RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 COX6B1P14854 86 aa1.36□□□□□ -2.19
PDE4D-215ENST00000506510 PRB3Q04118 309 aaPredicted RBP1.36□□□□□ -2.19
PDE4D-215ENST00000506510 NIPBLQ6KC79 2804 aaeCLIP1.34□□□□□ -2.19
PDE4D-215ENST00000506510 STAB1Q9NY15 2570 aa1.34□□□□□ -2.19
PDE4D-215ENST00000506510 TFF3Q07654 80 aa1.34□□□□□ -2.19
PDE4D-215ENST00000506510 MRPL34Q9BQ48 92 aaKnown RBP1.34□□□□□ -2.19
PDE4D-215ENST00000506510 UBL5Q9BZL1 73 aa1.34□□□□□ -2.19
PDE4D-215ENST00000506510 PKDREJQ9NTG1 2253 aa1.34□□□□□ -2.2
PDE4D-215ENST00000506510 NSD1Q96L73 2696 aaPredicted RBP1.34□□□□□ -2.2
PDE4D-215ENST00000506510 DCHS2Q6V1P9 2916 aa1.34□□□□□ -2.2
PDE4D-215ENST00000506510 TACC2O95359 2948 aa1.33□□□□□ -2.2
PDE4D-215ENST00000506510 CSPG4Q6UVK1 2322 aa1.33□□□□□ -2.2
PDE4D-215ENST00000506510 ACANP16112 2415 aa1.33□□□□□ -2.2
PDE4D-215ENST00000506510 BSNQ9UPA5 3926 aa1.33□□□□□ -2.2
PDE4D-215ENST00000506510 PRRC2CQ9Y520 2896 aaKnown RBP1.33□□□□□ -2.2
PDE4D-215ENST00000506510 DNHD1Q96M86 4753 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 COL6A5A8TX70 2615 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 FLNAP21333 2647 aaKnown RBP1.32□□□□□ -2.2
PDE4D-215ENST00000506510 SNRPGP15A8MWD9 76 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 SMR3AQ99954 134 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 TNCP24821 2201 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 MEGF8Q7Z7M0 2845 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 CSMD2Q7Z408 3487 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 ATRQ13535 2644 aa1.32□□□□□ -2.2
PDE4D-215ENST00000506510 USF3Q68DE3 2245 aa1.31□□□□□ -2.2
PDE4D-215ENST00000506510 NBEAL1Q6ZS30 2694 aa1.31□□□□□ -2.2
PDE4D-215ENST00000506510 DEFB110Q30KQ9 67 aa1.31□□□□□ -2.2
PDE4D-215ENST00000506510 NCBP2-AS2Q69YL0 99 aa1.31□□□□□ -2.2
PDE4D-215ENST00000506510 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
PDE4D-215ENST00000506510 CSMD1Q96PZ7 3565 aa1.31□□□□□ -2.2
PDE4D-215ENST00000506510 SPENQ96T58 3664 aaKnown RBP1.3□□□□□ -2.2
PDE4D-215ENST00000506510 Q5VSD8 79 aa1.3□□□□□ -2.2
PDE4D-215ENST00000506510 MXRA5Q9NR99 2828 aa1.3□□□□□ -2.2
PDE4D-215ENST00000506510 NBPF19A0A087WUL8 3843 aa1.3□□□□□ -2.2
PDE4D-215ENST00000506510 HRNRQ86YZ3 2850 aaPredicted RBP1.29□□□□□ -2.2
PDE4D-215ENST00000506510 DEFB108AA8MXU0 73 aa1.29□□□□□ -2.2
PDE4D-215ENST00000506510 H0YGG7 62 aa1.29□□□□□ -2.2
PDE4D-215ENST00000506510 CCL22O00626 93 aa1.29□□□□□ -2.2
PDE4D-215ENST00000506510 SPRR1AP35321 89 aa1.29□□□□□ -2.2
PDE4D-215ENST00000506510 KCNQ1DNQ9H478 68 aa1.29□□□□□ -2.2
PDE4D-215ENST00000506510 AKAP6Q13023 2319 aa1.29□□□□□ -2.2
PDE4D-215ENST00000506510 TLN2Q9Y4G6 2542 aa1.28□□□□□ -2.2
PDE4D-215ENST00000506510 FXYD6Q9H0Q3 95 aa1.28□□□□□ -2.2
PDE4D-215ENST00000506510 AKAP9Q99996 3911 aa1.28□□□□□ -2.2
PDE4D-215ENST00000506510 SONP18583 2426 aaKnown RBP1.28□□□□□ -2.2
PDE4D-215ENST00000506510 MAP1AP78559 2803 aaPredicted RBP1.28□□□□□ -2.2
PDE4D-215ENST00000506510 ZANQ9Y493 2812 aa1.28□□□□□ -2.2
PDE4D-215ENST00000506510 STATHP02808 62 aa1.27□□□□□ -2.21
PDE4D-215ENST00000506510 COX6B2Q6YFQ2 88 aa1.27□□□□□ -2.21
PDE4D-215ENST00000506510 TOMM5Q8N4H5 51 aa1.27□□□□□ -2.21
PDE4D-215ENST00000506510 SPRR1BP22528 89 aa1.26□□□□□ -2.21
PDE4D-215ENST00000506510 MGAM2Q2M2H8 2515 aa1.26□□□□□ -2.21
PDE4D-215ENST00000506510 APLNQ9ULZ1 77 aa1.25□□□□□ -2.21
PDE4D-215ENST00000506510 DEFB131BA0A096LNP1 70 aa1.24□□□□□ -2.21
PDE4D-215ENST00000506510 ETDCA0A1B0GVM5 59 aa1.24□□□□□ -2.21
PDE4D-215ENST00000506510 MRPL33O75394 65 aaKnown RBP1.24□□□□□ -2.21
PDE4D-215ENST00000506510 NDUFA3O95167 84 aa1.24□□□□□ -2.21
PDE4D-215ENST00000506510 ZNF469Q96JG9 3925 aaPredicted RBP1.24□□□□□ -2.21
PDE4D-215ENST00000506510 TGP01266 2768 aa1.23□□□□□ -2.21
PDE4D-215ENST00000506510 FCER1GP30273 86 aa1.23□□□□□ -2.21
PDE4D-215ENST00000506510 DEFB114Q30KQ6 69 aa1.23□□□□□ -2.21
PDE4D-215ENST00000506510 DEFB105AQ8NG35 78 aa1.23□□□□□ -2.21
PDE4D-215ENST00000506510 NMES1Q9C002 83 aa1.23□□□□□ -2.21
PDE4D-215ENST00000506510 ABRACLQ9P1F3 81 aa1.23□□□□□ -2.21
PDE4D-215ENST00000506510 PKD1L1Q8TDX9 2849 aa1.23□□□□□ -2.21
PDE4D-215ENST00000506510 PRH1P02810 166 aa1.22□□□□□ -2.21
PDE4D-215ENST00000506510 LELP1Q5T871 98 aa1.22□□□□□ -2.21
PDE4D-215ENST00000506510 CDKN2A-AS1Q9UH64 79 aa1.22□□□□□ -2.21
PDE4D-215ENST00000506510 NOTCH1P46531 2555 aa1.21□□□□□ -2.22
PDE4D-215ENST00000506510 SNRPGP62308 76 aaKnown RBP1.21□□□□□ -2.22
PDE4D-215ENST00000506510 H1FX-AS1Q4G0G2 97 aa1.21□□□□□ -2.22
PDE4D-215ENST00000506510 VWFP04275 2813 aa1.21□□□□□ -2.22
PDE4D-215ENST00000506510 NBEAL2Q6ZNJ1 2754 aa1.21□□□□□ -2.22
PDE4D-215ENST00000506510 CRIP1P50238 77 aa1.2□□□□□ -2.22
PDE4D-215ENST00000506510 CMC2Q9NRP2 79 aa1.2□□□□□ -2.22
PDE4D-215ENST00000506510 WNK1Q9H4A3 2382 aa1.2□□□□□ -2.22
PDE4D-215ENST00000506510 CUBNO60494 3623 aa1.19□□□□□ -2.22
PDE4D-215ENST00000506510 ANK2Q01484 3957 aa1.19□□□□□ -2.22
PDE4D-215ENST00000506510 DEFB108BQ8NET1 73 aa1.19□□□□□ -2.22
PDE4D-215ENST00000506510 LYNX1G3V0Z9 82 aa1.18□□□□□ -2.22
PDE4D-215ENST00000506510 K7EMI3 77 aa1.18□□□□□ -2.22
PDE4D-215ENST00000506510 SERF2P84101 59 aa1.18□□□□□ -2.22
PDE4D-215ENST00000506510 ANK3Q12955 4377 aaKnown RBP1.18□□□□□ -2.22
PDE4D-215ENST00000506510 TENM3Q9P273 2699 aa1.18□□□□□ -2.22
PDE4D-215ENST00000506510 KLK9Q2XQG4 91 aa1.17□□□□□ -2.22
PDE4D-215ENST00000506510 SVEP1Q4LDE5 3571 aa1.17□□□□□ -2.22
PDE4D-215ENST00000506510 VPS13CQ709C8 3753 aa1.17□□□□□ -2.22
PDE4D-215ENST00000506510 M0R1W7 72 aa1.16□□□□□ -2.22
PDE4D-215ENST00000506510 RPS27LQ71UM5 84 aaKnown RBP1.16□□□□□ -2.22
PDE4D-215ENST00000506510 KMT2CQ8NEZ4 4911 aaKnown RBP1.15□□□□□ -2.22
PDE4D-215ENST00000506510 SMIM27A0A1W2PRY6 76 aa1.15□□□□□ -2.23
PDE4D-215ENST00000506510 LINC00158P58513 81 aa1.15□□□□□ -2.23
PDE4D-215ENST00000506510 WFDC13Q8IUB5 93 aa1.15□□□□□ -2.23
PDE4D-215ENST00000506510 COL7A1Q02388 2944 aa1.15□□□□□ -2.23
PDE4D-215ENST00000506510 TRRAPQ9Y4A5 3859 aa1.15□□□□□ -2.23
PDE4D-215ENST00000506510 PRKDCP78527 4128 aaKnown RBP1.14□□□□□ -2.23
PDE4D-215ENST00000506510 RYR3Q15413 4870 aa1.14□□□□□ -2.23
PDE4D-215ENST00000506510 BIRC6Q9NR09 4857 aa1.14□□□□□ -2.23
PDE4D-215ENST00000506510 TENM2Q9NT68 2774 aa1.14□□□□□ -2.23
PDE4D-215ENST00000506510 STAB2Q8WWQ8 2551 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms