RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 PRO0628Q9UI54 55 aa11.49□□□□□ -0.57
SDHA-206ENST00000505555 A0A087X002 238 aa11.48□□□□□ -0.57
SDHA-206ENST00000505555 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
SDHA-206ENST00000505555 ASB16-AS1Q495Z4 193 aa11.48□□□□□ -0.57
SDHA-206ENST00000505555 NOTCH2NLQ7Z3S9 236 aa11.48□□□□□ -0.57
SDHA-206ENST00000505555 SPINK6Q6UWN8 80 aa11.48□□□□□ -0.57
SDHA-206ENST00000505555 Q6ZSA8 131 aa11.47□□□□□ -0.57
SDHA-206ENST00000505555 SPANXA2-OT1Q8N9U9 137 aa11.44□□□□□ -0.58
SDHA-206ENST00000505555 Q1T7F1 81 aa11.44□□□□□ -0.58
SDHA-206ENST00000505555 NDUFS5O43920 106 aa11.43□□□□□ -0.58
SDHA-206ENST00000505555 SSBP3-AS1Q7Z2R9 100 aa11.4□□□□□ -0.58
SDHA-206ENST00000505555 VPS13BQ7Z7G8 4022 aa11.38□□□□□ -0.59
SDHA-206ENST00000505555 KRTAP13-2Q52LG2 175 aa11.38□□□□□ -0.59
SDHA-206ENST00000505555 TP53AIP1Q9HCN2 124 aa11.38□□□□□ -0.59
SDHA-206ENST00000505555 MRPL34Q9BQ48 92 aaKnown RBP11.37□□□□□ -0.59
SDHA-206ENST00000505555 CD164Q04900 197 aa11.37□□□□□ -0.59
SDHA-206ENST00000505555 BRK1Q8WUW1 75 aa11.35□□□□□ -0.59
SDHA-206ENST00000505555 PKHD1P08F94 4074 aa11.33□□□□□ -0.6
SDHA-206ENST00000505555 PCOTHQ58A44 107 aa11.32□□□□□ -0.6
SDHA-206ENST00000505555 SACSQ9NZJ4 4579 aa11.32□□□□□ -0.6
SDHA-206ENST00000505555 KRTAP1-4P0C5Y4 121 aa11.28□□□□□ -0.6
SDHA-206ENST00000505555 IGLV7-46A0A075B6I9 117 aa11.28□□□□□ -0.6
SDHA-206ENST00000505555 Q5W150 140 aa11.24□□□□□ -0.61
SDHA-206ENST00000505555 V9GYY9 64 aa11.24□□□□□ -0.61
SDHA-206ENST00000505555 PSPHP1O15172 72 aa11.23□□□□□ -0.61
SDHA-206ENST00000505555 C1orf195Q5TG92 126 aa11.23□□□□□ -0.61
SDHA-206ENST00000505555 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
SDHA-206ENST00000505555 Q8N9P0 234 aaPredicted RBP11.2□□□□□ -0.62
SDHA-206ENST00000505555 A8MUN3 132 aa11.18□□□□□ -0.62
SDHA-206ENST00000505555 LINC00313P59037 77 aa11.18□□□□□ -0.62
SDHA-206ENST00000505555 C8orf87E5RJ46 101 aa11.17□□□□□ -0.62
SDHA-206ENST00000505555 COA5Q86WW8 74 aa11.17□□□□□ -0.62
SDHA-206ENST00000505555 KRTAP13-3Q3SY46 172 aa11.15□□□□□ -0.62
SDHA-206ENST00000505555 DYNC1H1Q14204 4646 aaKnown RBP11.15□□□□□ -0.62
SDHA-206ENST00000505555 Q5VV11 94 aa11.14□□□□□ -0.63
SDHA-206ENST00000505555 TYMSOSQ8TAI1 123 aa11.13□□□□□ -0.63
SDHA-206ENST00000505555 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
SDHA-206ENST00000505555 SMR3BP02814 79 aaPredicted RBP11.12□□□□□ -0.63
SDHA-206ENST00000505555 RETNLBQ9BQ08 111 aa11.12□□□□□ -0.63
SDHA-206ENST00000505555 LOC101927531A0A1B0GV80 90 aa11.09□□□□□ -0.63
SDHA-206ENST00000505555 C4orf48Q5BLP8 95 aa11.09□□□□□ -0.63
SDHA-206ENST00000505555 PRR26Q8N8Z3 221 aa11.06□□□□□ -0.64
SDHA-206ENST00000505555 KRTAP16-1A8MUX0 517 aa11.04□□□□□ -0.64
SDHA-206ENST00000505555 FAT1Q14517 4588 aa11.03□□□□□ -0.64
SDHA-206ENST00000505555 PRR15LQ9BU68 103 aa11.03□□□□□ -0.64
SDHA-206ENST00000505555 HRES1P13985 223 aa11.02□□□□□ -0.65
SDHA-206ENST00000505555 SPINK1P00995 79 aa11.01□□□□□ -0.65
SDHA-206ENST00000505555 A0A1B0GVY2 172 aa11.01□□□□□ -0.65
SDHA-206ENST00000505555 APOBP04114 4563 aaKnown RBP11□□□□□ -0.65
SDHA-206ENST00000505555 FAM229AH3BQW9 127 aa11□□□□□ -0.65
SDHA-206ENST00000505555 RYR2Q92736 4967 aa10.97□□□□□ -0.65
SDHA-206ENST00000505555 CHKB-CPT1BH3BT56 60 aa10.97□□□□□ -0.65
SDHA-206ENST00000505555 Q75L30 129 aa10.97□□□□□ -0.65
SDHA-206ENST00000505555 LINC00304Q8N9R0 145 aa10.96□□□□□ -0.65
SDHA-206ENST00000505555 LINC01558Q9Y6Z2 57 aa10.96□□□□□ -0.65
SDHA-206ENST00000505555 A8MU10 97 aa10.96□□□□□ -0.66
SDHA-206ENST00000505555 KMT2CQ8NEZ4 4911 aaKnown RBP10.94□□□□□ -0.66
SDHA-206ENST00000505555 IGKV2-30P06310 120 aa10.91□□□□□ -0.66
SDHA-206ENST00000505555 SPAG11AQ6PDA7 123 aa10.91□□□□□ -0.66
SDHA-206ENST00000505555 KRTAP10-4P60372 401 aaPredicted RBP10.9□□□□□ -0.66
SDHA-206ENST00000505555 IGKV2D-30A0A075B6S6 120 aa10.85□□□□□ -0.67
SDHA-206ENST00000505555 LCA10Q71F78 164 aa10.85□□□□□ -0.67
SDHA-206ENST00000505555 ACYP2P14621 99 aa10.83□□□□□ -0.68
SDHA-206ENST00000505555 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
SDHA-206ENST00000505555 PKHD1L1Q86WI1 4243 aa10.82□□□□□ -0.68
SDHA-206ENST00000505555 A6NED7 52 aa10.82□□□□□ -0.68
SDHA-206ENST00000505555 DMAC1Q96GE9 116 aa10.81□□□□□ -0.68
SDHA-206ENST00000505555 PMAIP1Q13794 54 aa10.76□□□□□ -0.69
SDHA-206ENST00000505555 CDC42SE1Q9NRR8 79 aa10.76□□□□□ -0.69
SDHA-206ENST00000505555 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
SDHA-206ENST00000505555 ATP11AUNQ6ZP68 121 aa10.73□□□□□ -0.69
SDHA-206ENST00000505555 SPINK7P58062 85 aa10.72□□□□□ -0.69
SDHA-206ENST00000505555 SPTSSBQ8NFR3 76 aa10.67□□□□□ -0.7
SDHA-206ENST00000505555 C7orf65Q6ZTY9 151 aa10.65□□□□□ -0.7
SDHA-206ENST00000505555 LRP1Q07954 4544 aaKnown RBP10.62□□□□□ -0.71
SDHA-206ENST00000505555 RYR3Q15413 4870 aa10.62□□□□□ -0.71
SDHA-206ENST00000505555 A6NN06 94 aa10.61□□□□□ -0.71
SDHA-206ENST00000505555 A8MUU9 505 aa10.6□□□□□ -0.71
SDHA-206ENST00000505555 HSPG2P98160 4391 aa10.59□□□□□ -0.71
SDHA-206ENST00000505555 Q8N1X5 172 aa10.59□□□□□ -0.71
SDHA-206ENST00000505555 C20orf166-AS1Q96NR2 134 aa10.59□□□□□ -0.71
SDHA-206ENST00000505555 TNXBP22105 4242 aa10.55□□□□□ -0.72
SDHA-206ENST00000505555 FLG2Q5D862 2391 aaPredicted RBP10.55□□□□□ -0.72
SDHA-206ENST00000505555 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.72
SDHA-206ENST00000505555 Q5VSD8 79 aa10.52□□□□□ -0.73
SDHA-206ENST00000505555 KTN1-AS1Q86SY8 53 aa10.52□□□□□ -0.73
SDHA-206ENST00000505555 A0A1B0GU69 56 aa10.5□□□□□ -0.73
SDHA-206ENST00000505555 KRTAP10-8P60410 259 aa10.47□□□□□ -0.73
SDHA-206ENST00000505555 RYR1P21817 5038 aa10.46□□□□□ -0.74
SDHA-206ENST00000505555 KRTAP17-1Q9BYP8 105 aa10.46□□□□□ -0.74
SDHA-206ENST00000505555 SEC61GP60059 68 aa10.42□□□□□ -0.74
SDHA-206ENST00000505555 SPATA8Q6RVD6 105 aa10.4□□□□□ -0.74
SDHA-206ENST00000505555 KRTAP3-1Q9BYR8 98 aa10.39□□□□□ -0.75
SDHA-206ENST00000505555 KIAA1109Q2LD37 5005 aa10.37□□□□□ -0.75
SDHA-206ENST00000505555 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
SDHA-206ENST00000505555 MYCBP2O75592 4640 aa10.33□□□□□ -0.76
SDHA-206ENST00000505555 UQCR11O14957 56 aa10.32□□□□□ -0.76
SDHA-206ENST00000505555 MIR22HGQ0VDD5 57 aa10.3□□□□□ -0.76
SDHA-206ENST00000505555 RBM12B-AS1Q9P1G2 102 aa10.25□□□□□ -0.77
SDHA-206ENST00000505555 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms