RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 Q96NJ1 140 aa4.39□□□□□ -1.71
SMAD1-206ENST00000507367 IMUPQ9GZP8 106 aa4.39□□□□□ -1.71
SMAD1-206ENST00000507367 FP248Q71RG6 208 aaPredicted RBP4.38□□□□□ -1.71
SMAD1-206ENST00000507367 MT-ATP8P03928 68 aa4.37□□□□□ -1.71
SMAD1-206ENST00000507367 DSCR10P59022 87 aa4.37□□□□□ -1.71
SMAD1-206ENST00000507367 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
SMAD1-206ENST00000507367 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
SMAD1-206ENST00000507367 C8orf87E5RJ46 101 aa4.36□□□□□ -1.71
SMAD1-206ENST00000507367 K7EQZ3 153 aa4.36□□□□□ -1.71
SMAD1-206ENST00000507367 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
SMAD1-206ENST00000507367 PRR15Q8IV56 129 aa4.36□□□□□ -1.71
SMAD1-206ENST00000507367 Q8N9L7 120 aa4.35□□□□□ -1.71
SMAD1-206ENST00000507367 RETNLBQ9BQ08 111 aa4.35□□□□□ -1.71
SMAD1-206ENST00000507367 DMBT1Q9UGM3 2413 aaPredicted RBP4.34□□□□□ -1.72
SMAD1-206ENST00000507367 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
SMAD1-206ENST00000507367 LINC00313P59037 77 aa4.33□□□□□ -1.72
SMAD1-206ENST00000507367 PRR4Q16378 134 aa4.33□□□□□ -1.72
SMAD1-206ENST00000507367 IGLV7-46A0A075B6I9 117 aa4.32□□□□□ -1.72
SMAD1-206ENST00000507367 SCGB1A1P11684 91 aa4.32□□□□□ -1.72
SMAD1-206ENST00000507367 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
SMAD1-206ENST00000507367 C8orf17Q9NRJ1 99 aa4.32□□□□□ -1.72
SMAD1-206ENST00000507367 A0A087WVE0 104 aa4.31□□□□□ -1.72
SMAD1-206ENST00000507367 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
SMAD1-206ENST00000507367 WFDC13Q8IUB5 93 aa4.3□□□□□ -1.72
SMAD1-206ENST00000507367 TMEM254Q8TBM7 123 aa4.3□□□□□ -1.72
SMAD1-206ENST00000507367 MMP24-AS1A0A0U1RRL7 71 aa4.29□□□□□ -1.72
SMAD1-206ENST00000507367 FAM236AA0A1B0GUQ0 79 aa4.29□□□□□ -1.72
SMAD1-206ENST00000507367 FAM236BA0A1B0GV22 79 aa4.29□□□□□ -1.72
SMAD1-206ENST00000507367 SMIM20Q8N5G0 67 aa4.28□□□□□ -1.72
SMAD1-206ENST00000507367 MRPL34Q9BQ48 92 aaKnown RBP4.28□□□□□ -1.72
SMAD1-206ENST00000507367 HERC1Q15751 4861 aa4.27□□□□□ -1.73
SMAD1-206ENST00000507367 C9orf92A6NGG3 77 aa4.27□□□□□ -1.73
SMAD1-206ENST00000507367 ATOX1O00244 68 aa4.27□□□□□ -1.73
SMAD1-206ENST00000507367 NDUFS5O43920 106 aa4.27□□□□□ -1.73
SMAD1-206ENST00000507367 TPRXLQ17RH7 258 aa4.26□□□□□ -1.73
SMAD1-206ENST00000507367 TP53AIP1Q9HCN2 124 aa4.26□□□□□ -1.73
SMAD1-206ENST00000507367 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
SMAD1-206ENST00000507367 NOTCH2NLQ7Z3S9 236 aa4.24□□□□□ -1.73
SMAD1-206ENST00000507367 Q8N9P0 234 aaPredicted RBP4.23□□□□□ -1.73
SMAD1-206ENST00000507367 KRTAP16-1A8MUX0 517 aa4.22□□□□□ -1.73
SMAD1-206ENST00000507367 UQCRQO14949 82 aa4.22□□□□□ -1.73
SMAD1-206ENST00000507367 LORP23490 312 aaPredicted RBP4.22□□□□□ -1.73
SMAD1-206ENST00000507367 TRAV7A0A075B6U4 112 aa4.21□□□□□ -1.74
SMAD1-206ENST00000507367 Q75L30 129 aa4.21□□□□□ -1.74
SMAD1-206ENST00000507367 C20orf166-AS1Q96NR2 134 aa4.21□□□□□ -1.74
SMAD1-206ENST00000507367 ANAPC13Q9BS18 74 aa4.21□□□□□ -1.74
SMAD1-206ENST00000507367 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
SMAD1-206ENST00000507367 A8MUU9 505 aa4.2□□□□□ -1.74
SMAD1-206ENST00000507367 MP68P56378 58 aa4.2□□□□□ -1.74
SMAD1-206ENST00000507367 ATP11AUNQ6ZP68 121 aa4.2□□□□□ -1.74
SMAD1-206ENST00000507367 C5orf47Q569G3 176 aa4.19□□□□□ -1.74
SMAD1-206ENST00000507367 XP32Q5T750 250 aa4.19□□□□□ -1.74
SMAD1-206ENST00000507367 SERP2Q8N6R1 65 aa4.19□□□□□ -1.74
SMAD1-206ENST00000507367 OCR1Q9BZK8 76 aa4.19□□□□□ -1.74
SMAD1-206ENST00000507367 TRAV22A0A0B4J277 110 aa4.18□□□□□ -1.74
SMAD1-206ENST00000507367 RPL37P61927 97 aaKnown RBP4.18□□□□□ -1.74
SMAD1-206ENST00000507367 ZCCHC13Q8WW36 166 aaKnown RBP4.17□□□□□ -1.74
SMAD1-206ENST00000507367 H0Y9P7 68 aa4.16□□□□□ -1.74
SMAD1-206ENST00000507367 H3BPC8 53 aa4.16□□□□□ -1.74
SMAD1-206ENST00000507367 COX7CP15954 63 aa4.15□□□□□ -1.75
SMAD1-206ENST00000507367 SEC61BP60468 96 aaKnown RBP4.15□□□□□ -1.75
SMAD1-206ENST00000507367 LPAP08519 4548 aa4.15□□□□□ -1.75
SMAD1-206ENST00000507367 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
SMAD1-206ENST00000507367 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
SMAD1-206ENST00000507367 LOC101927531A0A1B0GV80 90 aa4.13□□□□□ -1.75
SMAD1-206ENST00000507367 LRP2P98164 4655 aa4.12□□□□□ -1.75
SMAD1-206ENST00000507367 C1orf64Q8NEQ6 169 aa4.12□□□□□ -1.75
SMAD1-206ENST00000507367 LINC00208Q96KT6 92 aa4.12□□□□□ -1.75
SMAD1-206ENST00000507367 Q5W150 140 aa4.11□□□□□ -1.75
SMAD1-206ENST00000507367 C20orf197Q8N268 126 aa4.11□□□□□ -1.75
SMAD1-206ENST00000507367 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
SMAD1-206ENST00000507367 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
SMAD1-206ENST00000507367 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
SMAD1-206ENST00000507367 NDUFC1O43677 76 aa4.09□□□□□ -1.75
SMAD1-206ENST00000507367 IGKV2-30P06310 120 aa4.09□□□□□ -1.75
SMAD1-206ENST00000507367 A0A0U1RQV1 116 aa4.08□□□□□ -1.76
SMAD1-206ENST00000507367 PCP4P48539 62 aa4.08□□□□□ -1.76
SMAD1-206ENST00000507367 KLKP1Q107X0 134 aa4.08□□□□□ -1.76
SMAD1-206ENST00000507367 SNURFQ9Y675 71 aa4.07□□□□□ -1.76
SMAD1-206ENST00000507367 SPINK7P58062 85 aa4.06□□□□□ -1.76
SMAD1-206ENST00000507367 CYP4F30PQ9H0H9 118 aa4.06□□□□□ -1.76
SMAD1-206ENST00000507367 MUC17Q685J3 4493 aa4.05□□□□□ -1.76
SMAD1-206ENST00000507367 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
SMAD1-206ENST00000507367 RBM12B-AS1Q9P1G2 102 aa4.01□□□□□ -1.77
SMAD1-206ENST00000507367 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
SMAD1-206ENST00000507367 HRES1P13985 223 aa3.99□□□□□ -1.77
SMAD1-206ENST00000507367 SPANXA2-OT1Q8N9U9 137 aa3.99□□□□□ -1.77
SMAD1-206ENST00000507367 H7BZZ5 65 aa3.98□□□□□ -1.77
SMAD1-206ENST00000507367 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
SMAD1-206ENST00000507367 TMEM258P61165 79 aa3.98□□□□□ -1.77
SMAD1-206ENST00000507367 RNF213Q63HN8 5207 aa3.98□□□□□ -1.77
SMAD1-206ENST00000507367 FAM236DA0A1B0GTK5 79 aa3.97□□□□□ -1.77
SMAD1-206ENST00000507367 A8MUN3 132 aa3.97□□□□□ -1.77
SMAD1-206ENST00000507367 FAM236CP0DP71 79 aa3.97□□□□□ -1.77
SMAD1-206ENST00000507367 C4orf26Q17RF5 130 aa3.97□□□□□ -1.77
SMAD1-206ENST00000507367 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
SMAD1-206ENST00000507367 COX6B2Q6YFQ2 88 aa3.95□□□□□ -1.78
SMAD1-206ENST00000507367 MUC2Q02817 5179 aa3.94□□□□□ -1.78
SMAD1-206ENST00000507367 ACYP2P14621 99 aa3.93□□□□□ -1.78
SMAD1-206ENST00000507367 DMAC1Q96GE9 116 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms