RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 ATP5EP2Q5VTU8 51 aa6.17□□□□□ -1.42
POLR2J3-214ENST00000508910 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
POLR2J3-214ENST00000508910 IGKV4-1P06312 121 aa6.16□□□□□ -1.42
POLR2J3-214ENST00000508910 DEFB116Q30KQ4 102 aa6.16□□□□□ -1.42
POLR2J3-214ENST00000508910 LINC00643Q86TS7 51 aa6.16□□□□□ -1.42
POLR2J3-214ENST00000508910 SIGMAR1Q99720 223 aa6.16□□□□□ -1.42
POLR2J3-214ENST00000508910 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
POLR2J3-214ENST00000508910 CXCL6P80162 114 aa6.14□□□□□ -1.43
POLR2J3-214ENST00000508910 FP248Q71RG6 208 aaPredicted RBP6.13□□□□□ -1.43
POLR2J3-214ENST00000508910 A8MWP4 228 aa6.12□□□□□ -1.43
POLR2J3-214ENST00000508910 IGKV3D-7A0A0C4DH55 119 aa6.11□□□□□ -1.43
POLR2J3-214ENST00000508910 NDUFB1O75438 58 aa6.11□□□□□ -1.43
POLR2J3-214ENST00000508910 DSCR10P59022 87 aa6.11□□□□□ -1.43
POLR2J3-214ENST00000508910 A0A1B0GVX0 72 aa6.09□□□□□ -1.43
POLR2J3-214ENST00000508910 K7EQZ3 153 aa6.09□□□□□ -1.43
POLR2J3-214ENST00000508910 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
POLR2J3-214ENST00000508910 IGLV7-46A0A075B6I9 117 aa6.07□□□□□ -1.44
POLR2J3-214ENST00000508910 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
POLR2J3-214ENST00000508910 PRR4Q16378 134 aa6.07□□□□□ -1.44
POLR2J3-214ENST00000508910 Q8N9L7 120 aa6.07□□□□□ -1.44
POLR2J3-214ENST00000508910 MT-ATP8P03928 68 aa6.06□□□□□ -1.44
POLR2J3-214ENST00000508910 HERC1Q15751 4861 aa6.06□□□□□ -1.44
POLR2J3-214ENST00000508910 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
POLR2J3-214ENST00000508910 HIST1H4AP62805 103 aaKnown RBP6.05□□□□□ -1.44
POLR2J3-214ENST00000508910 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
POLR2J3-214ENST00000508910 C8orf17Q9NRJ1 99 aa6.03□□□□□ -1.44
POLR2J3-214ENST00000508910 MMP24-AS1A0A0U1RRL7 71 aa6.02□□□□□ -1.45
POLR2J3-214ENST00000508910 LINC00313P59037 77 aa6.02□□□□□ -1.45
POLR2J3-214ENST00000508910 LCE3BQ5TA77 95 aa6.02□□□□□ -1.45
POLR2J3-214ENST00000508910 IMUPQ9GZP8 106 aa6.02□□□□□ -1.45
POLR2J3-214ENST00000508910 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
POLR2J3-214ENST00000508910 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
POLR2J3-214ENST00000508910 C9orf92A6NGG3 77 aa6□□□□□ -1.45
POLR2J3-214ENST00000508910 HCG22E2RYF7 251 aa6□□□□□ -1.45
POLR2J3-214ENST00000508910 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
POLR2J3-214ENST00000508910 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
POLR2J3-214ENST00000508910 A0A087WVE0 104 aa5.99□□□□□ -1.45
POLR2J3-214ENST00000508910 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
POLR2J3-214ENST00000508910 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
POLR2J3-214ENST00000508910 hDV103S1A0JD37 113 aa5.98□□□□□ -1.45
POLR2J3-214ENST00000508910 CASC2Q6XLA1 102 aa5.98□□□□□ -1.45
POLR2J3-214ENST00000508910 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
POLR2J3-214ENST00000508910 TMEM254Q8TBM7 123 aa5.98□□□□□ -1.45
POLR2J3-214ENST00000508910 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
POLR2J3-214ENST00000508910 MRPL34Q9BQ48 92 aaKnown RBP5.95□□□□□ -1.46
POLR2J3-214ENST00000508910 FAM236AA0A1B0GUQ0 79 aa5.92□□□□□ -1.46
POLR2J3-214ENST00000508910 FAM236BA0A1B0GV22 79 aa5.92□□□□□ -1.46
POLR2J3-214ENST00000508910 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
POLR2J3-214ENST00000508910 C20orf166-AS1Q96NR2 134 aa5.92□□□□□ -1.46
POLR2J3-214ENST00000508910 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
POLR2J3-214ENST00000508910 A8MUU9 505 aa5.91□□□□□ -1.46
POLR2J3-214ENST00000508910 LPAP08519 4548 aa5.9□□□□□ -1.46
POLR2J3-214ENST00000508910 NDUFS5O43920 106 aa5.9□□□□□ -1.46
POLR2J3-214ENST00000508910 Q75L30 129 aa5.9□□□□□ -1.46
POLR2J3-214ENST00000508910 SCGB1A1P11684 91 aa5.88□□□□□ -1.47
POLR2J3-214ENST00000508910 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
POLR2J3-214ENST00000508910 LRP2P98164 4655 aa5.87□□□□□ -1.47
POLR2J3-214ENST00000508910 KRTAP19-1Q8IUB9 90 aa5.86□□□□□ -1.47
POLR2J3-214ENST00000508910 TP53AIP1Q9HCN2 124 aa5.86□□□□□ -1.47
POLR2J3-214ENST00000508910 ATOX1O00244 68 aa5.85□□□□□ -1.47
POLR2J3-214ENST00000508910 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
POLR2J3-214ENST00000508910 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
POLR2J3-214ENST00000508910 ATP11AUNQ6ZP68 121 aa5.83□□□□□ -1.48
POLR2J3-214ENST00000508910 ZCCHC13Q8WW36 166 aaKnown RBP5.83□□□□□ -1.48
POLR2J3-214ENST00000508910 UQCRQO14949 82 aa5.82□□□□□ -1.48
POLR2J3-214ENST00000508910 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
POLR2J3-214ENST00000508910 TRAV7A0A075B6U4 112 aa5.8□□□□□ -1.48
POLR2J3-214ENST00000508910 TRAV22A0A0B4J277 110 aa5.79□□□□□ -1.48
POLR2J3-214ENST00000508910 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
POLR2J3-214ENST00000508910 Q5W150 140 aa5.78□□□□□ -1.48
POLR2J3-214ENST00000508910 MUC17Q685J3 4493 aa5.78□□□□□ -1.48
POLR2J3-214ENST00000508910 H0Y9P7 68 aa5.76□□□□□ -1.49
POLR2J3-214ENST00000508910 SERP2Q8N6R1 65 aa5.76□□□□□ -1.49
POLR2J3-214ENST00000508910 MP68P56378 58 aa5.75□□□□□ -1.49
POLR2J3-214ENST00000508910 C5orf47Q569G3 176 aa5.75□□□□□ -1.49
POLR2J3-214ENST00000508910 ANAPC13Q9BS18 74 aa5.74□□□□□ -1.49
POLR2J3-214ENST00000508910 H3BPC8 53 aa5.72□□□□□ -1.49
POLR2J3-214ENST00000508910 LOC101927531A0A1B0GV80 90 aa5.71□□□□□ -1.5
POLR2J3-214ENST00000508910 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
POLR2J3-214ENST00000508910 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
POLR2J3-214ENST00000508910 IGKV2-30P06310 120 aa5.7□□□□□ -1.5
POLR2J3-214ENST00000508910 COX7CP15954 63 aa5.7□□□□□ -1.5
POLR2J3-214ENST00000508910 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
POLR2J3-214ENST00000508910 LINC00208Q96KT6 92 aa5.7□□□□□ -1.5
POLR2J3-214ENST00000508910 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
POLR2J3-214ENST00000508910 C1orf64Q8NEQ6 169 aa5.69□□□□□ -1.5
POLR2J3-214ENST00000508910 SPINK7P58062 85 aa5.68□□□□□ -1.5
POLR2J3-214ENST00000508910 A0A0U1RQV1 116 aa5.66□□□□□ -1.5
POLR2J3-214ENST00000508910 C20orf197Q8N268 126 aa5.66□□□□□ -1.5
POLR2J3-214ENST00000508910 CYP4F30PQ9H0H9 118 aa5.66□□□□□ -1.5
POLR2J3-214ENST00000508910 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
POLR2J3-214ENST00000508910 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
POLR2J3-214ENST00000508910 RNF213Q63HN8 5207 aa5.64□□□□□ -1.51
POLR2J3-214ENST00000508910 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
POLR2J3-214ENST00000508910 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
POLR2J3-214ENST00000508910 HRES1P13985 223 aa5.6□□□□□ -1.51
POLR2J3-214ENST00000508910 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
POLR2J3-214ENST00000508910 NDUFC1O43677 76 aa5.56□□□□□ -1.52
POLR2J3-214ENST00000508910 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
POLR2J3-214ENST00000508910 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms