RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
PRPF40B-203ENST00000508736 LRP1BQ9NZR2 4599 aa6.87□□□□□ -1.31
PRPF40B-203ENST00000508736 PKHD1P08F94 4074 aa6.86□□□□□ -1.31
PRPF40B-203ENST00000508736 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
PRPF40B-203ENST00000508736 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
PRPF40B-203ENST00000508736 FAM229BQ4G0N7 80 aa6.85□□□□□ -1.31
PRPF40B-203ENST00000508736 C1orf64Q8NEQ6 169 aa6.85□□□□□ -1.31
PRPF40B-203ENST00000508736 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
PRPF40B-203ENST00000508736 IGHV6-1A0A0B4J1U7 121 aa6.84□□□□□ -1.31
PRPF40B-203ENST00000508736 CD164Q04900 197 aa6.84□□□□□ -1.31
PRPF40B-203ENST00000508736 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
PRPF40B-203ENST00000508736 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
PRPF40B-203ENST00000508736 PRR4Q16378 134 aa6.81□□□□□ -1.32
PRPF40B-203ENST00000508736 MPLKIPQ8TAP9 179 aa6.81□□□□□ -1.32
PRPF40B-203ENST00000508736 NDUFS5O43920 106 aa6.8□□□□□ -1.32
PRPF40B-203ENST00000508736 MRPL34Q9BQ48 92 aaKnown RBP6.8□□□□□ -1.32
PRPF40B-203ENST00000508736 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
PRPF40B-203ENST00000508736 Q1T7F1 81 aa6.77□□□□□ -1.33
PRPF40B-203ENST00000508736 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
PRPF40B-203ENST00000508736 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
PRPF40B-203ENST00000508736 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
PRPF40B-203ENST00000508736 V9GYY9 64 aa6.75□□□□□ -1.33
PRPF40B-203ENST00000508736 KRTAP1-4P0C5Y4 121 aa6.74□□□□□ -1.33
PRPF40B-203ENST00000508736 IGLV7-46A0A075B6I9 117 aa6.73□□□□□ -1.33
PRPF40B-203ENST00000508736 PRO0628Q9UI54 55 aa6.73□□□□□ -1.33
PRPF40B-203ENST00000508736 A0A087X002 238 aa6.73□□□□□ -1.33
PRPF40B-203ENST00000508736 SMR3BP02814 79 aaPredicted RBP6.73□□□□□ -1.33
PRPF40B-203ENST00000508736 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
PRPF40B-203ENST00000508736 APOBP04114 4563 aaKnown RBP6.7□□□□□ -1.34
PRPF40B-203ENST00000508736 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
PRPF40B-203ENST00000508736 NOTCH2NLQ7Z3S9 236 aa6.7□□□□□ -1.34
PRPF40B-203ENST00000508736 LOC101927531A0A1B0GV80 90 aa6.7□□□□□ -1.34
PRPF40B-203ENST00000508736 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
PRPF40B-203ENST00000508736 BRK1Q8WUW1 75 aa6.68□□□□□ -1.34
PRPF40B-203ENST00000508736 LIMD2Q9BT23 127 aa6.68□□□□□ -1.34
PRPF40B-203ENST00000508736 KIAA1109Q2LD37 5005 aa6.67□□□□□ -1.34
PRPF40B-203ENST00000508736 PLA2G1BP04054 148 aaKnown RBP6.66□□□□□ -1.34
PRPF40B-203ENST00000508736 COA5Q86WW8 74 aa6.66□□□□□ -1.34
PRPF40B-203ENST00000508736 LINC00313P59037 77 aa6.66□□□□□ -1.34
PRPF40B-203ENST00000508736 BIRC6Q9NR09 4857 aa6.65□□□□□ -1.34
PRPF40B-203ENST00000508736 RYR1P21817 5038 aa6.64□□□□□ -1.35
PRPF40B-203ENST00000508736 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
PRPF40B-203ENST00000508736 PSPHP1O15172 72 aa6.63□□□□□ -1.35
PRPF40B-203ENST00000508736 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
PRPF40B-203ENST00000508736 KRTAP10-4P60372 401 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-203ENST00000508736 C4orf48Q5BLP8 95 aa6.62□□□□□ -1.35
PRPF40B-203ENST00000508736 TYMSOSQ8TAI1 123 aa6.62□□□□□ -1.35
PRPF40B-203ENST00000508736 FAT1Q14517 4588 aa6.62□□□□□ -1.35
PRPF40B-203ENST00000508736 Q8N9P0 234 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-203ENST00000508736 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
PRPF40B-203ENST00000508736 Q5W150 140 aa6.61□□□□□ -1.35
PRPF40B-203ENST00000508736 SPINK1P00995 79 aa6.6□□□□□ -1.35
PRPF40B-203ENST00000508736 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
PRPF40B-203ENST00000508736 Q5VSD8 79 aa6.6□□□□□ -1.35
PRPF40B-203ENST00000508736 HSPG2P98160 4391 aa6.6□□□□□ -1.35
PRPF40B-203ENST00000508736 Q8N1X5 172 aa6.6□□□□□ -1.35
PRPF40B-203ENST00000508736 A8MUN3 132 aa6.59□□□□□ -1.35
PRPF40B-203ENST00000508736 SPAG11AQ6PDA7 123 aa6.58□□□□□ -1.36
PRPF40B-203ENST00000508736 HRES1P13985 223 aa6.56□□□□□ -1.36
PRPF40B-203ENST00000508736 PRR15LQ9BU68 103 aa6.56□□□□□ -1.36
PRPF40B-203ENST00000508736 Q5VV11 94 aa6.56□□□□□ -1.36
PRPF40B-203ENST00000508736 PRR26Q8N8Z3 221 aa6.56□□□□□ -1.36
PRPF40B-203ENST00000508736 LINC00304Q8N9R0 145 aa6.55□□□□□ -1.36
PRPF40B-203ENST00000508736 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
PRPF40B-203ENST00000508736 PKHD1L1Q86WI1 4243 aa6.53□□□□□ -1.36
PRPF40B-203ENST00000508736 ACYP2P14621 99 aa6.53□□□□□ -1.36
PRPF40B-203ENST00000508736 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
PRPF40B-203ENST00000508736 CHKB-CPT1BH3BT56 60 aa6.52□□□□□ -1.37
PRPF40B-203ENST00000508736 IGKV2-30P06310 120 aa6.52□□□□□ -1.37
PRPF40B-203ENST00000508736 Q75L30 129 aa6.51□□□□□ -1.37
PRPF40B-203ENST00000508736 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
PRPF40B-203ENST00000508736 HERC2O95714 4834 aa6.5□□□□□ -1.37
PRPF40B-203ENST00000508736 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
PRPF40B-203ENST00000508736 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
PRPF40B-203ENST00000508736 A6NED7 52 aa6.45□□□□□ -1.38
PRPF40B-203ENST00000508736 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
PRPF40B-203ENST00000508736 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
PRPF40B-203ENST00000508736 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.38
PRPF40B-203ENST00000508736 C7orf65Q6ZTY9 151 aa6.39□□□□□ -1.39
PRPF40B-203ENST00000508736 KRTAP10-8P60410 259 aa6.38□□□□□ -1.39
PRPF40B-203ENST00000508736 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
PRPF40B-203ENST00000508736 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
PRPF40B-203ENST00000508736 MYCBP2O75592 4640 aa6.36□□□□□ -1.39
PRPF40B-203ENST00000508736 TNXBP22105 4242 aa6.36□□□□□ -1.39
PRPF40B-203ENST00000508736 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
PRPF40B-203ENST00000508736 LCA10Q71F78 164 aa6.34□□□□□ -1.39
PRPF40B-203ENST00000508736 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
PRPF40B-203ENST00000508736 A8MU10 97 aa6.33□□□□□ -1.4
PRPF40B-203ENST00000508736 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
PRPF40B-203ENST00000508736 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
PRPF40B-203ENST00000508736 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
PRPF40B-203ENST00000508736 A0A1B0GU69 56 aa6.31□□□□□ -1.4
PRPF40B-203ENST00000508736 A8MUU9 505 aa6.31□□□□□ -1.4
PRPF40B-203ENST00000508736 SPINK7P58062 85 aa6.31□□□□□ -1.4
PRPF40B-203ENST00000508736 C20orf166-AS1Q96NR2 134 aa6.31□□□□□ -1.4
PRPF40B-203ENST00000508736 C9orf92A6NGG3 77 aa6.29□□□□□ -1.4
PRPF40B-203ENST00000508736 J3QL48 77 aa6.29□□□□□ -1.4
PRPF40B-203ENST00000508736 MT1HL1P0DM35 61 aa6.29□□□□□ -1.4
PRPF40B-203ENST00000508736 DMBT1Q9UGM3 2413 aaPredicted RBP6.24□□□□□ -1.41
PRPF40B-203ENST00000508736 A6NN06 94 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms