□ -1.05
PHF3-209ENST00000509330 HSPG2P98160 4391 aa8.46□□□□□ -1.06
PHF3-209ENST00000509330 FLG2Q5D862 2391 aaPredicted RBP8.44□□□□□ -1.06
PHF3-209ENST00000509330 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
PHF3-209ENST00000509330 Q5W150 140 aa8.44□□□□□ -1.06
PHF3-209ENST00000509330 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
PHF3-209ENST00000509330 SERP1Q9Y6X1 66 aa8.43□□□□□ -1.06
PHF3-209ENST00000509330 SPINK1P00995 79 aa8.43□□□□□ -1.06
PHF3-209ENST00000509330 TP53AIP1Q9HCN2 124 aa8.43□□□□□ -1.06
PHF3-209ENST00000509330 EPPK1P58107 5090 aaKnown RBP8.41□□□□□ -1.06
PHF3-209ENST00000509330 PKHD1L1Q86WI1 4243 aa8.41□□□□□ -1.06
PHF3-209ENST00000509330 Q5XG85 94 aa8.4□□□□□ -1.06
PHF3-209ENST00000509330 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
PHF3-209ENST00000509330 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
PHF3-209ENST00000509330 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
PHF3-209ENST00000509330 Q5VSD8 79 aa8.38□□□□□ -1.07
PHF3-209ENST00000509330 RYR1P21817 5038 aa8.37□□□□□ -1.07
PHF3-209ENST00000509330 KRTAP17-1Q9BYP8 105 aa8.36□□□□□ -1.07
PHF3-209ENST00000509330 H3BPC8 53 aa8.35□□□□□ -1.07
PHF3-209ENST00000509330 C9orf92A6NGG3 77 aa8.35□□□□□ -1.07
PHF3-209ENST00000509330 MYCBP2O75592 4640 aa8.33□□□□□ -1.08
PHF3-209ENST00000509330 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
PHF3-209ENST00000509330 MPLKIPQ8TAP9 179 aa8.32□□□□□ -1.08
PHF3-209ENST00000509330 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
PHF3-209ENST00000509330 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
PHF3-209ENST00000509330 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
PHF3-209ENST00000509330 Q8N9P0 234 aaPredicted RBP8.3□□□□□ -1.08
PHF3-209ENST00000509330 FP248Q71RG6 208 aaPredicted RBP8.3□□□□□ -1.08
PHF3-209ENST00000509330 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
PHF3-209ENST00000509330 Q8N1X5 172 aa8.28□□□□□ -1.08
PHF3-209ENST00000509330 TNXBP22105 4242 aa8.27□□□□□ -1.09
PHF3-209ENST00000509330 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
PHF3-209ENST00000509330 IGKV2-30P06310 120 aa8.25□□□□□ -1.09
PHF3-209ENST00000509330 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
PHF3-209ENST00000509330 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
PHF3-209ENST00000509330 LOC101927531A0A1B0GV80 90 aa8.24□□□□□ -1.09
PHF3-209ENST00000509330 SPANXA2-OT1Q8N9U9 137 aa8.23□□□□□ -1.09
PHF3-209ENST00000509330 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
PHF3-209ENST00000509330 IGLV7-46A0A075B6I9 117 aa8.22□□□□□ -1.09
PHF3-209ENST00000509330 FAT3Q8TDW7 4589 aa8.21□□□□□ -1.1
PHF3-209ENST00000509330 COA5Q86WW8 74 aa8.18□□□□□ -1.1
PHF3-209ENST00000509330 HRES1P13985 223 aa8.17□□□□□ -1.1
PHF3-209ENST00000509330 KRTAP10-8P60410 259 aa8.14□□□□□ -1.11
PHF3-209ENST00000509330 PSPHP1O15172 72 aa8.11□□□□□ -1.11
PHF3-209ENST00000509330 KRTAP4-5Q9BYR2 181 aa8.07□□□□□ -1.12
PHF3-209ENST00000509330 A8MUU9 505 aa8.03□□□□□ -1.12
PHF3-209ENST00000509330 MT1HL1P0DM35 61 aa8.03□□□□□ -1.12
PHF3-209ENST00000509330 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
PHF3-209ENST00000509330 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
PHF3-209ENST00000509330 A8MUN3 132 aa8.02□□□□□ -1.13
PHF3-209ENST00000509330 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
PHF3-209ENST00000509330 ACYP2P14621 99 aa8□□□□□ -1.13
PHF3-209ENST00000509330 Q1T7F1 81 aa8□□□□□ -1.13
PHF3-209ENST00000509330 CHKB-CPT1BH3BT56 60 aa7.99□□□□□ -1.13
PHF3-209ENST00000509330 DMAC1Q96GE9 116 aa7.99□□□□□ -1.13
PHF3-209ENST00000509330 PRR15LQ9BU68 103 aa7.98□□□□□ -1.13
PHF3-209ENST00000509330 BRK1Q8WUW1 75 aa7.95□□□□□ -1.14
PHF3-209ENST00000509330 SPINK7P58062 85 aa7.95□□□□□ -1.14
PHF3-209ENST00000509330 LPAP08519 4548 aa7.93□□□□□ -1.14
PHF3-209ENST00000509330 Q75L30 129 aa7.91□□□□□ -1.14
PHF3-209ENST00000509330 XP32Q5T750 250 aa7.9□□□□□ -1.14
PHF3-209ENST00000509330 ATP11AUNQ6ZP68 121 aa7.9□□□□□ -1.15
PHF3-209ENST00000509330 Q5VV11 94 aa7.89□□□□□ -1.15
PHF3-209ENST00000509330 LRP2P98164 4655 aa7.89□□□□□ -1.15
PHF3-209ENST00000509330 V9GYY9 64 aa7.89□□□□□ -1.15
PHF3-209ENST00000509330 HERC2O95714 4834 aa7.87□□□□□ -1.15
PHF3-209ENST00000509330 A8MU10 97 aa7.84□□□□□ -1.15
PHF3-209ENST00000509330 RPL37P61927 97 aaKnown RBP7.83□□□□□ -1.16
PHF3-209ENST00000509330 KRTAP3-1Q9BYR8 98 aa7.82□□□□□ -1.16
PHF3-209ENST00000509330 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
PHF3-209ENST00000509330 A6NED7 52 aa7.78□□□□□ -1.16
PHF3-209ENST00000509330 BIRC6Q9NR09 4857 aa7.77□□□□□ -1.17
PHF3-209ENST00000509330 J3QL48 77 aa7.76□□□□□ -1.17
PHF3-209ENST00000509330 PRO0628Q9UI54 55 aa7.73□□□□□ -1.17
PHF3-209ENST00000509330 A0A1B0GU69 56 aa7.72□□□□□ -1.17
PHF3-209ENST00000509330 COX6B2Q6YFQ2 88 aa7.7□□□□□ -1.18
PHF3-209ENST00000509330 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
PHF3-209ENST00000509330 LCA10Q71F78 164 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms