RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 DEFB116Q30KQ4 102 aa11.69□□□□□ -0.54
RETREG1-204ENST00000509048 NOTCH2NLQ7Z3S9 236 aa11.69□□□□□ -0.54
RETREG1-204ENST00000509048 SPCS1Q9Y6A9 102 aa11.64□□□□□ -0.55
RETREG1-204ENST00000509048 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
RETREG1-204ENST00000509048 RBM3P98179 157 aaKnown RBP11.63□□□□□ -0.55
RETREG1-204ENST00000509048 IGHV6-1A0A0B4J1U7 121 aa11.62□□□□□ -0.55
RETREG1-204ENST00000509048 C9JAW5 83 aa11.6□□□□□ -0.55
RETREG1-204ENST00000509048 DSCR8Q96T75 97 aa11.6□□□□□ -0.55
RETREG1-204ENST00000509048 VPS25Q9BRG1 176 aa11.6□□□□□ -0.55
RETREG1-204ENST00000509048 KRTAP9-8Q9BYQ0 159 aa11.58□□□□□ -0.56
RETREG1-204ENST00000509048 A0A1B0GVX0 72 aa11.57□□□□□ -0.56
RETREG1-204ENST00000509048 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
RETREG1-204ENST00000509048 C8orf87E5RJ46 101 aa11.56□□□□□ -0.56
RETREG1-204ENST00000509048 GTF2H5Q6ZYL4 71 aa11.55□□□□□ -0.56
RETREG1-204ENST00000509048 K7EP34 96 aa11.54□□□□□ -0.56
RETREG1-204ENST00000509048 HRES1P13985 223 aa11.54□□□□□ -0.56
RETREG1-204ENST00000509048 H3BT86 120 aa11.53□□□□□ -0.56
RETREG1-204ENST00000509048 C21orf62-AS1Q17RA5 79 aa11.53□□□□□ -0.56
RETREG1-204ENST00000509048 FAM236DA0A1B0GTK5 79 aa11.5□□□□□ -0.57
RETREG1-204ENST00000509048 JMJD7-PLA2G4BH0Y9G9 81 aa11.5□□□□□ -0.57
RETREG1-204ENST00000509048 J3KT08 172 aa11.5□□□□□ -0.57
RETREG1-204ENST00000509048 FAM236CP0DP71 79 aa11.5□□□□□ -0.57
RETREG1-204ENST00000509048 Q6ZQT0 140 aa11.5□□□□□ -0.57
RETREG1-204ENST00000509048 RBM12B-AS1Q9P1G2 102 aa11.49□□□□□ -0.57
RETREG1-204ENST00000509048 USH2AO75445 5202 aa11.47□□□□□ -0.57
RETREG1-204ENST00000509048 MTURNQ8N3F0 131 aa11.45□□□□□ -0.58
RETREG1-204ENST00000509048 ZCCHC13Q8WW36 166 aaKnown RBP11.42□□□□□ -0.58
RETREG1-204ENST00000509048 LOC110117498A0A087WWA1 95 aa11.41□□□□□ -0.58
RETREG1-204ENST00000509048 A0A1B0GW54 56 aa11.4□□□□□ -0.58
RETREG1-204ENST00000509048 PDE6GP18545 87 aa11.4□□□□□ -0.58
RETREG1-204ENST00000509048 MT2AP02795 61 aa11.39□□□□□ -0.59
RETREG1-204ENST00000509048 F8W1H4 67 aa11.38□□□□□ -0.59
RETREG1-204ENST00000509048 NDUFB1O75438 58 aa11.38□□□□□ -0.59
RETREG1-204ENST00000509048 Q8N9P0 234 aaPredicted RBP11.38□□□□□ -0.59
RETREG1-204ENST00000509048 PRO0461Q9UI25 63 aa11.38□□□□□ -0.59
RETREG1-204ENST00000509048 SSPOA2VEC9 5147 aa11.38□□□□□ -0.59
RETREG1-204ENST00000509048 KRTAP9-7A8MTY7 169 aa11.36□□□□□ -0.59
RETREG1-204ENST00000509048 SMCPP49901 116 aaPredicted RBP11.35□□□□□ -0.59
RETREG1-204ENST00000509048 C14orf132Q9NPU4 83 aa11.35□□□□□ -0.59
RETREG1-204ENST00000509048 A8MWP4 228 aa11.34□□□□□ -0.59
RETREG1-204ENST00000509048 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.34□□□□□ -0.59
RETREG1-204ENST00000509048 SPINK7P58062 85 aa11.33□□□□□ -0.6
RETREG1-204ENST00000509048 C8orf17Q9NRJ1 99 aa11.33□□□□□ -0.6
RETREG1-204ENST00000509048 IGKV3D-7A0A0C4DH55 119 aa11.3□□□□□ -0.6
RETREG1-204ENST00000509048 A0A1B0GV90 55 aa11.3□□□□□ -0.6
RETREG1-204ENST00000509048 MT1FP04733 61 aa11.3□□□□□ -0.6
RETREG1-204ENST00000509048 Q6ZVQ6 151 aa11.24□□□□□ -0.61
RETREG1-204ENST00000509048 PRR15Q8IV56 129 aa11.23□□□□□ -0.61
RETREG1-204ENST00000509048 KRTAP10-10P60014 251 aa11.22□□□□□ -0.61
RETREG1-204ENST00000509048 NREPQ16612 68 aa11.22□□□□□ -0.61
RETREG1-204ENST00000509048 KRTAP9-3Q9BYQ3 159 aa11.22□□□□□ -0.61
RETREG1-204ENST00000509048 ETDBQ3ZM63 59 aa11.21□□□□□ -0.61
RETREG1-204ENST00000509048 LCE2BO14633 110 aa11.19□□□□□ -0.62
RETREG1-204ENST00000509048 WFDC13Q8IUB5 93 aa11.17□□□□□ -0.62
RETREG1-204ENST00000509048 MMP24-AS1A0A0U1RRL7 71 aa11.16□□□□□ -0.62
RETREG1-204ENST00000509048 FCGBPQ9Y6R7 5405 aaPredicted RBP11.15□□□□□ -0.62
RETREG1-204ENST00000509048 TMEM254Q8TBM7 123 aa11.14□□□□□ -0.63
RETREG1-204ENST00000509048 MRPL34Q9BQ48 92 aaKnown RBP11.13□□□□□ -0.63
RETREG1-204ENST00000509048 K7EQZ3 153 aa11.09□□□□□ -0.63
RETREG1-204ENST00000509048 hDV103S1A0JD37 113 aa11.07□□□□□ -0.64
RETREG1-204ENST00000509048 KRTAP19-1Q8IUB9 90 aa11.04□□□□□ -0.64
RETREG1-204ENST00000509048 UBL5Q9BZL1 73 aa11.02□□□□□ -0.65
RETREG1-204ENST00000509048 BPY2O14599 106 aa11□□□□□ -0.65
RETREG1-204ENST00000509048 NDUFS5O43920 106 aa11□□□□□ -0.65
RETREG1-204ENST00000509048 ACYP1P07311 99 aa10.99□□□□□ -0.65
RETREG1-204ENST00000509048 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
RETREG1-204ENST00000509048 FAM240AA0A1B0GVK7 77 aa10.95□□□□□ -0.66
RETREG1-204ENST00000509048 H1FX-AS1Q4G0G2 97 aa10.95□□□□□ -0.66
RETREG1-204ENST00000509048 J3QR89 54 aa10.93□□□□□ -0.66
RETREG1-204ENST00000509048 Q5W150 140 aa10.92□□□□□ -0.66
RETREG1-204ENST00000509048 IGKV2D-30A0A075B6S6 120 aa10.9□□□□□ -0.66
RETREG1-204ENST00000509048 IGKV2-30P06310 120 aa10.9□□□□□ -0.66
RETREG1-204ENST00000509048 Q8N9L7 120 aa10.9□□□□□ -0.66
RETREG1-204ENST00000509048 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
RETREG1-204ENST00000509048 CASC2Q6XLA1 102 aa10.87□□□□□ -0.67
RETREG1-204ENST00000509048 MACF1Q9UPN3 7388 aaKnown RBP10.86□□□□□ -0.67
RETREG1-204ENST00000509048 HCG22E2RYF7 251 aa10.83□□□□□ -0.68
RETREG1-204ENST00000509048 KRTAP19-6Q3LI70 58 aa10.83□□□□□ -0.68
RETREG1-204ENST00000509048 CXCL6P80162 114 aa10.8□□□□□ -0.68
RETREG1-204ENST00000509048 SYNE2Q8WXH0 6885 aaKnown RBP10.79□□□□□ -0.68
RETREG1-204ENST00000509048 ATP5EP2Q5VTU8 51 aa10.77□□□□□ -0.69
RETREG1-204ENST00000509048 K7ERU9 68 aa10.74□□□□□ -0.69
RETREG1-204ENST00000509048 C4orf26Q17RF5 130 aa10.73□□□□□ -0.69
RETREG1-204ENST00000509048 LINC00643Q86TS7 51 aa10.73□□□□□ -0.69
RETREG1-204ENST00000509048 HIST1H4AP62805 103 aaKnown RBP10.61□□□□□ -0.71
RETREG1-204ENST00000509048 KRTAP3-1Q9BYR8 98 aa10.61□□□□□ -0.71
RETREG1-204ENST00000509048 C5orf47Q569G3 176 aa10.56□□□□□ -0.72
RETREG1-204ENST00000509048 TP53AIP1Q9HCN2 124 aa10.54□□□□□ -0.72
RETREG1-204ENST00000509048 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.73
RETREG1-204ENST00000509048 S4R3F8 94 aa10.52□□□□□ -0.73
RETREG1-204ENST00000509048 CSAG1Q6PB30 78 aa10.46□□□□□ -0.73
RETREG1-204ENST00000509048 LCA10Q71F78 164 aa10.46□□□□□ -0.73
RETREG1-204ENST00000509048 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
RETREG1-204ENST00000509048 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
RETREG1-204ENST00000509048 A0A087WVE0 104 aa10.44□□□□□ -0.74
RETREG1-204ENST00000509048 IMUPQ9GZP8 106 aa10.43□□□□□ -0.74
RETREG1-204ENST00000509048 MT-ATP8P03928 68 aa10.39□□□□□ -0.75
RETREG1-204ENST00000509048 KRTAP6-3Q3LI67 103 aa10.38□□□□□ -0.75
RETREG1-204ENST00000509048 SPRR2GQ9BYE4 73 aa10.36□□□□□ -0.75
RETREG1-204ENST00000509048 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms