RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 PSPHP1O15172 72 aa10.06□□□□□ -0.8
LIN54-204ENST00000505397 KRTAP10-1P60331 282 aa10.06□□□□□ -0.8
LIN54-204ENST00000505397 FAT2Q9NYQ8 4349 aa10.05□□□□□ -0.8
LIN54-204ENST00000505397 Q6ZSA8 131 aa10.05□□□□□ -0.8
LIN54-204ENST00000505397 ANAPC11Q9NYG5 84 aa10.04□□□□□ -0.8
LIN54-204ENST00000505397 IGHV6-1A0A0B4J1U7 121 aa10.03□□□□□ -0.8
LIN54-204ENST00000505397 IGLV7-43P04211 117 aa10.02□□□□□ -0.81
LIN54-204ENST00000505397 PKD1P98161 4303 aa10.02□□□□□ -0.81
LIN54-204ENST00000505397 SACSQ9NZJ4 4579 aa10.02□□□□□ -0.81
LIN54-204ENST00000505397 Q8N9P0 234 aaPredicted RBP10.02□□□□□ -0.81
LIN54-204ENST00000505397 A8MUN3 132 aa10□□□□□ -0.81
LIN54-204ENST00000505397 MRPL34Q9BQ48 92 aaKnown RBP10□□□□□ -0.81
LIN54-204ENST00000505397 CD164Q04900 197 aa10□□□□□ -0.81
LIN54-204ENST00000505397 C1orf195Q5TG92 126 aa10□□□□□ -0.81
LIN54-204ENST00000505397 A0A087X002 238 aa9.98□□□□□ -0.81
LIN54-204ENST00000505397 CDK2AP2O75956 126 aa9.98□□□□□ -0.81
LIN54-204ENST00000505397 Q5VV11 94 aa9.98□□□□□ -0.81
LIN54-204ENST00000505397 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
LIN54-204ENST00000505397 COA5Q86WW8 74 aa9.98□□□□□ -0.81
LIN54-204ENST00000505397 LIMD2Q9BT23 127 aa9.97□□□□□ -0.81
LIN54-204ENST00000505397 PCOTHQ58A44 107 aa9.97□□□□□ -0.81
LIN54-204ENST00000505397 NDUFS5O43920 106 aa9.94□□□□□ -0.82
LIN54-204ENST00000505397 KRTAP13-3Q3SY46 172 aa9.89□□□□□ -0.83
LIN54-204ENST00000505397 LOC101927531A0A1B0GV80 90 aa9.88□□□□□ -0.83
LIN54-204ENST00000505397 PRR15LQ9BU68 103 aa9.86□□□□□ -0.83
LIN54-204ENST00000505397 SSBP3-AS1Q7Z2R9 100 aa9.86□□□□□ -0.83
LIN54-204ENST00000505397 Q5W150 140 aa9.85□□□□□ -0.83
LIN54-204ENST00000505397 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
LIN54-204ENST00000505397 Q75L30 129 aa9.84□□□□□ -0.83
LIN54-204ENST00000505397 LRP1BQ9NZR2 4599 aa9.83□□□□□ -0.84
LIN54-204ENST00000505397 A0A1B0GVY2 172 aa9.83□□□□□ -0.84
LIN54-204ENST00000505397 CHKB-CPT1BH3BT56 60 aa9.83□□□□□ -0.84
LIN54-204ENST00000505397 HRES1P13985 223 aa9.83□□□□□ -0.84
LIN54-204ENST00000505397 PKHD1P08F94 4074 aa9.83□□□□□ -0.84
LIN54-204ENST00000505397 A8MU10 97 aa9.81□□□□□ -0.84
LIN54-204ENST00000505397 C8orf87E5RJ46 101 aa9.81□□□□□ -0.84
LIN54-204ENST00000505397 LINC01558Q9Y6Z2 57 aa9.81□□□□□ -0.84
LIN54-204ENST00000505397 RYR2Q92736 4967 aa9.79□□□□□ -0.84
LIN54-204ENST00000505397 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
LIN54-204ENST00000505397 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
LIN54-204ENST00000505397 KRTAP13-2Q52LG2 175 aa9.73□□□□□ -0.85
LIN54-204ENST00000505397 LCA10Q71F78 164 aa9.73□□□□□ -0.85
LIN54-204ENST00000505397 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
LIN54-204ENST00000505397 DYNC1H1Q14204 4646 aaKnown RBP9.73□□□□□ -0.85
LIN54-204ENST00000505397 LINC00313P59037 77 aa9.71□□□□□ -0.86
LIN54-204ENST00000505397 SMR3BP02814 79 aaPredicted RBP9.7□□□□□ -0.86
LIN54-204ENST00000505397 PMAIP1Q13794 54 aa9.7□□□□□ -0.86
LIN54-204ENST00000505397 A6NED7 52 aa9.69□□□□□ -0.86
LIN54-204ENST00000505397 KRTAP1-4P0C5Y4 121 aa9.69□□□□□ -0.86
LIN54-204ENST00000505397 FAM229AH3BQW9 127 aa9.67□□□□□ -0.86
LIN54-204ENST00000505397 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
LIN54-204ENST00000505397 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
LIN54-204ENST00000505397 ACYP2P14621 99 aa9.65□□□□□ -0.86
LIN54-204ENST00000505397 ATP11AUNQ6ZP68 121 aa9.65□□□□□ -0.86
LIN54-204ENST00000505397 KRTAP16-1A8MUX0 517 aa9.64□□□□□ -0.87
LIN54-204ENST00000505397 DMAC1Q96GE9 116 aa9.64□□□□□ -0.87
LIN54-204ENST00000505397 PRR26Q8N8Z3 221 aa9.64□□□□□ -0.87
LIN54-204ENST00000505397 APOBP04114 4563 aaKnown RBP9.61□□□□□ -0.87
LIN54-204ENST00000505397 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
LIN54-204ENST00000505397 TYMSOSQ8TAI1 123 aa9.61□□□□□ -0.87
LIN54-204ENST00000505397 SPINK7P58062 85 aa9.58□□□□□ -0.88
LIN54-204ENST00000505397 C4orf48Q5BLP8 95 aa9.58□□□□□ -0.88
LIN54-204ENST00000505397 SPTSSBQ8NFR3 76 aa9.56□□□□□ -0.88
LIN54-204ENST00000505397 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
LIN54-204ENST00000505397 A6NN06 94 aa9.53□□□□□ -0.88
LIN54-204ENST00000505397 KRTAP10-4P60372 401 aaPredicted RBP9.53□□□□□ -0.88
LIN54-204ENST00000505397 FAT1Q14517 4588 aa9.52□□□□□ -0.89
LIN54-204ENST00000505397 SPINK1P00995 79 aa9.5□□□□□ -0.89
LIN54-204ENST00000505397 RYR3Q15413 4870 aa9.5□□□□□ -0.89
LIN54-204ENST00000505397 LINC00304Q8N9R0 145 aa9.48□□□□□ -0.89
LIN54-204ENST00000505397 KTN1-AS1Q86SY8 53 aa9.48□□□□□ -0.89
LIN54-204ENST00000505397 SEC61GP60059 68 aa9.45□□□□□ -0.9
LIN54-204ENST00000505397 IGKV2D-30A0A075B6S6 120 aa9.41□□□□□ -0.9
LIN54-204ENST00000505397 RPS29P62273 56 aaKnown RBP9.41□□□□□ -0.9
LIN54-204ENST00000505397 Q5VSD8 79 aa9.4□□□□□ -0.91
LIN54-204ENST00000505397 A0A1B0GU69 56 aa9.38□□□□□ -0.91
LIN54-204ENST00000505397 C7orf65Q6ZTY9 151 aa9.33□□□□□ -0.92
LIN54-204ENST00000505397 HSPG2P98160 4391 aa9.33□□□□□ -0.92
LIN54-204ENST00000505397 SPATA8Q6RVD6 105 aa9.31□□□□□ -0.92
LIN54-204ENST00000505397 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
LIN54-204ENST00000505397 RYR1P21817 5038 aa9.28□□□□□ -0.92
LIN54-204ENST00000505397 UQCR11O14957 56 aa9.24□□□□□ -0.93
LIN54-204ENST00000505397 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
LIN54-204ENST00000505397 MIR22HGQ0VDD5 57 aa9.21□□□□□ -0.94
LIN54-204ENST00000505397 Q8N1X5 172 aa9.2□□□□□ -0.94
LIN54-204ENST00000505397 A8MUU9 505 aa9.19□□□□□ -0.94
LIN54-204ENST00000505397 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
LIN54-204ENST00000505397 KIAA1109Q2LD37 5005 aa9.19□□□□□ -0.94
LIN54-204ENST00000505397 KRTAP10-8P60410 259 aa9.18□□□□□ -0.94
LIN54-204ENST00000505397 FLG2Q5D862 2391 aaPredicted RBP9.17□□□□□ -0.94
LIN54-204ENST00000505397 LRP1Q07954 4544 aaKnown RBP9.16□□□□□ -0.94
LIN54-204ENST00000505397 EPPK1P58107 5090 aaKnown RBP9.15□□□□□ -0.94
LIN54-204ENST00000505397 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.94
LIN54-204ENST00000505397 C9orf92A6NGG3 77 aa9.12□□□□□ -0.95
LIN54-204ENST00000505397 TNXBP22105 4242 aa9.11□□□□□ -0.95
LIN54-204ENST00000505397 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
LIN54-204ENST00000505397 FAT3Q8TDW7 4589 aa9.07□□□□□ -0.96
LIN54-204ENST00000505397 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
LIN54-204ENST00000505397 ADM2Q7Z4H4 148 aa9.02□□□□□ -0.97
LIN54-204ENST00000505397 PRAC1Q96KF2 57 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms