RNA–Protein interactions for RNA: ENST00000509227.1

PAPD4-212, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 4

Gene PAPD4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-212ENST00000509227 AEBP2Q6ZN18 517 aaPredicted RBP30.85■■■□□ 2.53
PAPD4-212ENST00000509227 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
PAPD4-212ENST00000509227 SENP3Q9H4L4 574 aaPredicted RBP26.47■■□□□ 1.83
PAPD4-212ENST00000509227 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
PAPD4-212ENST00000509227 FOXD1Q16676 465 aa24.73■■□□□ 1.55
PAPD4-212ENST00000509227 POTEDQ86YR6 584 aa24.02■■□□□ 1.44
PAPD4-212ENST00000509227 MSH5O43196 834 aa23.45■■□□□ 1.34
PAPD4-212ENST00000509227 PIAS4Q8N2W9 510 aaPredicted RBP22.93■■□□□ 1.26
PAPD4-212ENST00000509227 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
PAPD4-212ENST00000509227 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
PAPD4-212ENST00000509227 ADRA2BP18089 450 aa22.45■■□□□ 1.18
PAPD4-212ENST00000509227 DMRT2Q9Y5R5 561 aa20.88■□□□□ 0.93
PAPD4-212ENST00000509227 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
PAPD4-212ENST00000509227 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
PAPD4-212ENST00000509227 CACNB1Q02641 598 aaPredicted RBP20.5■□□□□ 0.87
PAPD4-212ENST00000509227 DCAF8L1A6NGE4 600 aa19.98■□□□□ 0.79
PAPD4-212ENST00000509227 RNF39Q9H2S5 420 aa19.93■□□□□ 0.78
PAPD4-212ENST00000509227 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
PAPD4-212ENST00000509227 PPP4R3CPQ6ZMV5 832 aa19.69■□□□□ 0.74
PAPD4-212ENST00000509227 C1QBPQ07021 282 aaKnown RBP19.62■□□□□ 0.73
PAPD4-212ENST00000509227 RNF216Q9NWF9 866 aaPredicted RBP19.52■□□□□ 0.72
PAPD4-212ENST00000509227 CNKSR2Q8WXI2 1034 aa19.51■□□□□ 0.71
PAPD4-212ENST00000509227 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
PAPD4-212ENST00000509227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.61
PAPD4-212ENST00000509227 NCBP3Q53F19 620 aaKnown RBP18.75■□□□□ 0.59
PAPD4-212ENST00000509227 POTEHQ6S545 545 aa18.7■□□□□ 0.58
PAPD4-212ENST00000509227 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
PAPD4-212ENST00000509227 DSG3P32926 999 aa18.42■□□□□ 0.54
PAPD4-212ENST00000509227 U3KPZ7 1027 aaPredicted RBP18.41■□□□□ 0.54
PAPD4-212ENST00000509227 CAPN15O75808 1086 aa18.33■□□□□ 0.52
PAPD4-212ENST00000509227 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
PAPD4-212ENST00000509227 APLP2Q06481 763 aa17.87■□□□□ 0.45
PAPD4-212ENST00000509227 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
PAPD4-212ENST00000509227 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
PAPD4-212ENST00000509227 ABCB7O75027 752 aa17.83■□□□□ 0.44
PAPD4-212ENST00000509227 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
PAPD4-212ENST00000509227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
PAPD4-212ENST00000509227 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
PAPD4-212ENST00000509227 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
PAPD4-212ENST00000509227 SAMD1Q6SPF0 538 aaPredicted RBP17.54■□□□□ 0.4
PAPD4-212ENST00000509227 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
PAPD4-212ENST00000509227 KCNA4P22459 653 aa17.47■□□□□ 0.39
PAPD4-212ENST00000509227 POLA2Q14181 598 aa17.25■□□□□ 0.35
PAPD4-212ENST00000509227 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
PAPD4-212ENST00000509227 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
PAPD4-212ENST00000509227 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
PAPD4-212ENST00000509227 PIP4P2Q8N4L2 257 aa16.91■□□□□ 0.3
PAPD4-212ENST00000509227 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
PAPD4-212ENST00000509227 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
PAPD4-212ENST00000509227 HAX1O00165 279 aa16.78■□□□□ 0.28
PAPD4-212ENST00000509227 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
PAPD4-212ENST00000509227 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
PAPD4-212ENST00000509227 PITPNM1O00562 1244 aa16.7■□□□□ 0.26
PAPD4-212ENST00000509227 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
PAPD4-212ENST00000509227 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
PAPD4-212ENST00000509227 EVX2Q03828 476 aa16.51■□□□□ 0.23
PAPD4-212ENST00000509227 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
PAPD4-212ENST00000509227 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
PAPD4-212ENST00000509227 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
PAPD4-212ENST00000509227 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
PAPD4-212ENST00000509227 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
PAPD4-212ENST00000509227 C19orf67A6NJJ6 358 aa16.21■□□□□ 0.19
PAPD4-212ENST00000509227 SPDYE1Q8NFV5 336 aaPredicted RBP16.18■□□□□ 0.18
PAPD4-212ENST00000509227 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
PAPD4-212ENST00000509227 FBLN2P98095 1184 aa16.15■□□□□ 0.18
PAPD4-212ENST00000509227 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
PAPD4-212ENST00000509227 GABBR2O75899 941 aa16.12■□□□□ 0.17
PAPD4-212ENST00000509227 LHX8Q68G74 356 aa16.12■□□□□ 0.17
PAPD4-212ENST00000509227 ZBTB22O15209 634 aa16.04■□□□□ 0.16
PAPD4-212ENST00000509227 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
PAPD4-212ENST00000509227 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
PAPD4-212ENST00000509227 MKRN4PQ13434 485 aaPredicted RBP15.94■□□□□ 0.14
PAPD4-212ENST00000509227 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
PAPD4-212ENST00000509227 PRR29P0C7W0 189 aa15.8■□□□□ 0.12
PAPD4-212ENST00000509227 POTEIP0CG38 1075 aa15.77■□□□□ 0.12
PAPD4-212ENST00000509227 CLCN6P51797 869 aa15.71■□□□□ 0.11
PAPD4-212ENST00000509227 CD44P16070 742 aaKnown RBP15.7■□□□□ 0.1
PAPD4-212ENST00000509227 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
PAPD4-212ENST00000509227 FARP1Q9Y4F1 1045 aaPredicted RBP15.64■□□□□ 0.09
PAPD4-212ENST00000509227 PLSCR2Q9NRY7 297 aa15.62■□□□□ 0.09
PAPD4-212ENST00000509227 DCBLD2Q96PD2 775 aa15.54■□□□□ 0.08
PAPD4-212ENST00000509227 ZNF579Q8NAF0 562 aaKnown RBP15.46■□□□□ 0.07
PAPD4-212ENST00000509227 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
PAPD4-212ENST00000509227 OTUD5Q96G74 571 aa15.33■□□□□ 0.04
PAPD4-212ENST00000509227 GALR2O43603 387 aaPredicted RBP15.28■□□□□ 0.04
PAPD4-212ENST00000509227 CREBZFQ9NS37 354 aa15.25■□□□□ 0.03
PAPD4-212ENST00000509227 POTEB2H3BUK9 544 aa15.23■□□□□ 0.03
PAPD4-212ENST00000509227 POTEMA6NI47 508 aa15.2■□□□□ 0.02
PAPD4-212ENST00000509227 STAG3Q9UJ98 1225 aa15.17■□□□□ 0.02
PAPD4-212ENST00000509227 POTEGQ6S5H5 508 aa15.14■□□□□ 0.01
PAPD4-212ENST00000509227 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
PAPD4-212ENST00000509227 PHF12Q96QT6 1004 aa15.08■□□□□ 0
PAPD4-212ENST00000509227 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
PAPD4-212ENST00000509227 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
PAPD4-212ENST00000509227 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
PAPD4-212ENST00000509227 ASTLQ6HA08 431 aaPredicted RBP14.96□□□□□ -0.01
PAPD4-212ENST00000509227 METRNQ9UJH8 293 aa14.95□□□□□ -0.02
PAPD4-212ENST00000509227 SLC39A7Q92504 469 aa14.93□□□□□ -0.02
PAPD4-212ENST00000509227 C7P10643 843 aa14.92□□□□□ -0.02
PAPD4-212ENST00000509227 MNX1P50219 401 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms