RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 LINC00313P59037 77 aa5.21□□□□□ -1.58
UBE2D3-227ENST00000508818 HSD52Q0P140 79 aa5.21□□□□□ -1.58
UBE2D3-227ENST00000508818 TRBV7-4A0A0J9YYF1 115 aa5.2□□□□□ -1.58
UBE2D3-227ENST00000508818 K7ERJ3 54 aa5.19□□□□□ -1.58
UBE2D3-227ENST00000508818 TRACP01848 142 aa5.18□□□□□ -1.58
UBE2D3-227ENST00000508818 CCKP06307 115 aa5.18□□□□□ -1.58
UBE2D3-227ENST00000508818 SCGB1C2P0DMR2 95 aa5.18□□□□□ -1.58
UBE2D3-227ENST00000508818 DEFB116Q30KQ4 102 aa5.17□□□□□ -1.58
UBE2D3-227ENST00000508818 FAM236DA0A1B0GTK5 79 aa5.16□□□□□ -1.58
UBE2D3-227ENST00000508818 FAM236CP0DP71 79 aa5.16□□□□□ -1.58
UBE2D3-227ENST00000508818 VPS25Q9BRG1 176 aa5.16□□□□□ -1.58
UBE2D3-227ENST00000508818 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
UBE2D3-227ENST00000508818 IGHV6-1A0A0B4J1U7 121 aa5.15□□□□□ -1.59
UBE2D3-227ENST00000508818 UBE2V1Q13404 147 aa5.15□□□□□ -1.59
UBE2D3-227ENST00000508818 PYY3Q5JQD4 70 aa5.15□□□□□ -1.59
UBE2D3-227ENST00000508818 UQCR10Q9UDW1 63 aa5.15□□□□□ -1.59
UBE2D3-227ENST00000508818 RBM3P98179 157 aaKnown RBP5.14□□□□□ -1.59
UBE2D3-227ENST00000508818 LINC00472Q9H8W2 130 aa5.14□□□□□ -1.59
UBE2D3-227ENST00000508818 DSCR8Q96T75 97 aa5.13□□□□□ -1.59
UBE2D3-227ENST00000508818 RBM12B-AS1Q9P1G2 102 aa5.13□□□□□ -1.59
UBE2D3-227ENST00000508818 KRTAP16-1A8MUX0 517 aa5.12□□□□□ -1.59
UBE2D3-227ENST00000508818 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
UBE2D3-227ENST00000508818 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
UBE2D3-227ENST00000508818 C8orf87E5RJ46 101 aa5.1□□□□□ -1.59
UBE2D3-227ENST00000508818 BAALC-AS2P0C853 105 aa5.1□□□□□ -1.59
UBE2D3-227ENST00000508818 C21orf62-AS1Q17RA5 79 aa5.1□□□□□ -1.59
UBE2D3-227ENST00000508818 TMA7Q9Y2S6 64 aaKnown RBP5.1□□□□□ -1.59
UBE2D3-227ENST00000508818 A0A1B0GVX0 72 aa5.09□□□□□ -1.59
UBE2D3-227ENST00000508818 C9JAW5 83 aa5.09□□□□□ -1.59
UBE2D3-227ENST00000508818 J3KT08 172 aa5.08□□□□□ -1.6
UBE2D3-227ENST00000508818 NDUFB1O75438 58 aa5.07□□□□□ -1.6
UBE2D3-227ENST00000508818 MTURNQ8N3F0 131 aa5.07□□□□□ -1.6
UBE2D3-227ENST00000508818 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
UBE2D3-227ENST00000508818 HRES1P13985 223 aa5.05□□□□□ -1.6
UBE2D3-227ENST00000508818 LYRM7Q5U5X0 104 aa5.05□□□□□ -1.6
UBE2D3-227ENST00000508818 ATXN8Q156A1 80 aa5.04□□□□□ -1.6
UBE2D3-227ENST00000508818 Q6ZQT0 140 aa5.04□□□□□ -1.6
UBE2D3-227ENST00000508818 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
UBE2D3-227ENST00000508818 JMJD7-PLA2G4BH0Y9G9 81 aa5.03□□□□□ -1.6
UBE2D3-227ENST00000508818 M0R143 59 aa5.03□□□□□ -1.6
UBE2D3-227ENST00000508818 MPLKIPQ8TAP9 179 aa5.02□□□□□ -1.61
UBE2D3-227ENST00000508818 PDE6GP18545 87 aa5.01□□□□□ -1.61
UBE2D3-227ENST00000508818 SPINK7P58062 85 aa5.01□□□□□ -1.61
UBE2D3-227ENST00000508818 A0A1B0GW54 56 aa5□□□□□ -1.61
UBE2D3-227ENST00000508818 KRTAP10-10P60014 251 aa5□□□□□ -1.61
UBE2D3-227ENST00000508818 NAA38Q9BRA0 125 aaKnown RBP5□□□□□ -1.61
UBE2D3-227ENST00000508818 LOC110117498A0A087WWA1 95 aa4.99□□□□□ -1.61
UBE2D3-227ENST00000508818 A8MWP4 228 aa4.99□□□□□ -1.61
UBE2D3-227ENST00000508818 MT2AP02795 61 aa4.99□□□□□ -1.61
UBE2D3-227ENST00000508818 Q8N9P0 234 aaPredicted RBP4.98□□□□□ -1.61
UBE2D3-227ENST00000508818 C8orf17Q9NRJ1 99 aa4.98□□□□□ -1.61
UBE2D3-227ENST00000508818 NREPQ16612 68 aa4.97□□□□□ -1.61
UBE2D3-227ENST00000508818 C14orf132Q9NPU4 83 aa4.97□□□□□ -1.61
UBE2D3-227ENST00000508818 IGKV3D-7A0A0C4DH55 119 aa4.95□□□□□ -1.62
UBE2D3-227ENST00000508818 MT1FP04733 61 aa4.95□□□□□ -1.62
UBE2D3-227ENST00000508818 Q6ZVQ6 151 aa4.95□□□□□ -1.62
UBE2D3-227ENST00000508818 USH2AO75445 5202 aa4.94□□□□□ -1.62
UBE2D3-227ENST00000508818 WFDC13Q8IUB5 93 aa4.94□□□□□ -1.62
UBE2D3-227ENST00000508818 BATFQ16520 125 aa4.93□□□□□ -1.62
UBE2D3-227ENST00000508818 PRR15Q8IV56 129 aa4.93□□□□□ -1.62
UBE2D3-227ENST00000508818 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
UBE2D3-227ENST00000508818 NDUFS5O43920 106 aa4.91□□□□□ -1.62
UBE2D3-227ENST00000508818 MRPL34Q9BQ48 92 aaKnown RBP4.91□□□□□ -1.62
UBE2D3-227ENST00000508818 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
UBE2D3-227ENST00000508818 TSTD3H0UI37 97 aa4.9□□□□□ -1.63
UBE2D3-227ENST00000508818 SMIM6P0DI80 62 aa4.9□□□□□ -1.63
UBE2D3-227ENST00000508818 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
UBE2D3-227ENST00000508818 hDV103S1A0JD37 113 aa4.88□□□□□ -1.63
UBE2D3-227ENST00000508818 LINC00846Q9NV44 126 aa4.88□□□□□ -1.63
UBE2D3-227ENST00000508818 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
UBE2D3-227ENST00000508818 BPY2O14599 106 aa4.87□□□□□ -1.63
UBE2D3-227ENST00000508818 H3BT86 120 aa4.86□□□□□ -1.63
UBE2D3-227ENST00000508818 K7EQZ3 153 aa4.86□□□□□ -1.63
UBE2D3-227ENST00000508818 H1FX-AS1Q4G0G2 97 aa4.85□□□□□ -1.63
UBE2D3-227ENST00000508818 IGKV2D-30A0A075B6S6 120 aa4.84□□□□□ -1.63
UBE2D3-227ENST00000508818 IGKV2-30P06310 120 aa4.84□□□□□ -1.63
UBE2D3-227ENST00000508818 A0A1W2PPM0 123 aa4.83□□□□□ -1.64
UBE2D3-227ENST00000508818 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
UBE2D3-227ENST00000508818 FCGBPQ9Y6R7 5405 aaPredicted RBP4.81□□□□□ -1.64
UBE2D3-227ENST00000508818 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
UBE2D3-227ENST00000508818 TAX1BP3O14907 124 aa4.8□□□□□ -1.64
UBE2D3-227ENST00000508818 CASC2Q6XLA1 102 aa4.8□□□□□ -1.64
UBE2D3-227ENST00000508818 HCG22E2RYF7 251 aa4.78□□□□□ -1.64
UBE2D3-227ENST00000508818 Q5W150 140 aa4.78□□□□□ -1.64
UBE2D3-227ENST00000508818 Q8N9L7 120 aa4.78□□□□□ -1.64
UBE2D3-227ENST00000508818 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
UBE2D3-227ENST00000508818 CXCL6P80162 114 aa4.76□□□□□ -1.65
UBE2D3-227ENST00000508818 KRTAP19-6Q3LI70 58 aa4.75□□□□□ -1.65
UBE2D3-227ENST00000508818 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
UBE2D3-227ENST00000508818 C4orf26Q17RF5 130 aa4.74□□□□□ -1.65
UBE2D3-227ENST00000508818 LOC105371267A0A1B0GV96 52 aa4.71□□□□□ -1.66
UBE2D3-227ENST00000508818 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-227ENST00000508818 FAM236AA0A1B0GUQ0 79 aa4.69□□□□□ -1.66
UBE2D3-227ENST00000508818 FAM236BA0A1B0GV22 79 aa4.69□□□□□ -1.66
UBE2D3-227ENST00000508818 C5orf47Q569G3 176 aa4.69□□□□□ -1.66
UBE2D3-227ENST00000508818 COL5A1-AS1Q5SY13 56 aa4.69□□□□□ -1.66
UBE2D3-227ENST00000508818 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
UBE2D3-227ENST00000508818 CSAG1Q6PB30 78 aa4.66□□□□□ -1.66
UBE2D3-227ENST00000508818 C1orf64Q8NEQ6 169 aa4.66□□□□□ -1.66
UBE2D3-227ENST00000508818 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms