RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 VPS25Q9BRG1 176 aa6.58□□□□□ -1.36
PTPN20-218ENST00000508357 A0A0U1RQV1 116 aa6.57□□□□□ -1.36
PTPN20-218ENST00000508357 DEFB116Q30KQ4 102 aa6.57□□□□□ -1.36
PTPN20-218ENST00000508357 SIGMAR1Q99720 223 aa6.57□□□□□ -1.36
PTPN20-218ENST00000508357 LOC110117498A0A087WWA1 95 aa6.56□□□□□ -1.36
PTPN20-218ENST00000508357 DSCR10P59022 87 aa6.56□□□□□ -1.36
PTPN20-218ENST00000508357 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
PTPN20-218ENST00000508357 C14orf132Q9NPU4 83 aa6.55□□□□□ -1.36
PTPN20-218ENST00000508357 JMJD7-PLA2G4BH0Y9G9 81 aa6.54□□□□□ -1.36
PTPN20-218ENST00000508357 IGKV4-1P06312 121 aa6.54□□□□□ -1.36
PTPN20-218ENST00000508357 Q75L30 129 aa6.54□□□□□ -1.36
PTPN20-218ENST00000508357 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
PTPN20-218ENST00000508357 H3BT86 120 aa6.53□□□□□ -1.36
PTPN20-218ENST00000508357 NOTCH2NLQ7Z3S9 236 aa6.53□□□□□ -1.36
PTPN20-218ENST00000508357 COL5A1-AS1Q5SY13 56 aa6.52□□□□□ -1.37
PTPN20-218ENST00000508357 C20orf166-AS1Q96NR2 134 aa6.52□□□□□ -1.37
PTPN20-218ENST00000508357 SPCS1Q9Y6A9 102 aa6.52□□□□□ -1.37
PTPN20-218ENST00000508357 A8MUU9 505 aa6.51□□□□□ -1.37
PTPN20-218ENST00000508357 KRTAP4-8A0A0G2JLE6 195 aa6.49□□□□□ -1.37
PTPN20-218ENST00000508357 PCP4L1A6NKN8 68 aa6.49□□□□□ -1.37
PTPN20-218ENST00000508357 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
PTPN20-218ENST00000508357 FLGP20930 4061 aaPredicted RBP6.48□□□□□ -1.37
PTPN20-218ENST00000508357 PDE6GP18545 87 aa6.47□□□□□ -1.37
PTPN20-218ENST00000508357 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
PTPN20-218ENST00000508357 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
PTPN20-218ENST00000508357 K7EP34 96 aa6.46□□□□□ -1.38
PTPN20-218ENST00000508357 LINC00313P59037 77 aa6.46□□□□□ -1.38
PTPN20-218ENST00000508357 C21orf62-AS1Q17RA5 79 aa6.46□□□□□ -1.38
PTPN20-218ENST00000508357 A0A1B0GW54 56 aa6.45□□□□□ -1.38
PTPN20-218ENST00000508357 ATP11AUNQ6ZP68 121 aa6.43□□□□□ -1.38
PTPN20-218ENST00000508357 J3KT08 172 aa6.42□□□□□ -1.38
PTPN20-218ENST00000508357 IGKV3D-7A0A0C4DH55 119 aa6.41□□□□□ -1.38
PTPN20-218ENST00000508357 C8orf87E5RJ46 101 aa6.41□□□□□ -1.38
PTPN20-218ENST00000508357 A8MWP4 228 aa6.4□□□□□ -1.38
PTPN20-218ENST00000508357 MT1HP80294 61 aa6.4□□□□□ -1.38
PTPN20-218ENST00000508357 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
PTPN20-218ENST00000508357 NREPQ16612 68 aa6.37□□□□□ -1.39
PTPN20-218ENST00000508357 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
PTPN20-218ENST00000508357 C8orf17Q9NRJ1 99 aa6.37□□□□□ -1.39
PTPN20-218ENST00000508357 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
PTPN20-218ENST00000508357 K7EQZ3 153 aa6.34□□□□□ -1.39
PTPN20-218ENST00000508357 Q6ZVQ6 151 aa6.34□□□□□ -1.39
PTPN20-218ENST00000508357 PRR15Q8IV56 129 aa6.34□□□□□ -1.39
PTPN20-218ENST00000508357 NDUFB1O75438 58 aa6.33□□□□□ -1.4
PTPN20-218ENST00000508357 GTF2H5Q6ZYL4 71 aa6.33□□□□□ -1.4
PTPN20-218ENST00000508357 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
PTPN20-218ENST00000508357 LINC00846Q9NV44 126 aa6.31□□□□□ -1.4
PTPN20-218ENST00000508357 COX6B2Q6YFQ2 88 aa6.3□□□□□ -1.4
PTPN20-218ENST00000508357 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
PTPN20-218ENST00000508357 HRES1P13985 223 aa6.29□□□□□ -1.4
PTPN20-218ENST00000508357 Q8N9L7 120 aa6.29□□□□□ -1.4
PTPN20-218ENST00000508357 F8W1H4 67 aa6.28□□□□□ -1.4
PTPN20-218ENST00000508357 BPY2O14599 106 aa6.28□□□□□ -1.4
PTPN20-218ENST00000508357 ETDBQ3ZM63 59 aa6.28□□□□□ -1.4
PTPN20-218ENST00000508357 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
PTPN20-218ENST00000508357 TMEM254Q8TBM7 123 aa6.27□□□□□ -1.41
PTPN20-218ENST00000508357 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
PTPN20-218ENST00000508357 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
PTPN20-218ENST00000508357 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
PTPN20-218ENST00000508357 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
PTPN20-218ENST00000508357 hDV103S1A0JD37 113 aa6.23□□□□□ -1.41
PTPN20-218ENST00000508357 UBL5Q9BZL1 73 aa6.22□□□□□ -1.41
PTPN20-218ENST00000508357 WFDC13Q8IUB5 93 aa6.21□□□□□ -1.42
PTPN20-218ENST00000508357 SPINK7P58062 85 aa6.2□□□□□ -1.42
PTPN20-218ENST00000508357 M0R2T5 61 aa6.19□□□□□ -1.42
PTPN20-218ENST00000508357 A0A1B0GV90 55 aa6.17□□□□□ -1.42
PTPN20-218ENST00000508357 CASC2Q6XLA1 102 aa6.17□□□□□ -1.42
PTPN20-218ENST00000508357 Q5W150 140 aa6.16□□□□□ -1.42
PTPN20-218ENST00000508357 NDUFS5O43920 106 aa6.15□□□□□ -1.42
PTPN20-218ENST00000508357 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
PTPN20-218ENST00000508357 FAM236DA0A1B0GTK5 79 aa6.14□□□□□ -1.43
PTPN20-218ENST00000508357 HCG22E2RYF7 251 aa6.14□□□□□ -1.43
PTPN20-218ENST00000508357 FAM236CP0DP71 79 aa6.14□□□□□ -1.43
PTPN20-218ENST00000508357 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
PTPN20-218ENST00000508357 KRTAP9-7A8MTY7 169 aa6.13□□□□□ -1.43
PTPN20-218ENST00000508357 CXCL6P80162 114 aa6.12□□□□□ -1.43
PTPN20-218ENST00000508357 FAM240AA0A1B0GVK7 77 aa6.1□□□□□ -1.43
PTPN20-218ENST00000508357 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
PTPN20-218ENST00000508357 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
PTPN20-218ENST00000508357 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
PTPN20-218ENST00000508357 ACYP1P07311 99 aa6.07□□□□□ -1.44
PTPN20-218ENST00000508357 C7orf65Q6ZTY9 151 aa6.05□□□□□ -1.44
PTPN20-218ENST00000508357 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
PTPN20-218ENST00000508357 MT2AP02795 61 aa6.02□□□□□ -1.45
PTPN20-218ENST00000508357 ATP5EP2Q5VTU8 51 aa6.02□□□□□ -1.45
PTPN20-218ENST00000508357 USH2AO75445 5202 aa6□□□□□ -1.45
PTPN20-218ENST00000508357 MT1FP04733 61 aa5.99□□□□□ -1.45
PTPN20-218ENST00000508357 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
PTPN20-218ENST00000508357 TP53AIP1Q9HCN2 124 aa5.97□□□□□ -1.45
PTPN20-218ENST00000508357 A0A087WVE0 104 aa5.96□□□□□ -1.46
PTPN20-218ENST00000508357 C4orf26Q17RF5 130 aa5.96□□□□□ -1.46
PTPN20-218ENST00000508357 LINC00643Q86TS7 51 aa5.96□□□□□ -1.46
PTPN20-218ENST00000508357 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
PTPN20-218ENST00000508357 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
PTPN20-218ENST00000508357 KRTAP4-11Q9BYQ6 195 aa5.95□□□□□ -1.46
PTPN20-218ENST00000508357 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
PTPN20-218ENST00000508357 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
PTPN20-218ENST00000508357 SSPOA2VEC9 5147 aa5.92□□□□□ -1.46
PTPN20-218ENST00000508357 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
PTPN20-218ENST00000508357 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms