RNA–Protein interactions for RNA: ENST00000508619.1

LINC02171-201, Transcript of long intergenic non-protein coding RNA 2171, humanhuman

TSL 1 (best) BASIC

Gene LINC02171, Length 1,033 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02171-201ENST00000508619 DSCR8Q96T75 97 aa6.97□□□□□ -1.29
LINC02171-201ENST00000508619 VPS25Q9BRG1 176 aa6.97□□□□□ -1.29
LINC02171-201ENST00000508619 SIGMAR1Q99720 223 aa6.96□□□□□ -1.3
LINC02171-201ENST00000508619 RBM3P98179 157 aaKnown RBP6.95□□□□□ -1.3
LINC02171-201ENST00000508619 MTURNQ8N3F0 131 aa6.95□□□□□ -1.3
LINC02171-201ENST00000508619 K7EP34 96 aa6.94□□□□□ -1.3
LINC02171-201ENST00000508619 LINC00313P59037 77 aa6.94□□□□□ -1.3
LINC02171-201ENST00000508619 JMJD7-PLA2G4BH0Y9G9 81 aa6.93□□□□□ -1.3
LINC02171-201ENST00000508619 IGKV4-1P06312 121 aa6.93□□□□□ -1.3
LINC02171-201ENST00000508619 DSCR10P59022 87 aa6.93□□□□□ -1.3
LINC02171-201ENST00000508619 LINC00472Q9H8W2 130 aa6.93□□□□□ -1.3
LINC02171-201ENST00000508619 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
LINC02171-201ENST00000508619 H3BT86 120 aa6.92□□□□□ -1.3
LINC02171-201ENST00000508619 CCKP06307 115 aa6.92□□□□□ -1.3
LINC02171-201ENST00000508619 C21orf62-AS1Q17RA5 79 aa6.92□□□□□ -1.3
LINC02171-201ENST00000508619 C8orf87E5RJ46 101 aa6.86□□□□□ -1.31
LINC02171-201ENST00000508619 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
LINC02171-201ENST00000508619 PDE6GP18545 87 aa6.85□□□□□ -1.31
LINC02171-201ENST00000508619 F8W1H4 67 aa6.84□□□□□ -1.31
LINC02171-201ENST00000508619 J3KT08 172 aa6.84□□□□□ -1.31
LINC02171-201ENST00000508619 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
LINC02171-201ENST00000508619 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
LINC02171-201ENST00000508619 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
LINC02171-201ENST00000508619 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
LINC02171-201ENST00000508619 A0A1B0GW54 56 aa6.83□□□□□ -1.32
LINC02171-201ENST00000508619 A0A1B0GV90 55 aa6.82□□□□□ -1.32
LINC02171-201ENST00000508619 DEFB116Q30KQ4 102 aa6.82□□□□□ -1.32
LINC02171-201ENST00000508619 Q6ZQT0 140 aa6.8□□□□□ -1.32
LINC02171-201ENST00000508619 KRTAP9-8Q9BYQ0 159 aa6.8□□□□□ -1.32
LINC02171-201ENST00000508619 RBM12B-AS1Q9P1G2 102 aa6.8□□□□□ -1.32
LINC02171-201ENST00000508619 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
LINC02171-201ENST00000508619 HRES1P13985 223 aa6.79□□□□□ -1.32
LINC02171-201ENST00000508619 FAM236DA0A1B0GTK5 79 aa6.76□□□□□ -1.33
LINC02171-201ENST00000508619 FAM236CP0DP71 79 aa6.76□□□□□ -1.33
LINC02171-201ENST00000508619 NDUFB1O75438 58 aa6.75□□□□□ -1.33
LINC02171-201ENST00000508619 NREPQ16612 68 aa6.75□□□□□ -1.33
LINC02171-201ENST00000508619 ETDBQ3ZM63 59 aa6.75□□□□□ -1.33
LINC02171-201ENST00000508619 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
LINC02171-201ENST00000508619 ZCCHC13Q8WW36 166 aaKnown RBP6.74□□□□□ -1.33
LINC02171-201ENST00000508619 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
LINC02171-201ENST00000508619 A8MWP4 228 aa6.72□□□□□ -1.33
LINC02171-201ENST00000508619 UBL5Q9BZL1 73 aa6.7□□□□□ -1.34
LINC02171-201ENST00000508619 C8orf17Q9NRJ1 99 aa6.69□□□□□ -1.34
LINC02171-201ENST00000508619 MT2AP02795 61 aa6.68□□□□□ -1.34
LINC02171-201ENST00000508619 SPINK7P58062 85 aa6.68□□□□□ -1.34
LINC02171-201ENST00000508619 USH2AO75445 5202 aa6.68□□□□□ -1.34
LINC02171-201ENST00000508619 IGKV3D-7A0A0C4DH55 119 aa6.66□□□□□ -1.34
LINC02171-201ENST00000508619 J3QR89 54 aa6.65□□□□□ -1.34
LINC02171-201ENST00000508619 BPY2O14599 106 aa6.65□□□□□ -1.34
LINC02171-201ENST00000508619 PRR15Q8IV56 129 aa6.65□□□□□ -1.34
LINC02171-201ENST00000508619 Q6ZVQ6 151 aa6.64□□□□□ -1.35
LINC02171-201ENST00000508619 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
LINC02171-201ENST00000508619 MT1FP04733 61 aa6.62□□□□□ -1.35
LINC02171-201ENST00000508619 ACYP1P07311 99 aa6.61□□□□□ -1.35
LINC02171-201ENST00000508619 TMEM254Q8TBM7 123 aa6.6□□□□□ -1.35
LINC02171-201ENST00000508619 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
LINC02171-201ENST00000508619 LINC00846Q9NV44 126 aa6.59□□□□□ -1.35
LINC02171-201ENST00000508619 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
LINC02171-201ENST00000508619 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
LINC02171-201ENST00000508619 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
LINC02171-201ENST00000508619 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
LINC02171-201ENST00000508619 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
LINC02171-201ENST00000508619 K7EQZ3 153 aa6.54□□□□□ -1.36
LINC02171-201ENST00000508619 FAM240AA0A1B0GVK7 77 aa6.53□□□□□ -1.36
LINC02171-201ENST00000508619 NDUFS5O43920 106 aa6.52□□□□□ -1.37
LINC02171-201ENST00000508619 FCGBPQ9Y6R7 5405 aaPredicted RBP6.51□□□□□ -1.37
LINC02171-201ENST00000508619 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
LINC02171-201ENST00000508619 K7ERU9 68 aa6.5□□□□□ -1.37
LINC02171-201ENST00000508619 HIST1H4AP62805 103 aaKnown RBP6.5□□□□□ -1.37
LINC02171-201ENST00000508619 Q8N9L7 120 aa6.5□□□□□ -1.37
LINC02171-201ENST00000508619 CXCL6P80162 114 aa6.48□□□□□ -1.37
LINC02171-201ENST00000508619 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
LINC02171-201ENST00000508619 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
LINC02171-201ENST00000508619 CASC2Q6XLA1 102 aa6.46□□□□□ -1.38
LINC02171-201ENST00000508619 C7orf65Q6ZTY9 151 aa6.45□□□□□ -1.38
LINC02171-201ENST00000508619 LINC00643Q86TS7 51 aa6.45□□□□□ -1.38
LINC02171-201ENST00000508619 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
LINC02171-201ENST00000508619 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
LINC02171-201ENST00000508619 HCG22E2RYF7 251 aa6.43□□□□□ -1.38
LINC02171-201ENST00000508619 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
LINC02171-201ENST00000508619 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
LINC02171-201ENST00000508619 Q5W150 140 aa6.41□□□□□ -1.38
LINC02171-201ENST00000508619 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
LINC02171-201ENST00000508619 SCGB1A1P11684 91 aa6.34□□□□□ -1.39
LINC02171-201ENST00000508619 A0A087WVE0 104 aa6.31□□□□□ -1.4
LINC02171-201ENST00000508619 TP53AIP1Q9HCN2 124 aa6.3□□□□□ -1.4
LINC02171-201ENST00000508619 C4orf26Q17RF5 130 aa6.29□□□□□ -1.4
LINC02171-201ENST00000508619 MACF1Q9UPN3 7388 aaKnown RBP6.29□□□□□ -1.4
LINC02171-201ENST00000508619 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
LINC02171-201ENST00000508619 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
LINC02171-201ENST00000508619 KRTAP3-1Q9BYR8 98 aa6.23□□□□□ -1.41
LINC02171-201ENST00000508619 IMUPQ9GZP8 106 aa6.23□□□□□ -1.41
LINC02171-201ENST00000508619 UQCRQO14949 82 aa6.21□□□□□ -1.42
LINC02171-201ENST00000508619 MP68P56378 58 aa6.2□□□□□ -1.42
LINC02171-201ENST00000508619 S4R3F8 94 aa6.2□□□□□ -1.42
LINC02171-201ENST00000508619 TRAV22A0A0B4J277 110 aa6.19□□□□□ -1.42
LINC02171-201ENST00000508619 C5orf47Q569G3 176 aa6.19□□□□□ -1.42
LINC02171-201ENST00000508619 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
LINC02171-201ENST00000508619 C1orf64Q8NEQ6 169 aa6.19□□□□□ -1.42
LINC02171-201ENST00000508619 FAM236AA0A1B0GUQ0 79 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms