RNA–Protein interactions for RNA: ENST00000507321.1

SNX2-206, Transcript of sorting nexin 2, humanhuman

TSL 2

Gene SNX2, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-206ENST00000507321 VPS13BQ7Z7G8 4022 aa0.24□□□□□ -2.37
SNX2-206ENST00000507321 TIMM8BQ9Y5J9 83 aaPredicted RBP0.24□□□□□ -2.37
SNX2-206ENST00000507321 FLNBO75369 2602 aaKnown RBP0.24□□□□□ -2.37
SNX2-206ENST00000507321 SSPOA2VEC9 5147 aa0.24□□□□□ -2.37
SNX2-206ENST00000507321 COL7A1Q02388 2944 aa0.23□□□□□ -2.37
SNX2-206ENST00000507321 C9orf92A6NGG3 77 aa0.23□□□□□ -2.37
SNX2-206ENST00000507321 FLNCQ14315 2725 aa0.23□□□□□ -2.37
SNX2-206ENST00000507321 NBASA2RRP1 2371 aa0.23□□□□□ -2.37
SNX2-206ENST00000507321 DMBT1Q9UGM3 2413 aaPredicted RBP0.22□□□□□ -2.37
SNX2-206ENST00000507321 SNRPGP15A8MWD9 76 aa0.22□□□□□ -2.37
SNX2-206ENST00000507321 PKHD1P08F94 4074 aa0.22□□□□□ -2.37
SNX2-206ENST00000507321 COL6A3P12111 3177 aa0.21□□□□□ -2.38
SNX2-206ENST00000507321 MUC2Q02817 5179 aa0.21□□□□□ -2.38
SNX2-206ENST00000507321 LRP2P98164 4655 aa0.21□□□□□ -2.38
SNX2-206ENST00000507321 IQGAP1P46940 1657 aa0.21□□□□□ -2.38
SNX2-206ENST00000507321 KIF21BO75037 1637 aa0.2□□□□□ -2.38
SNX2-206ENST00000507321 H3BNG1 76 aa0.19□□□□□ -2.38
SNX2-206ENST00000507321 SPRR2AP35326 72 aa0.19□□□□□ -2.38
SNX2-206ENST00000507321 CEP290O15078 2479 aa0.19□□□□□ -2.38
SNX2-206ENST00000507321 IGLV5-48A0A075B6I7 105 aa0.17□□□□□ -2.38
SNX2-206ENST00000507321 KRTAP6-2Q3LI66 62 aa0.17□□□□□ -2.38
SNX2-206ENST00000507321 SACSQ9NZJ4 4579 aa0.17□□□□□ -2.38
SNX2-206ENST00000507321 SPRR2GQ9BYE4 73 aa0.16□□□□□ -2.38
SNX2-206ENST00000507321 DDX60Q8IY21 1712 aaKnown RBP0.16□□□□□ -2.38
SNX2-206ENST00000507321 SPTBN4Q9H254 2564 aa0.15□□□□□ -2.38
SNX2-206ENST00000507321 NF1P21359 2839 aa0.15□□□□□ -2.38
SNX2-206ENST00000507321 NOP10Q9NPE3 64 aaKnown RBP0.15□□□□□ -2.39
SNX2-206ENST00000507321 ABRACLQ9P1F3 81 aa0.15□□□□□ -2.39
SNX2-206ENST00000507321 PKHD1L1Q86WI1 4243 aa0.14□□□□□ -2.39
SNX2-206ENST00000507321 FAM208AQ9UK61 1670 aaKnown RBP0.14□□□□□ -2.39
SNX2-206ENST00000507321 FLNAP21333 2647 aaKnown RBP0.14□□□□□ -2.39
SNX2-206ENST00000507321 DNAH3Q8TD57 4116 aa0.14□□□□□ -2.39
SNX2-206ENST00000507321 PDZD2O15018 2839 aa0.14□□□□□ -2.39
SNX2-206ENST00000507321 FLGP20930 4061 aaPredicted RBP0.13□□□□□ -2.39
SNX2-206ENST00000507321 PKD1L2Q7Z442 2459 aa0.13□□□□□ -2.39
SNX2-206ENST00000507321 ANK3Q12955 4377 aaKnown RBP0.13□□□□□ -2.39
SNX2-206ENST00000507321 CUBNO60494 3623 aa0.13□□□□□ -2.39
SNX2-206ENST00000507321 SMIM27A0A1W2PRY6 76 aa0.13□□□□□ -2.39
SNX2-206ENST00000507321 LINC01546A6NGU7 62 aa0.13□□□□□ -2.39
SNX2-206ENST00000507321 ZZEF1O43149 2961 aa0.13□□□□□ -2.39
SNX2-206ENST00000507321 DNAH9Q9NYC9 4486 aa0.13□□□□□ -2.39
SNX2-206ENST00000507321 FAT3Q8TDW7 4589 aa0.13□□□□□ -2.39
SNX2-206ENST00000507321 KAAG1Q9UBP8 84 aa0.12□□□□□ -2.39
SNX2-206ENST00000507321 TENM2Q9NT68 2774 aa0.12□□□□□ -2.39
SNX2-206ENST00000507321 SVEP1Q4LDE5 3571 aa0.11□□□□□ -2.39
SNX2-206ENST00000507321 PCLOQ9Y6V0 5065 aa0.1□□□□□ -2.39
SNX2-206ENST00000507321 SETD2Q9BYW2 2564 aaPredicted RBP0.09□□□□□ -2.4
SNX2-206ENST00000507321 STAB1Q9NY15 2570 aa0.09□□□□□ -2.4
SNX2-206ENST00000507321 IQGAP2Q13576 1575 aa0.09□□□□□ -2.4
SNX2-206ENST00000507321 SONP18583 2426 aaKnown RBP0.08□□□□□ -2.4
SNX2-206ENST00000507321 MAP1AP78559 2803 aaPredicted RBP0.08□□□□□ -2.4
SNX2-206ENST00000507321 SPRR2EP22531 72 aa0.08□□□□□ -2.4
SNX2-206ENST00000507321 TFF3Q07654 80 aa0.08□□□□□ -2.4
SNX2-206ENST00000507321 WFDC10BQ8IUB3 73 aa0.08□□□□□ -2.4
SNX2-206ENST00000507321 MUC12Q9UKN1 5478 aa0.08□□□□□ -2.4
SNX2-206ENST00000507321 APOBP04114 4563 aaKnown RBP0.08□□□□□ -2.4
SNX2-206ENST00000507321 ZANQ9Y493 2812 aa0.08□□□□□ -2.4
SNX2-206ENST00000507321 NFAT5O94916 1531 aa0.08□□□□□ -2.4
SNX2-206ENST00000507321 DMXL1Q9Y485 3027 aa0.07□□□□□ -2.4
SNX2-206ENST00000507321 GCN1Q92616 2671 aaKnown RBP0.07□□□□□ -2.4
SNX2-206ENST00000507321 MMP24-AS1A0A0U1RRL7 71 aa0.05□□□□□ -2.4
SNX2-206ENST00000507321 DNAH2Q9P225 4427 aa0.05□□□□□ -2.4
SNX2-206ENST00000507321 MT1AP04731 61 aa0.04□□□□□ -2.4
SNX2-206ENST00000507321 AKAP9Q99996 3911 aa0.04□□□□□ -2.4
SNX2-206ENST00000507321 A0A0C4DFX4 3053 aa0.03□□□□□ -2.4
SNX2-206ENST00000507321 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.4
SNX2-206ENST00000507321 TACC2O95359 2948 aa0.03□□□□□ -2.4
SNX2-206ENST00000507321 M0QY20 66 aa0.02□□□□□ -2.41
SNX2-206ENST00000507321 SMIM2Q9BVW6 85 aa0.02□□□□□ -2.41
SNX2-206ENST00000507321 HTTP42858 3142 aa0.01□□□□□ -2.41
SNX2-206ENST00000507321 DNAH11Q96DT5 4516 aa0.01□□□□□ -2.41
SNX2-206ENST00000507321 DEFB110Q30KQ9 67 aa0□□□□□ -2.41
SNX2-206ENST00000507321 ANKRD11Q6UB99 2663 aaPredicted RBP-0□□□□□ -2.41
SNX2-206ENST00000507321 SPRR2FQ96RM1 72 aa-0.01□□□□□ -2.41
SNX2-206ENST00000507321 MTORP42345 2549 aa-0.02□□□□□ -2.41
SNX2-206ENST00000507321 VPS13DQ5THJ4 4388 aa-0.02□□□□□ -2.41
SNX2-206ENST00000507321 DNAH6Q9C0G6 4158 aa-0.02□□□□□ -2.41
SNX2-206ENST00000507321 SRRM2Q9UQ35 2752 aaKnown RBP-0.02□□□□□ -2.41
SNX2-206ENST00000507321 TNP1P09430 55 aa-0.02□□□□□ -2.41
SNX2-206ENST00000507321 CLTCL1P53675 1640 aa-0.02□□□□□ -2.41
SNX2-206ENST00000507321 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.03□□□□□ -2.41
SNX2-206ENST00000507321 RYR1P21817 5038 aa-0.03□□□□□ -2.41
SNX2-206ENST00000507321 A8MTW9 85 aa-0.03□□□□□ -2.41
SNX2-206ENST00000507321 SPG11Q96JI7 2443 aa-0.03□□□□□ -2.41
SNX2-206ENST00000507321 TRPM2O94759 1503 aa-0.03□□□□□ -2.41
SNX2-206ENST00000507321 DEFB131AP59861 70 aa-0.04□□□□□ -2.42
SNX2-206ENST00000507321 TGP01266 2768 aa-0.04□□□□□ -2.42
SNX2-206ENST00000507321 RYR2Q92736 4967 aa-0.04□□□□□ -2.42
SNX2-206ENST00000507321 RANBP2P49792 3224 aaKnown RBP-0.05□□□□□ -2.42
SNX2-206ENST00000507321 TOMM5Q8N4H5 51 aa-0.05□□□□□ -2.42
SNX2-206ENST00000507321 KALRNO60229 2985 aa-0.05□□□□□ -2.42
SNX2-206ENST00000507321 SPENQ96T58 3664 aaKnown RBP-0.06□□□□□ -2.42
SNX2-206ENST00000507321 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.06□□□□□ -2.42
SNX2-206ENST00000507321 TEP1Q99973 2627 aaKnown RBP-0.06□□□□□ -2.42
SNX2-206ENST00000507321 RNF213Q63HN8 5207 aa-0.07□□□□□ -2.42
SNX2-206ENST00000507321 M0QZ58 72 aa-0.07□□□□□ -2.42
SNX2-206ENST00000507321 NBEAL1Q6ZS30 2694 aa-0.07□□□□□ -2.42
SNX2-206ENST00000507321 UBR4Q5T4S7 5183 aa-0.07□□□□□ -2.42
SNX2-206ENST00000507321 STAB2Q8WWQ8 2551 aa-0.08□□□□□ -2.42
SNX2-206ENST00000507321 HIVEP1P15822 2718 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms