RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 GCN1Q92616 2671 aaKnown RBP-0.16□□□□□ -2.44
TRAPPC13-209ENST00000508304 MXRA5Q9NR99 2828 aa-0.16□□□□□ -2.44
TRAPPC13-209ENST00000508304 NMES1Q9C002 83 aa-0.17□□□□□ -2.44
TRAPPC13-209ENST00000508304 LRRK2Q5S007 2527 aa-0.17□□□□□ -2.44
TRAPPC13-209ENST00000508304 CUBNO60494 3623 aa-0.18□□□□□ -2.44
TRAPPC13-209ENST00000508304 FASNP49327 2511 aaKnown RBP-0.18□□□□□ -2.44
TRAPPC13-209ENST00000508304 FLGP20930 4061 aaPredicted RBP-0.18□□□□□ -2.44
TRAPPC13-209ENST00000508304 SFTA3P0C7M3 94 aa-0.18□□□□□ -2.44
TRAPPC13-209ENST00000508304 HIVEP1P15822 2718 aa-0.19□□□□□ -2.44
TRAPPC13-209ENST00000508304 AKAP9Q99996 3911 aa-0.19□□□□□ -2.44
TRAPPC13-209ENST00000508304 SMIM31A0A1B0GVY4 71 aa-0.19□□□□□ -2.44
TRAPPC13-209ENST00000508304 M0R1W7 72 aa-0.19□□□□□ -2.44
TRAPPC13-209ENST00000508304 KRTAP19-7Q3SYF9 63 aa-0.19□□□□□ -2.44
TRAPPC13-209ENST00000508304 SMIM5Q71RC9 77 aa-0.19□□□□□ -2.44
TRAPPC13-209ENST00000508304 PKD1P98161 4303 aa-0.19□□□□□ -2.44
TRAPPC13-209ENST00000508304 ANKRD11Q6UB99 2663 aaPredicted RBP-0.2□□□□□ -2.44
TRAPPC13-209ENST00000508304 UTP20O75691 2785 aaKnown RBP-0.2□□□□□ -2.44
TRAPPC13-209ENST00000508304 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.21□□□□□ -2.44
TRAPPC13-209ENST00000508304 ACACAQ13085 2346 aa-0.21□□□□□ -2.44
TRAPPC13-209ENST00000508304 MUC2Q02817 5179 aa-0.21□□□□□ -2.44
TRAPPC13-209ENST00000508304 KALRNO60229 2985 aa-0.22□□□□□ -2.44
TRAPPC13-209ENST00000508304 TOGARAM1Q9Y4F4 1720 aa-0.22□□□□□ -2.44
TRAPPC13-209ENST00000508304 DEFB110Q30KQ9 67 aa-0.23□□□□□ -2.45
TRAPPC13-209ENST00000508304 TACC2O95359 2948 aa-0.23□□□□□ -2.45
TRAPPC13-209ENST00000508304 ABCA6Q8N139 1617 aa-0.24□□□□□ -2.45
TRAPPC13-209ENST00000508304 NOP10Q9NPE3 64 aaKnown RBP-0.24□□□□□ -2.45
TRAPPC13-209ENST00000508304 FAM186AA6NE01 2351 aa-0.24□□□□□ -2.45
TRAPPC13-209ENST00000508304 ABRACLQ9P1F3 81 aa-0.25□□□□□ -2.45
TRAPPC13-209ENST00000508304 TEP1Q99973 2627 aaKnown RBP-0.25□□□□□ -2.45
TRAPPC13-209ENST00000508304 TMEM167BQ9NRX6 74 aa-0.26□□□□□ -2.45
TRAPPC13-209ENST00000508304 NEBP20929 6669 aa-0.27□□□□□ -2.45
TRAPPC13-209ENST00000508304 CLASP1Q7Z460 1538 aa-0.27□□□□□ -2.45
TRAPPC13-209ENST00000508304 DNAH9Q9NYC9 4486 aa-0.27□□□□□ -2.45
TRAPPC13-209ENST00000508304 MT1AP04731 61 aa-0.27□□□□□ -2.45
TRAPPC13-209ENST00000508304 TIAM1Q13009 1591 aa-0.28□□□□□ -2.45
TRAPPC13-209ENST00000508304 VPS13BQ7Z7G8 4022 aa-0.28□□□□□ -2.45
TRAPPC13-209ENST00000508304 EEA1Q15075 1411 aa-0.28□□□□□ -2.45
TRAPPC13-209ENST00000508304 NBEAQ8NFP9 2946 aa-0.28□□□□□ -2.45
TRAPPC13-209ENST00000508304 IGLV5-48A0A075B6I7 105 aa-0.28□□□□□ -2.45
TRAPPC13-209ENST00000508304 ABCA10Q8WWZ4 1543 aa-0.28□□□□□ -2.45
TRAPPC13-209ENST00000508304 CDC42BPAQ5VT25 1732 aa-0.29□□□□□ -2.46
TRAPPC13-209ENST00000508304 CROCC2H7BZ55 1655 aa-0.29□□□□□ -2.46
TRAPPC13-209ENST00000508304 SPRR2FQ96RM1 72 aa-0.29□□□□□ -2.46
TRAPPC13-209ENST00000508304 CPS1P31327 1500 aa-0.29□□□□□ -2.46
TRAPPC13-209ENST00000508304 KMT2CQ8NEZ4 4911 aaKnown RBP-0.3□□□□□ -2.46
TRAPPC13-209ENST00000508304 NBPF19A0A087WUL8 3843 aa-0.3□□□□□ -2.46
TRAPPC13-209ENST00000508304 CCDC168Q8NDH2 2452 aa-0.31□□□□□ -2.46
TRAPPC13-209ENST00000508304 MMP24-AS1A0A0U1RRL7 71 aa-0.31□□□□□ -2.46
TRAPPC13-209ENST00000508304 LY75O60449 1722 aa-0.31□□□□□ -2.46
TRAPPC13-209ENST00000508304 HERC1Q15751 4861 aa-0.31□□□□□ -2.46
TRAPPC13-209ENST00000508304 DNAH6Q9C0G6 4158 aa-0.31□□□□□ -2.46
TRAPPC13-209ENST00000508304 UGGT1Q9NYU2 1555 aa-0.32□□□□□ -2.46
TRAPPC13-209ENST00000508304 LAMA5O15230 3695 aa-0.32□□□□□ -2.46
TRAPPC13-209ENST00000508304 KRTAP19-8Q3LI54 63 aa-0.32□□□□□ -2.46
TRAPPC13-209ENST00000508304 FAT3Q8TDW7 4589 aa-0.32□□□□□ -2.46
TRAPPC13-209ENST00000508304 MGAM2Q2M2H8 2515 aa-0.32□□□□□ -2.46
TRAPPC13-209ENST00000508304 MYO18BQ8IUG5 2567 aa-0.33□□□□□ -2.46
TRAPPC13-209ENST00000508304 NBEAL2Q6ZNJ1 2754 aa-0.33□□□□□ -2.46
TRAPPC13-209ENST00000508304 RANBP2P49792 3224 aaKnown RBP-0.33□□□□□ -2.46
TRAPPC13-209ENST00000508304 LINC00308Q8TCZ7 52 aa-0.34□□□□□ -2.46
TRAPPC13-209ENST00000508304 ERICH3Q5RHP9 1530 aa-0.34□□□□□ -2.46
TRAPPC13-209ENST00000508304 PCLOQ9Y6V0 5065 aa-0.35□□□□□ -2.46
TRAPPC13-209ENST00000508304 GLI2P10070 1586 aa-0.35□□□□□ -2.47
TRAPPC13-209ENST00000508304 VPS13DQ5THJ4 4388 aa-0.35□□□□□ -2.47
TRAPPC13-209ENST00000508304 IGIPA6NJ69 53 aa-0.35□□□□□ -2.47
TRAPPC13-209ENST00000508304 RIF1Q5UIP0 2472 aaKnown RBP-0.35□□□□□ -2.47
TRAPPC13-209ENST00000508304 ANK3Q12955 4377 aaKnown RBP-0.35□□□□□ -2.47
TRAPPC13-209ENST00000508304 PRXQ9BXM0 1461 aa-0.35□□□□□ -2.47
TRAPPC13-209ENST00000508304 ACACBO00763 2458 aa-0.36□□□□□ -2.47
TRAPPC13-209ENST00000508304 DNAH3Q8TD57 4116 aa-0.36□□□□□ -2.47
TRAPPC13-209ENST00000508304 STARD9Q9P2P6 4700 aa-0.36□□□□□ -2.47
TRAPPC13-209ENST00000508304 TNP1P09430 55 aa-0.36□□□□□ -2.47
TRAPPC13-209ENST00000508304 TRIOO75962 3097 aa-0.36□□□□□ -2.47
TRAPPC13-209ENST00000508304 WDR87Q6ZQQ6 2873 aa-0.36□□□□□ -2.47
TRAPPC13-209ENST00000508304 ITPR3Q14573 2671 aa-0.37□□□□□ -2.47
TRAPPC13-209ENST00000508304 LAMA1P25391 3075 aa-0.37□□□□□ -2.47
TRAPPC13-209ENST00000508304 SMIM27A0A1W2PRY6 76 aa-0.37□□□□□ -2.47
TRAPPC13-209ENST00000508304 H0YGX0 51 aa-0.37□□□□□ -2.47
TRAPPC13-209ENST00000508304 FAT1Q14517 4588 aa-0.37□□□□□ -2.47
TRAPPC13-209ENST00000508304 ALS2Q96Q42 1657 aa-0.37□□□□□ -2.47
TRAPPC13-209ENST00000508304 A0A1B0GUL6 1792 aa-0.37□□□□□ -2.47
TRAPPC13-209ENST00000508304 USP9YO00507 2555 aaPredicted RBP-0.38□□□□□ -2.47
TRAPPC13-209ENST00000508304 PKHD1L1Q86WI1 4243 aa-0.38□□□□□ -2.47
TRAPPC13-209ENST00000508304 KAAG1Q9UBP8 84 aa-0.38□□□□□ -2.47
TRAPPC13-209ENST00000508304 M0QY20 66 aa-0.39□□□□□ -2.47
TRAPPC13-209ENST00000508304 EFCAB6Q5THR3 1501 aa-0.4□□□□□ -2.47
TRAPPC13-209ENST00000508304 DNAH11Q96DT5 4516 aa-0.4□□□□□ -2.47
TRAPPC13-209ENST00000508304 APOBP04114 4563 aaKnown RBP-0.42□□□□□ -2.48
TRAPPC13-209ENST00000508304 MUC17Q685J3 4493 aa-0.42□□□□□ -2.48
TRAPPC13-209ENST00000508304 WFDC10BQ8IUB3 73 aa-0.43□□□□□ -2.48
TRAPPC13-209ENST00000508304 USH2AO75445 5202 aa-0.44□□□□□ -2.48
TRAPPC13-209ENST00000508304 CLPSL2Q6UWE3 100 aa-0.44□□□□□ -2.48
TRAPPC13-209ENST00000508304 HERC2O95714 4834 aa-0.44□□□□□ -2.48
TRAPPC13-209ENST00000508304 PLNP26678 52 aa-0.45□□□□□ -2.48
TRAPPC13-209ENST00000508304 COL12A1Q99715 3063 aa-0.45□□□□□ -2.48
TRAPPC13-209ENST00000508304 UBR4Q5T4S7 5183 aa-0.46□□□□□ -2.48
TRAPPC13-209ENST00000508304 TLN2Q9Y4G6 2542 aa-0.46□□□□□ -2.48
TRAPPC13-209ENST00000508304 KRTAP20-2Q3LI61 65 aa-0.46□□□□□ -2.48
TRAPPC13-209ENST00000508304 SACSQ9NZJ4 4579 aa-0.46□□□□□ -2.48
TRAPPC13-209ENST00000508304 RELNP78509 3460 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms