RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 C9orf92A6NGG3 77 aa-0.15□□□□□ -2.43
PAPD4-212ENST00000509227 KALRNO60229 2985 aa-0.15□□□□□ -2.43
PAPD4-212ENST00000509227 S100ZQ8WXG8 99 aa-0.15□□□□□ -2.43
PAPD4-212ENST00000509227 SPRR2FQ96RM1 72 aa-0.15□□□□□ -2.43
PAPD4-212ENST00000509227 MACF1Q9UPN3 7388 aaKnown RBP-0.15□□□□□ -2.43
PAPD4-212ENST00000509227 ITSN2Q9NZM3 1697 aa-0.15□□□□□ -2.43
PAPD4-212ENST00000509227 THOC2Q8NI27 1593 aaKnown RBP-0.15□□□□□ -2.43
PAPD4-212ENST00000509227 FAT1Q14517 4588 aa-0.16□□□□□ -2.43
PAPD4-212ENST00000509227 STARD9Q9P2P6 4700 aa-0.16□□□□□ -2.43
PAPD4-212ENST00000509227 ZZEF1O43149 2961 aa-0.16□□□□□ -2.43
PAPD4-212ENST00000509227 FCER1GP30273 86 aa-0.16□□□□□ -2.44
PAPD4-212ENST00000509227 DNAH11Q96DT5 4516 aa-0.16□□□□□ -2.44
PAPD4-212ENST00000509227 SETD2Q9BYW2 2564 aaPredicted RBP-0.16□□□□□ -2.44
PAPD4-212ENST00000509227 DNAH3Q8TD57 4116 aa-0.16□□□□□ -2.44
PAPD4-212ENST00000509227 NBEAL1Q6ZS30 2694 aa-0.17□□□□□ -2.44
PAPD4-212ENST00000509227 DNAH2Q9P225 4427 aa-0.17□□□□□ -2.44
PAPD4-212ENST00000509227 CLASP1Q7Z460 1538 aa-0.17□□□□□ -2.44
PAPD4-212ENST00000509227 C3P01024 1663 aa-0.17□□□□□ -2.44
PAPD4-212ENST00000509227 RELNP78509 3460 aa-0.17□□□□□ -2.44
PAPD4-212ENST00000509227 IGLV5-48A0A075B6I7 105 aa-0.17□□□□□ -2.44
PAPD4-212ENST00000509227 A0A0C4DFX4 3053 aa-0.17□□□□□ -2.44
PAPD4-212ENST00000509227 SPTBN4Q9H254 2564 aa-0.18□□□□□ -2.44
PAPD4-212ENST00000509227 UBR4Q5T4S7 5183 aa-0.18□□□□□ -2.44
PAPD4-212ENST00000509227 LINC00308Q8TCZ7 52 aa-0.18□□□□□ -2.44
PAPD4-212ENST00000509227 NMES1Q9C002 83 aa-0.18□□□□□ -2.44
PAPD4-212ENST00000509227 NBASA2RRP1 2371 aa-0.18□□□□□ -2.44
PAPD4-212ENST00000509227 DMXL1Q9Y485 3027 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 EEA1Q15075 1411 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 MUC17Q685J3 4493 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 KRTAP19-8Q3LI54 63 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 KIF1AQ12756 1690 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 CPS1P31327 1500 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 ERICH3Q5RHP9 1530 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 USH2AO75445 5202 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 MXRA5Q9NR99 2828 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 TIAM1Q13009 1591 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 CREBBPQ92793 2442 aa-0.19□□□□□ -2.44
PAPD4-212ENST00000509227 CCDC180Q9P1Z9 1646 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 LAMA1P25391 3075 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 TOGARAM1Q9Y4F4 1720 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 KRTAP19-5Q3LI72 72 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 SMIM5Q71RC9 77 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 SPTBN5Q9NRC6 3674 aaKnown RBP-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 SRCAPQ6ZRS2 3230 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 UGGT1Q9NYU2 1555 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 STAB2Q8WWQ8 2551 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 LAMA2P24043 3122 aaKnown RBP-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 TACC2O95359 2948 aa-0.2□□□□□ -2.44
PAPD4-212ENST00000509227 ALS2Q96Q42 1657 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 BPTFQ12830 3046 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 AGLP35573 1532 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 DNAH1Q9P2D7 4330 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 H3BUA1 57 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 SERF2P84101 59 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 DEFB110Q30KQ9 67 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 KRTAP20-2Q3LI61 65 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 DNAH8Q96JB1 4490 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 PKD1L2Q7Z442 2459 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 TRIOO75962 3097 aa-0.21□□□□□ -2.44
PAPD4-212ENST00000509227 PRXQ9BXM0 1461 aa-0.22□□□□□ -2.44
PAPD4-212ENST00000509227 ABCA10Q8WWZ4 1543 aa-0.22□□□□□ -2.44
PAPD4-212ENST00000509227 TMEM167BQ9NRX6 74 aa-0.22□□□□□ -2.44
PAPD4-212ENST00000509227 CROCC2H7BZ55 1655 aa-0.22□□□□□ -2.44
PAPD4-212ENST00000509227 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.22□□□□□ -2.44
PAPD4-212ENST00000509227 LY75O60449 1722 aa-0.22□□□□□ -2.44
PAPD4-212ENST00000509227 SPENQ96T58 3664 aaKnown RBP-0.22□□□□□ -2.44
PAPD4-212ENST00000509227 FASNP49327 2511 aaKnown RBP-0.23□□□□□ -2.45
PAPD4-212ENST00000509227 ANKRD36CQ5JPF3 1778 aa-0.23□□□□□ -2.45
PAPD4-212ENST00000509227 MMP24-AS1A0A0U1RRL7 71 aa-0.23□□□□□ -2.45
PAPD4-212ENST00000509227 H0YGX0 51 aa-0.23□□□□□ -2.45
PAPD4-212ENST00000509227 KAAG1Q9UBP8 84 aa-0.23□□□□□ -2.45
PAPD4-212ENST00000509227 GCN1Q92616 2671 aaKnown RBP-0.23□□□□□ -2.45
PAPD4-212ENST00000509227 PLECQ15149 4684 aaKnown RBP-0.24□□□□□ -2.45
PAPD4-212ENST00000509227 LAMA3Q16787 3333 aa-0.24□□□□□ -2.45
PAPD4-212ENST00000509227 SMR3BP02814 79 aaPredicted RBP-0.24□□□□□ -2.45
PAPD4-212ENST00000509227 NOP10Q9NPE3 64 aaKnown RBP-0.24□□□□□ -2.45
PAPD4-212ENST00000509227 RANBP2P49792 3224 aaKnown RBP-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 EPPK1P58107 5090 aaKnown RBP-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 EPG5Q9HCE0 2579 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 TEP1Q99973 2627 aaKnown RBP-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 ANKRD11Q6UB99 2663 aaPredicted RBP-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 HIVEP1P15822 2718 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 TFF3Q07654 80 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 KRTAP8-1Q8IUC2 63 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 EFCAB6Q5THR3 1501 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 MAST1Q9Y2H9 1570 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 CDC42BPAQ5VT25 1732 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 DYNC1H1Q14204 4646 aaKnown RBP-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 HERC2O95714 4834 aa-0.25□□□□□ -2.45
PAPD4-212ENST00000509227 CEP290O15078 2479 aa-0.26□□□□□ -2.45
PAPD4-212ENST00000509227 SPG11Q96JI7 2443 aa-0.26□□□□□ -2.45
PAPD4-212ENST00000509227 SMIM27A0A1W2PRY6 76 aa-0.26□□□□□ -2.45
PAPD4-212ENST00000509227 TNP1P09430 55 aa-0.26□□□□□ -2.45
PAPD4-212ENST00000509227 MT4P47944 62 aa-0.26□□□□□ -2.45
PAPD4-212ENST00000509227 WFDC10BQ8IUB3 73 aa-0.26□□□□□ -2.45
PAPD4-212ENST00000509227 MTORP42345 2549 aa-0.26□□□□□ -2.45
PAPD4-212ENST00000509227 RYR1P21817 5038 aa-0.27□□□□□ -2.45
PAPD4-212ENST00000509227 ITPR3Q14573 2671 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms