RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 Q6ZQT0 140 aa9.41□□□□□ -0.9
SMN1-204ENST00000506163 NOTCH2NLQ7Z3S9 236 aa9.4□□□□□ -0.9
SMN1-204ENST00000506163 C20orf166-AS1Q96NR2 134 aa9.39□□□□□ -0.91
SMN1-204ENST00000506163 LOC110117498A0A087WWA1 95 aa9.39□□□□□ -0.91
SMN1-204ENST00000506163 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.39□□□□□ -0.91
SMN1-204ENST00000506163 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
SMN1-204ENST00000506163 A8MUU9 505 aa9.38□□□□□ -0.91
SMN1-204ENST00000506163 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
SMN1-204ENST00000506163 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
SMN1-204ENST00000506163 KRTAP16-1A8MUX0 517 aa9.37□□□□□ -0.91
SMN1-204ENST00000506163 LINC00313P59037 77 aa9.34□□□□□ -0.91
SMN1-204ENST00000506163 ATP11AUNQ6ZP68 121 aa9.34□□□□□ -0.91
SMN1-204ENST00000506163 KRTAP9-2Q9BYQ4 174 aa9.34□□□□□ -0.91
SMN1-204ENST00000506163 IGHV6-1A0A0B4J1U7 121 aa9.31□□□□□ -0.92
SMN1-204ENST00000506163 KRTAP9-6A0A140TA67 174 aa9.31□□□□□ -0.92
SMN1-204ENST00000506163 H3BT86 120 aa9.31□□□□□ -0.92
SMN1-204ENST00000506163 PDE6GP18545 87 aa9.31□□□□□ -0.92
SMN1-204ENST00000506163 COL5A1-AS1Q5SY13 56 aa9.29□□□□□ -0.92
SMN1-204ENST00000506163 SPCS1Q9Y6A9 102 aa9.29□□□□□ -0.92
SMN1-204ENST00000506163 A0A1B0GVX0 72 aa9.28□□□□□ -0.92
SMN1-204ENST00000506163 A0A1B0GW54 56 aa9.27□□□□□ -0.93
SMN1-204ENST00000506163 MT1HP80294 61 aa9.26□□□□□ -0.93
SMN1-204ENST00000506163 J3KT08 172 aa9.24□□□□□ -0.93
SMN1-204ENST00000506163 PRO0461Q9UI25 63 aa9.22□□□□□ -0.93
SMN1-204ENST00000506163 FLGP20930 4061 aaPredicted RBP9.21□□□□□ -0.93
SMN1-204ENST00000506163 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
SMN1-204ENST00000506163 IGKV3D-7A0A0C4DH55 119 aa9.19□□□□□ -0.94
SMN1-204ENST00000506163 A8MWP4 228 aa9.18□□□□□ -0.94
SMN1-204ENST00000506163 K7EP34 96 aa9.18□□□□□ -0.94
SMN1-204ENST00000506163 NREPQ16612 68 aa9.18□□□□□ -0.94
SMN1-204ENST00000506163 NDUFB1O75438 58 aa9.14□□□□□ -0.95
SMN1-204ENST00000506163 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
SMN1-204ENST00000506163 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
SMN1-204ENST00000506163 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
SMN1-204ENST00000506163 A0A1B0GV90 55 aa9.11□□□□□ -0.95
SMN1-204ENST00000506163 Q8N9P0 234 aaPredicted RBP9.11□□□□□ -0.95
SMN1-204ENST00000506163 K7EQZ3 153 aa9.06□□□□□ -0.96
SMN1-204ENST00000506163 LCE3BQ5TA77 95 aa9.06□□□□□ -0.96
SMN1-204ENST00000506163 Q6ZVQ6 151 aa9.06□□□□□ -0.96
SMN1-204ENST00000506163 ZCCHC13Q8WW36 166 aaKnown RBP9.06□□□□□ -0.96
SMN1-204ENST00000506163 MMP24-AS1A0A0U1RRL7 71 aa9.05□□□□□ -0.96
SMN1-204ENST00000506163 HRES1P13985 223 aa9.05□□□□□ -0.96
SMN1-204ENST00000506163 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
SMN1-204ENST00000506163 MPLKIPQ8TAP9 179 aa9.04□□□□□ -0.96
SMN1-204ENST00000506163 BPY2O14599 106 aa9.03□□□□□ -0.96
SMN1-204ENST00000506163 GTF2H5Q6ZYL4 71 aa9.03□□□□□ -0.96
SMN1-204ENST00000506163 LINC00846Q9NV44 126 aa9.02□□□□□ -0.97
SMN1-204ENST00000506163 M0R2T5 61 aa9.01□□□□□ -0.97
SMN1-204ENST00000506163 Q8N9L7 120 aa9□□□□□ -0.97
SMN1-204ENST00000506163 F8W1H4 67 aa8.99□□□□□ -0.97
SMN1-204ENST00000506163 TMEM254Q8TBM7 123 aa8.98□□□□□ -0.97
SMN1-204ENST00000506163 MRPL34Q9BQ48 92 aaKnown RBP8.98□□□□□ -0.97
SMN1-204ENST00000506163 ETDBQ3ZM63 59 aa8.97□□□□□ -0.97
SMN1-204ENST00000506163 hDV103S1A0JD37 113 aa8.97□□□□□ -0.97
SMN1-204ENST00000506163 SPINK7P58062 85 aa8.97□□□□□ -0.97
SMN1-204ENST00000506163 KRTAP4-8A0A0G2JLE6 195 aa8.93□□□□□ -0.98
SMN1-204ENST00000506163 UBL5Q9BZL1 73 aa8.91□□□□□ -0.98
SMN1-204ENST00000506163 WFDC13Q8IUB5 93 aa8.9□□□□□ -0.98
SMN1-204ENST00000506163 RBM12B-AS1Q9P1G2 102 aa8.89□□□□□ -0.99
SMN1-204ENST00000506163 FAM236DA0A1B0GTK5 79 aa8.88□□□□□ -0.99
SMN1-204ENST00000506163 FAM236CP0DP71 79 aa8.88□□□□□ -0.99
SMN1-204ENST00000506163 C5orf47Q569G3 176 aa8.88□□□□□ -0.99
SMN1-204ENST00000506163 NDUFS5O43920 106 aa8.87□□□□□ -0.99
SMN1-204ENST00000506163 SCGB1A1P11684 91 aa8.87□□□□□ -0.99
SMN1-204ENST00000506163 Q5W150 140 aa8.87□□□□□ -0.99
SMN1-204ENST00000506163 KRTAP9-9Q9BYP9 154 aa8.87□□□□□ -0.99
SMN1-204ENST00000506163 KRTAP9-4Q9BYQ2 154 aa8.87□□□□□ -0.99
SMN1-204ENST00000506163 CASC2Q6XLA1 102 aa8.86□□□□□ -0.99
SMN1-204ENST00000506163 KRTAP9-8Q9BYQ0 159 aa8.82□□□□□ -1
SMN1-204ENST00000506163 HCG22E2RYF7 251 aa8.8□□□□□ -1
SMN1-204ENST00000506163 CXCL6P80162 114 aa8.76□□□□□ -1.01
SMN1-204ENST00000506163 SEC61GP60059 68 aa8.74□□□□□ -1.01
SMN1-204ENST00000506163 KRTAP4-12Q9BQ66 201 aa8.74□□□□□ -1.01
SMN1-204ENST00000506163 IGKV2D-30A0A075B6S6 120 aa8.73□□□□□ -1.01
SMN1-204ENST00000506163 IGKV2-30P06310 120 aa8.73□□□□□ -1.01
SMN1-204ENST00000506163 FSIP2Q5CZC0 6907 aa8.71□□□□□ -1.01
SMN1-204ENST00000506163 MT2AP02795 61 aa8.69□□□□□ -1.02
SMN1-204ENST00000506163 ACYP1P07311 99 aa8.68□□□□□ -1.02
SMN1-204ENST00000506163 C7orf65Q6ZTY9 151 aa8.68□□□□□ -1.02
SMN1-204ENST00000506163 KRTAP4-7Q9BYR0 210 aa8.68□□□□□ -1.02
SMN1-204ENST00000506163 FAM240AA0A1B0GVK7 77 aa8.67□□□□□ -1.02
SMN1-204ENST00000506163 MT1FP04733 61 aa8.63□□□□□ -1.03
SMN1-204ENST00000506163 CRCT1Q9UGL9 99 aa8.63□□□□□ -1.03
SMN1-204ENST00000506163 H1FX-AS1Q4G0G2 97 aa8.61□□□□□ -1.03
SMN1-204ENST00000506163 C4orf26Q17RF5 130 aa8.59□□□□□ -1.03
SMN1-204ENST00000506163 TP53AIP1Q9HCN2 124 aa8.59□□□□□ -1.03
SMN1-204ENST00000506163 K7ERU9 68 aa8.57□□□□□ -1.04
SMN1-204ENST00000506163 ATP5EP2Q5VTU8 51 aa8.56□□□□□ -1.04
SMN1-204ENST00000506163 KRTAP3-1Q9BYR8 98 aa8.54□□□□□ -1.04
SMN1-204ENST00000506163 KRTAP10-10P60014 251 aa8.54□□□□□ -1.04
SMN1-204ENST00000506163 KRTAP9-3Q9BYQ3 159 aa8.54□□□□□ -1.04
SMN1-204ENST00000506163 USH2AO75445 5202 aa8.53□□□□□ -1.04
SMN1-204ENST00000506163 HIST1H4AP62805 103 aaKnown RBP8.52□□□□□ -1.05
SMN1-204ENST00000506163 LINC00643Q86TS7 51 aa8.51□□□□□ -1.05
SMN1-204ENST00000506163 A0A087WVE0 104 aa8.49□□□□□ -1.05
SMN1-204ENST00000506163 CYP4F30PQ9H0H9 118 aa8.46□□□□□ -1.06
SMN1-204ENST00000506163 SMIM20Q8N5G0 67 aa8.45□□□□□ -1.06
SMN1-204ENST00000506163 LCE1DQ5T752 114 aa8.44□□□□□ -1.06
SMN1-204ENST00000506163 TRAV22A0A0B4J277 110 aa8.43□□□□□ -1.06
SMN1-204ENST00000506163 C1orf64Q8NEQ6 169 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms